FFCP PHASE1:Mm9::chr11:75229187..75229203,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=20317 | |EntrezGene=20317 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2712 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-490bp_to_ENSMUST00000139403_5end | |association_with_transcript=-490bp_to_ENSMUST00000139403_5end | ||
|cluster_id=chr11:75229187..75229203,- | |||
|description=CAGE_peak_3_at_Serpinf1_5end | |description=CAGE_peak_3_at_Serpinf1_5end | ||
|id=chr11:75229187..75229203,- | |id=chr11:75229187..75229203,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002453,3.08e-13,8;CL:0000333,2.35e-10,10;CL:0000095,2.35e-10,10;CL:0000243,2.35e-10,10;CL:0000123,2.35e-10,10;CL:0000125,2.35e-10,10;CL:0000030,2.35e-10,10;CL:0000339,2.35e-10,10;CL:0000128,1.95e-09,6;CL:0000126,1.95e-09,6;CL:0000127,1.95e-09,6;CL:0000219,3.24e-09,54;CL:0000182,3.37e-08,5;CL:0000151,1.26e-07,3;CL:0000499,1.26e-07,3;CL:0000327,1.26e-07,3;CL:0000192,3.09e-07,3;CL:0000359,3.09e-07,3;CL:0002539,3.09e-07,3;CL:0000514,3.09e-07,3;CL:0002321,4.17e-07,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.23e-09!22;UBERON:0007499!1.23e-09!22;UBERON:0006925!1.23e-09!22;UBERON:0009497!1.23e-09!22;UBERON:0000015!1.23e-09!22;UBERON:0002423!1.23e-09!22;UBERON:0006235!1.23e-09!22;UBERON:0008835!1.23e-09!22;UBERON:0003894!1.23e-09!22;UBERON:0004161!1.23e-09!22;UBERON:0008836!1.23e-09!22;UBERON:0002365!2.66e-09!25;UBERON:0002330!2.66e-09!25;UBERON:0005256!3.27e-09!47;UBERON:0009854!7.56e-09!23;UBERON:0009856!7.56e-09!23;UBERON:0003914!9.65e-09!47 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.83e-17,22;UBERON:0007499,2.83e-17,22;UBERON:0006925,2.83e-17,22;UBERON:0009497,2.83e-17,22;UBERON:0000015,2.83e-17,22;UBERON:0002423,2.83e-17,22;UBERON:0006235,2.83e-17,22;UBERON:0008835,2.83e-17,22;UBERON:0003894,2.83e-17,22;UBERON:0004161,2.83e-17,22;UBERON:0008836,2.83e-17,22;UBERON:0009854,2.26e-16,23;UBERON:0009856,2.26e-16,23;UBERON:0002365,8.73e-15,25;UBERON:0002330,8.73e-15,25;UBERON:0005256,1.85e-13,45;UBERON:0003914,1.10e-12,47;UBERON:0003104,7.31e-10,61;UBERON:0009142,7.31e-10,61;UBERON:0000490,7.19e-09,66;UBERON:0001135,3.09e-07,3;UBERON:0004237,3.09e-07,3;UBERON:0004695,3.09e-07,3;UBERON:0002111,3.09e-07,3;UBERON:0004178,3.09e-07,3;UBERON:0005172,7.10e-07,49;UBERON:0005173,7.10e-07,49;UBERON:0002417,7.10e-07,49;UBERON:0000916,7.10e-07,49;UBERON:0003929,8.11e-07,55 | |||
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.30201544258348,6.18399280439039,1.10128051297009,7.82391344348039,1.74420125104357,6.37089929929968,7.38833616482277,1.39986421625363,0,0,0,0,0.771778308107841,0.573066879877513,2.06268836910977,0,0,0.633831403506179,3.04960078862219,7.11435836888911,0.449949858640699,0,1.4209602298922,3.59520132622086,4.2264013585371,0.103689612308478,0.135005938331691,0,0.856952953211411,0,0,0,0,0,0.255374676170375,0.153606533256243,0,0,0,0.279182999001381,0,0,0,0.142371680799103,0,0.075726193333184,0.151143120213571,0,5.16254326188832,8.15965600449301,6.47643829965381,14.2950811838487,6.72040330646003,0.842666520790511,1.1930122580464,1.29893002301434,1.06001872353102,0.14084341977668,1.28326477414318,0,7.11066703153331,0,0,0,1.59857431606684,0,0,0,0.304465478312141,0,0,0.470354828542819,0.125666591329675,0,0,0,0.485300549842228,0.883366073841574,1.93950101254089,0,0,0,0,0.479260498023681,0.599902730993408,0.254140454146129,0,0,0,0,0,0,0,0.81471491080253,1.11966273549084,0.252722758433675,0,0.130120442962704,0.229902104433473,0.360124259610698,0.452114453507145,0.0680364991513279,0.12811372028485,0.187403449119458,0,0.431135985865684,0,0.351902248327898,0,0.556094498451196,0.696504333044333,0.411564272815887,0,0,0,0,0,0,0.36012412292203,0.23674473558521,0,0,0,0,0,0.16455984991348,0,0.162137619091711,0,0.439100230582101,0.268412837520744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0.203651327845