FFCP PHASE1:Mm9::chr3:67268056..67268089,-: Difference between revisions
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{{FFCP|EntrezGene=17035|HGNC=|MCL_coexpression_id=24|UniProt=P70202|association_with_transcript=-208bp_to_ENSMUST00000058981_5end|description=CAGE_peak_5_at_Lxn_5end|id=chr3:67268056..67268089,-|ontology_enrichment_celltype=CL:0000239!4.54e-07!6;CL:0000677!4.54e-07!6;CL:0000212!4.54e-07!6;CL:0000584!4.54e-07!6|ontology_enrichment_celltype_v019_2=CL:0000239,1.58e-19,6;CL:0000677,1.58e-19,6;CL:0000584,1.58e-19,6;CL:0000075,1.19e-16,7;CL:0002563,8.29e-13,9;CL:0002251,8.29e-13,9;CL:0000682,9.64e-11,3;CL:0000066,2.60e-09,25;CL:0002076,2.04e-07,15|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!5.37e-09!43;UBERON:0000344!2.14e-07!15|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.17e-26,31;UBERON:0000344,7.58e-25,15;UBERON:0001242,2.28e-19,13;UBERON:0001262,2.28e-19,13;UBERON:0004786,2.28e-19,13;UBERON:0005409,3.41e-16,47;UBERON:0004923,1.03e-14,24;UBERON:0002108,2.62e-13,4;UBERON:0003350,8.29e-13,9;UBERON:0004808,8.29e-13,9;UBERON:0001277,8.29e-13,9;UBERON:0000331,1.04e-10,3;UBERON:0002116,1.04e-10,3;UBERON:0001204,1.04e-10,3;UBERON:0001168,1.04e-10,3;UBERON:0000485,2.33e-10,11;UBERON:0001962,1.68e-07,2;UBERON:0001961,1.68e-07,2;UBERON:0001744,1.68e-07,2|phase1_expression=0,15.3549179361319,16.8349718574128,16.9379958331825,16.5295590882295,1.34303417529512,2.10251376535973,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,6.71968175732308,5.73523202667925,16.0784949952206,12.0613358924541,8.40337807474967,16.1519906537918,13.6096270070363,4.8780712344167,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.304130793658544,1.10128051297009,0,0,0,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,0.404632921719196,0,1.26766280701236,1.0165335962074,0,0,0,0,0.599200221036809,0.384218305321555,0,0.135005938331691,0,1.42825492201902,0.662605622854841,0,0.0958454710182364,0,0,0,0.307213066512487,0.527545150920775,0.548925861614458,0,0.279182999001381,0.56276261003168,0.15279824777681,0.883885756421003,0.284743361598206,0.372798891650601,0.151452386666368,0.0755715601067855,0,0,0,0,0,0,1.12355536105401,0,0,0,0,0,0,0,0,0,0,3.53970027129086,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0.125654352112864,0.173824320192276,0,0.20778804455956,0.162241263067758,0.203678727700633,0,0,0,0,0.229902104433473,0,0.30140963567143,0.136072998302656,0,0,0,0,0.378212160335639,0,0.219195732427575,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0.164167464079095,0,0,0,0,0,0.92614151141356,0,0,0,0,0.515469845288373,2.21851877085677,1.55664630691409,1.14135375667535,0.474529061544512,3.78807595865225,2.26201687920243,4.37704238490532,2.33956904542944,0,0.864552199498777,0.796565093017469,0,0,0,0.203651327845314,0.387904974335251,0.631222379012867,0.569128834118316,0.738050739898011,0.941992367048249,0.370191491765402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,1.29214146584111,0,0.356497378384721,0.316036757935816,0,0,0,0,0.129358683782755,0.214337035031592,0,0,0.822745103010605,0.304464949114599,0.23467170806371,0,0,0,0,0,0,0,1.45740418314925,0.18542530201051,0,0,0,0,0,0,0.169978429993855,0,0,0,0,0,0.108005340821801,0.209088296014469,0.218362563746178,0.269728692769641,0,0,0,0,0.56369293868419,0,0,0,0.129159823477731,0,0,0.13020438484395,0.104859344425711,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171853182343688,0,0.755393897389701,0,0,0,0,0,0,0,0,0,0.367687016900028,0.222246727801615,0.206035057238894,0.320919209591815,0,0.25347929989024,0.188626341386076,0.280924522409647,0.0640251524048693,0.34461281373368,0,0.231768651889711,0.192909220463705,0,0.147198920134397,0.685738504770831,0,0.715308569841963,0,0,0.25384382367503,0.182927972872773,0,0.407412341537585,0,0.118635018124174,0,0.409231043169689,0.309873682371932,0.385813221962283,0,0.467863216890817,0.429742108096597,0,0,0|short_description=p5@Lxn}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=17035 | |||
|HGNC= | |||
|MCL_coexpression_id=24 | |||
|TSSclassifier=NA | |||
|UniProt=P70202 | |||
|association_with_transcript=-208bp_to_ENSMUST00000058981_5end | |||
|cluster_id=chr3:67268056..67268089,- | |||
|description=CAGE_peak_5_at_Lxn_5end | |||
|id=chr3:67268056..67268089,- | |||
