FFCP PHASE1:Mm9::chr3:67319585..67319622,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=109222 | |EntrezGene=109222 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=73 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BVL6 | |UniProt=Q8BVL6 | ||
|association_with_transcript=-140bp_to_ENSMUST00000054825,NM_001164763,uc008plo.2_5end | |||
|cluster_id=chr3:67319585..67319622,- | |||
|description=CAGE_peak_4_at_Rarres1_5end | |||
|id=chr3:67319585..67319622,- | |||
|ontology_enrichment_celltype=CL:0000181!4.67e-07!5;CL:0000417!4.67e-07!5;CL:0000668!4.67e-07!5;CL:0000412!4.67e-07!5;CL:0000182!4.67e-07!5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,8.20e-29,5;CL:0000057,5.62e-10,1;CL:0000632,5.62e-10,1;CL:0000223,1.78e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!9.64e-11!22;UBERON:0007499!9.64e-11!22;UBERON:0006925!9.64e-11!22;UBERON:0009497!9.64e-11!22;UBERON:0000015!9.64e-11!22;UBERON:0002423!9.64e-11!22;UBERON:0006235!9.64e-11!22;UBERON:0008835!9.64e-11!22;UBERON:0003894!9.64e-11!22;UBERON:0004161!9.64e-11!22;UBERON:0008836!9.64e-11!22;UBERON:0009854!3.88e-10!23;UBERON:0009856!3.88e-10!23;UBERON:0002365!4.47e-09!25;UBERON:0002330!4.47e-09!25;UBERON:0005256!1.27e-07!47 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,5.89e-25,22;UBERON:0007499,5.89e-25,22;UBERON:0006925,5.89e-25,22;UBERON:0009497,5.89e-25,22;UBERON:0000015,5.89e-25,22;UBERON:0002423,5.89e-25,22;UBERON:0006235,5.89e-25,22;UBERON:0008835,5.89e-25,22;UBERON:0003894,5.89e-25,22;UBERON:0004161,5.89e-25,22;UBERON:0008836,5.89e-25,22;UBERON:0009854,7.32e-24,23;UBERON:0009856,7.32e-24,23;UBERON:0002365,6.19e-22,25;UBERON:0002330,6.19e-22,25;UBERON:0005256,4.83e-12,45;UBERON:0003914,1.63e-11,47;UBERON:0005172,5.01e-11,49;UBERON:0005173,5.01e-11,49;UBERON:0002417,5.01e-11,49;UBERON:0000916,5.01e-11,49;UBERON:0003929,8.90e-10,55;UBERON:0002368,6.34e-09,60;UBERON:0003104,9.04e-09,61;UBERON:0009142,9.04e-09,61;UBERON:0002530,3.35e-08,65;UBERON:0000490,4.54e-08,66;UBERON:0009569,4.54e-08,66;UBERON:0005911,1.07e-07,69;UBERON:0000949,2.35e-07,72 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.811015449756117,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.7104801149461,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0.153606533256243,0,0.0914876436024097,0,0,0,0,0,0.284743361598206,0.186399445825301,0,0.226714680320357,0,3.44169550792555,5.439770669662,22.6675340487883,3.89865850468601,5.82434953226536,7.8648875273781,0,0,0,0,0,0,0,0,0,0,17.3559497172971,0,0.148442139064825,0,0,0,0,0.117588707135705,0,0.247194967734374,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130120442962704,0,0,0,0,0,0,0,0.215567992932842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0.502670417600539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77871576252289,0,0,0,0,0,0,0.287696137450811,0,1.09824565275233,0,0.744281895337007,0,0.757736633841335,1.4351793081753,0.964887042726734,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0.178368817602071,0.164549020602121,0,0,0,0,0.16488625294148,0.161464426695906,0.120625849856312,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0.165458490457098,0,0.129159823477731,0.337912250981556,0.117357238645754,0.13020438484395,0.524296722128554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0,0,0,0,0,0,0.187283014939765,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0.237270036248348,0,0,0.154936841185966,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.811015449756117,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.7104801149461,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0.153606533256243,0,0.0914876436024097,0,0,0,0,0,0.284743361598206,0.186399445825301,0,0.226714680320357,0,3.44169550792555,5.439770669662,22.6675340487883,3.89865850468601,5.82434953226536,7.8648875273781,0,0,0,0,0,0,0,0,0,0,17.3559497172971,0,0.148442139064825,0,0,0,0,0.117588707135705,0,0.247194967734374,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130120442962704,0,0,0,0,0,0,0,0.215567992932842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0.502670417600539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77871576252289,0,0,0,0,0,0,0.287696137450811,0,1.09824565275233,0,0.744281895337007,0,0.757736633841335,1.4351793081753,0.964887042726734,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0.178368817602071,0.164549020602121,0,0,0,0,0.16488625294148,0.161464426695906,0.120625849856312,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0.165458490457098,0,0.129159823477731,0.337912250981556,0.117357238645754,0.13020438484395,0.524296722128554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0,0,0,0,0,0,0.187283014939765,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0.237270036248348,0,0,0.154936841185966,0,0,0,0,0,0,0 | ||
|short_description=p4@Rarres1 | |||
}} | }} |
Latest revision as of 16:07, 25 September 2015
Short description: | p4@Rarres1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Rarres1_5end |
Coexpression cluster: | MCL_coexpression_mm9:73 |
Association with transcript: | -140bp_to_ENSMUST00000054825, NM_001164763, uc008plo.2_5end |
EntrezGene: | Rarres1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 8.20e-29 | 5 |
fibroblast | 5.62e-10 | 1 |
hepatic stellate cell | 5.62e-10 | 1 |
endodermal cell | 1.78e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
liver | 5.89e-25 | 22 |
epithelial sac | 5.89e-25 | 22 |
digestive gland | 5.89e-25 | 22 |
epithelium of foregut-midgut junction | 5.89e-25 | 22 |
anatomical boundary | 5.89e-25 | 22 |
hepatobiliary system | 5.89e-25 | 22 |
foregut-midgut junction | 5.89e-25 | 22 |
hepatic diverticulum | 5.89e-25 | 22 |
liver primordium | 5.89e-25 | 22 |
septum transversum | 5.89e-25 | 22 |
liver bud | 5.89e-25 | 22 |
digestive tract diverticulum | 7.32e-24 | 23 |
sac | 7.32e-24 | 23 |
exocrine gland | 6.19e-22 | 25 |
exocrine system | 6.19e-22 | 25 |
trunk mesenchyme | 4.83e-12 | 45 |
epithelial tube | 1.63e-11 | 47 |
abdomen element | 5.01e-11 | 49 |
abdominal segment element | 5.01e-11 | 49 |
abdominal segment of trunk | 5.01e-11 | 49 |
abdomen | 5.01e-11 | 49 |
gut epithelium | 8.90e-10 | 55 |
endocrine gland | 6.34e-09 | 60 |
mesenchyme | 9.04e-09 | 61 |
entire embryonic mesenchyme | 9.04e-09 | 61 |
gland | 3.35e-08 | 65 |
unilaminar epithelium | 4.54e-08 | 66 |
subdivision of trunk | 4.54e-08 | 66 |
endo-epithelium | 1.07e-07 | 69 |
endocrine system | 2.35e-07 | 72 |