314,0,0,0,0,0,0,1.77871576252289,0,0,0.674586337154561,0.405720242777006,0.72353147925725,0.25462585178142,1.72617682470486,3.08056930872567,1.92192989231657,17.2521847832825,4.83783231969054,0.312037673114561,2.02063102357689,1.07638448113147,5.78932225636041,0,0.757965647081939,0.162964976442026,0.169745085775188,0,0.167506257441816,0,0.195133647857799,0,0.221464689648775,0,0.163863314715738,0,0,0,0,0.491764273019036,0.275936746304732,0,0,0.983609672260053,1.00988370881749,0.315508219416257,0,0.430846795465598,0.955875191810208,0,0.849229592366497,1.21443210502468,1.16902343164525,0.790575555893047,0,0.283880170416537,0.178065603667255,0,0.659880491890142,0,0.242780636154981,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0.214337035031592,0.177340233642274,0.535106452806212,0.493647061806363,0.608929898229199,0,0,0,0.32977250588296,0.645857706783622,0.120625849856312,0,0,0,0,0,0,0,0,0,0,0.339956859987711,0,0,0,0,0.406638934253697,0.108005340821801,0,0.218362563746178,0,0.165306911450672,0.26175594198403,0.129614973291793,0,0,0,0.165458490457098,0,0,0.168956125490778,0.234714477291508,0,0.314578033277133,0,0,0,0,0.102710957164827,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.750729901804728,0,0.857473516316263,0,0,0,0.572895513439397,0,0,0,0,0,0.453142408984205,0,0.103787347584177,0.399024873401031,0,0,0.209613162627982,0.183843508450014,0.44449345560323,0.206035057238894,0.64183841918363,0.505394423527595,0.760437899670719,0,0.655490552289177,0.320125762024346,0.402048282689293,0,0.347652977834566,0.192909220463705,0.412085900803307,0.441596760403192,0.685738504770831,0.354951612318675,0.715308569841963,0.581385666529314,0.376437521661322,0.423073039458382,0.365855945745545,0.263069711437843,0.271608227691724,0,0.118635018124174,0.29551344712669,0,0.154936841185966,1.15743966588685,1.99848462350357,0.935726433781634,0.644613162144895,0.382576664137687,1.54413993383661,1.15933917810211 | |phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.30201544258348,6.18399280439039,1.10128051297009,7.82391344348039,1.74420125104357,6.37089929929968,7.38833616482277,1.39986421625363,0,0,0,0,0.771778308107841,0.573066879877513,2.06268836910977,0,0,0.633831403506179,3.04960078862219,7.11435836888911,0.449949858640699,0,1.4209602298922,3.59520132622086,4.2264013585371,0.103689612308478,0.135005938331691,0,0.856952953211411,0,0,0,0,0,0.255374676170375,0.153606533256243,0,0,0,0.279182999001381,0,0,0,0.142371680799103,0,0.075726193333184,0.151143120213571,0,5.16254326188832,8.15965600449301,6.47643829965381,14.2950811838487,6.72040330646003,0.842666520790511,1.1930122580464,1.29893002301434,1.06001872353102,0.14084341977668,1.28326477414318,0,7.11066703153331,0,0,0,1.59857431606684,0,0,0,0.304465478312141,0,0,0.470354828542819,0.125666591329675,0,0,0,0.485300549842228,0.883366073841574,1.93950101254089,0,0,0,0,0.479260498023681,0.599902730993408,0.254140454146129,0,0,0,0,0,0,0,0.81471491080253,1.11966273549084,0.252722758433675,0,0.130120442962704,0.229902104433473,0.360124259610698,0.452114453507145,0.0680364991513279,0.12811372028485,0.187403449119458,0,0.431135985865684,0,0.351902248327898,0,0.556094498451196,0.696504333044333,0.411564272815887,0,0,0,0,0,0,0.36012412292203,0.23674473558521,0,0,0,0,0,0.16455984991348,0,0.162137619091711,0,0.439100230582101,0.268412837520744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0.203651327845314,0,0,0,0,0,0,1.77871576252289,0,0,0.674586337154561,0.405720242777006,0.72353147925725,0.25462585178142,1.72617682470486,3.08056930872567,1.92192989231657,17.2521847832825,4.83783231969054,0.312037673114561,2.02063102357689,1.07638448113147,5.78932225636041,0,0.757965647081939,0.162964976442026,0.169745085775188,0,0.167506257441816,0,0.195133647857799,0,0.221464689648775,0,0.163863314715738,0,0,0,0,0.491764273019036,0.275936746304732,0,0,0.983609672