|ontology_enrichment_celltype=CL:0000239!4.54e-07!6;CL:0000677!4.54e-07!6;CL:0000212!4.54e-07!6;CL:0000584!4.54e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.58e-19,6;CL:0000677,1.58e-19,6;CL:0000584,1.58e-19,6;CL:0000075,1.19e-16,7;CL:0002563,8.29e-13,9;CL:0002251,8.29e-13,9;CL:0000682,9.64e-11,3;CL:0000066,2.60e-09,25;CL:0002076,2.04e-07,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!5.37e-09!43;UBERON:0000344!2.14e-07!15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.17e-26,31;UBERON:0000344,7.58e-25,15;UBERON:0001242,2.28e-19,13;UBERON:0001262,2.28e-19,13;UBERON:0004786,2.28e-19,13;UBERON:0005409,3.41e-16,47;UBERON:0004923,1.03e-14,24;UBERON:0002108,2.62e-13,4;UBERON:0003350,8.29e-13,9;UBERON:0004808,8.29e-13,9;UBERON:0001277,8.29e-13,9;UBERON:0000331,1.04e-10,3;UBERON:0002116,1.04e-10,3;UBERON:0001204,1.04e-10,3;UBERON:0001168,1.04e-10,3;UBERON:0000485,2.33e-10,11;UBERON:0001962,1.68e-07,2;UBERON:0001961,1.68e-07,2;UBERON:0001744,1.68e-07,2 | |||
|phase1_expression=0,15.3549179361319,16.8349718574128,16.9379958331825,16.5295590882295,1.34303417529512,2.10251376535973,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,6.71968175732308,5.73523202667925,16.0784949952206,12.0613358924541,8.40337807474967,16.1519906537918,13.6096270070363,4.8780712344167,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.304130793658544,1.10128051297009,0,0,0,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,0.404632921719196,0,1.26766280701236,1.0165335962074,0,0,0,0,0.599200221036809,0.384218305321555,0,0.135005938331691,0,1.42825492201902,0.662605622854841,0,0.0958454710182364,0,0,0,0.307213066512487,0.527545150920775,0.548925861614458,0,0.279182999001381,0.56276261003168,0.15279824777681,0.883885756421003,0.284743361598206,0.372798891650601,0.151452386666368,0.0755715601067855,0,0,0,0,0,0,1.12355536105401,0,0,0,0,0,0,0,0,0,0,3.53970027129086,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0.125654352112864,0.173824320192276,0,0.20778804455956,0.162241263067758,0.203678727700633,0,0,0,0,0.229902104433473,0,0.30140963567143,0.136072998302656,0,0,0,0,0.378212160335639,0,0.219195732427575,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0.164167464079095,0,0,0,0,0,0.92614151141356,0,0,0,0,0.515469845288373,2.21851877085677,1.55664630691409,1.14135375667535,0.474529061544512,3.78807595865225,2.26201687920243,4.37704238490532,2.33956904542944,0,0.864552199498777,0.796565093017469,0,0,0,0.203651327845314,0.387904974335251,0.631222379012867,0.569128834118316,0.738050739898011,0.941992367048249,0.370191491765402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,1.29214146584111,0,0.356497378384721,0.316036757935816,0,0,0,0,0.129358683782755,0.214337035031592,0,0,0.822745103010605,0.304464949114599,0.23467170806371,0,0,0,0,0,0,0,1.45740418314925,0.18542530201051,0,0,0,0,0,0,0.169978429993855,0,0,0,0,0,0.108005340821801,0.209088296014469,0.218362563746178,0.269728692769641,0,0,0,0,0.56369293868419,0,0,0,0.129159823477731,0,0,0.13020438484395,0.104859344425711,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171853182343688,0,0.755393897389701,0,0,0,0,0,0,0,0,0,0.367687016900028,0.222246727801615,0.206035057238894,0.320919209591815,0,0.25347929989024,0.188626341386076,0.280924522409647,0.0640251524048693,0.34461281373368,0,0.231768651889711,0.192909220463705,0,0.147198920134397,0.685738504770831,0,0.715308569841963,0,0,0.25384382367503,0.182927972872773,0,0.407412341537585,0,0.118635018124174,0,0.409231043169689,0.309873682371932,0.385813221962283,0,0.467863216890817,0.429742108096597,0,0,0 | |||
|short_description=p5@Lxn | |||
}} |
Latest revision as of 16:06, 25 September 2015
Short description: | p5@Lxn |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Lxn_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | -208bp_to_ENSMUST00000058981_5end |
EntrezGene: | Lxn |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.58e-19 | 6 |
gut absorptive cell | 1.58e-19 | 6 |
enterocyte | 1.58e-19 | 6 |
columnar/cuboidal epithelial cell | 1.19e-16 | 7 |
intestinal epithelial cell | 8.29e-13 | 9 |
epithelial cell of alimentary canal | 8.29e-13 | 9 |
M cell of gut | 9.64e-11 | 3 |
epithelial cell | 2.60e-09 | 25 |
endo-epithelial cell | 2.04e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.17e-26 | 31 |
mucosa | 7.58e-25 | 15 |
intestinal mucosa | 2.28e-19 | 13 |
wall of intestine | 2.28e-19 | 13 |
gastrointestinal system mucosa | 2.28e-19 | 13 |
gastrointestinal system | 3.41e-16 | 47 |
organ component layer | 1.03e-14 | 24 |
small intestine | 2.62e-13 | 4 |
epithelium of mucosa | 8.29e-13 | 9 |
gastrointestinal system epithelium | 8.29e-13 | 9 |
intestinal epithelium | 8.29e-13 | 9 |
ileal mucosa | 1.04e-10 | 3 |
ileum | 1.04e-10 | 3 |
mucosa of small intestine | 1.04e-10 | 3 |
wall of small intestine | 1.04e-10 | 3 |
simple columnar epithelium | 2.33e-10 | 11 |
gut-associated lymphoid tissue | 1.68e-07 | 2 |
mucosa-associated lymphoid tissue | 1.68e-07 | 2 |
lymphoid tissue | 1.68e-07 | 2 |