260053,1.00988370881749,0.315508219416257,0,0.430846795465598,0.955875191810208,0,0.849229592366497,1.21443210502468,1.16902343164525,0.790575555893047,0,0.283880170416537,0.178065603667255,0,0.659880491890142,0,0.242780636154981,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0.214337035031592,0.177340233642274,0.535106452806212,0.493647061806363,0.608929898229199,0,0,0,0.32977250588296,0.645857706783622,0.120625849856312,0,0,0,0,0,0,0,0,0,0,0.339956859987711,0,0,0,0,0.406638934253697,0.108005340821801,0,0.218362563746178,0,0.165306911450672,0.26175594198403,0.129614973291793,0,0,0,0.165458490457098,0,0,0.168956125490778,0.234714477291508,0,0.314578033277133,0,0,0,0,0.102710957164827,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.750729901804728,0,0.857473516316263,0,0,0,0.572895513439397,0,0,0,0,0,0.453142408984205,0,0.103787347584177,0.399024873401031,0,0,0.209613162627982,0.183843508450014,0.44449345560323,0.206035057238894,0.64183841918363,0.505394423527595,0.760437899670719,0,0.655490552289177,0.320125762024346,0.402048282689293,0,0.347652977834566,0.192909220463705,0.412085900803307,0.441596760403192,0.685738504770831,0.354951612318675,0.715308569841963,0.581385666529314,0.376437521661322,0.423073039458382,0.365855945745545,0.263069711437843,0.271608227691724,0,0.118635018124174,0.29551344712669,0,0.154936841185966,1.15743966588685,1.99848462350357,0.935726433781634,0.644613162144895,0.382576664137687,1.54413993383661,1.15933917810211 | ||
|short_description=p3@Serpinf1 | |short_description=p3@Serpinf1 | ||
}} | }} |
Latest revision as of 16:07, 25 September 2015
Short description: | p3@Serpinf1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Serpinf1_5end |
Coexpression cluster: | MCL_coexpression_mm9:2712 |
Association with transcript: | -490bp_to_ENSMUST00000139403_5end |
EntrezGene: | Serpinf1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 3.08e-13 | 8 |
migratory neural crest cell | 2.35e-10 | 10 |
neuron associated cell | 2.35e-10 | 10 |
glial cell (sensu Vertebrata) | 2.35e-10 | 10 |
neuron associated cell (sensu Vertebrata) | 2.35e-10 | 10 |
glial cell | 2.35e-10 | 10 |
glioblast | 2.35e-10 | 10 |
glioblast (sensu Vertebrata) | 2.35e-10 | 10 |
oligodendrocyte | 1.95e-09 | 6 |
macroglial cell | 1.95e-09 | 6 |
astrocyte | 1.95e-09 | 6 |
motile cell | 3.24e-09 | 54 |
hepatocyte | 3.37e-08 | 5 |
secretory cell | 1.26e-07 | 3 |
stromal cell | 1.26e-07 | 3 |
extracellular matrix secreting cell | 1.26e-07 | 3 |
smooth muscle cell | 3.09e-07 | 3 |
vascular associated smooth muscle cell | 3.09e-07 | 3 |
aortic smooth muscle cell | 3.09e-07 | 3 |
smooth muscle myoblast | 3.09e-07 | 3 |
embryonic cell | 4.17e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
liver | 2.83e-17 | 22 |
epithelial sac | 2.83e-17 | 22 |
digestive gland | 2.83e-17 | 22 |
epithelium of foregut-midgut junction | 2.83e-17 | 22 |
anatomical boundary | 2.83e-17 | 22 |
hepatobiliary system | 2.83e-17 | 22 |
foregut-midgut junction | 2.83e-17 | 22 |
hepatic diverticulum | 2.83e-17 | 22 |
liver primordium | 2.83e-17 | 22 |
septum transversum | 2.83e-17 | 22 |
liver bud | 2.83e-17 | 22 |
digestive tract diverticulum | 2.26e-16 | 23 |
sac | 2.26e-16 | 23 |
exocrine gland | 8.73e-15 | 25 |
exocrine system | 8.73e-15 | 25 |
trunk mesenchyme | 1.85e-13 | 45 |
epithelial tube | 1.10e-12 | 47 |
mesenchyme | 7.31e-10 | 61 |
entire embryonic mesenchyme | 7.31e-10 | 61 |
unilaminar epithelium | 7.19e-09 | 66 |
smooth muscle tissue | 3.09e-07 | 3 |
blood vessel smooth muscle | 3.09e-07 | 3 |
arterial system smooth muscle | 3.09e-07 | 3 |
artery smooth muscle tissue | 3.09e-07 | 3 |
aorta smooth muscle tissue | 3.09e-07 | 3 |
abdomen element | 7.10e-07 | 49 |
abdominal segment element | 7.10e-07 | 49 |
abdominal segment of trunk | 7.10e-07 | 49 |
abdomen | 7.10e-07 | 49 |
gut epithelium | 8.11e-07 | 55 |