FFCP PHASE1:Mm9::chr10:120335966..120336010,-: Difference between revisions
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{{FFCP|EntrezGene=320183|HGNC=|UniProt=Q8BU85|association_with_transcript=16bp_to_NM_177092,uc007hfh.2_5end|description=CAGE_peak_1_at_Msrb3_5end|id=chr10:120335966..120336010,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004535!1.01e-14!23;UBERON:0001009!1.01e-14!23;UBERON:0004872!2.95e-12!33;UBERON:0007100!1.74e-11!18;UBERON:0000948!1.74e-11!18;UBERON:0005498!1.74e-11!18;UBERON:0004140!1.74e-11!18;UBERON:0009881!1.74e-11!18;UBERON:0004141!1.74e-11!18;UBERON:0003084!1.74e-11!18;UBERON:0007005!1.74e-11!18;UBERON:0004139!1.74e-11!18;UBERON:0004291!1.74e-11!18;UBERON:0000926!6.80e-08!193;UBERON:0004120!6.80e-08!193;UBERON:0006603!6.80e-08!193;UBERON:0003914!2.32e-07!47|ontology_enrichment_uberon_v019_2=UBERON:0004535,7.35e-15,23;UBERON:0001009,7.35e-15,23;UBERON:0004872,2.28e-12,33;UBERON:0007100,1.37e-11,18;UBERON:0000948,1.37e-11,18;UBERON:0005498,1.37e-11,18;UBERON:0004140,1.37e-11,18;UBERON:0009881,1.37e-11,18;UBERON:0004141,1.37e-11,18;UBERON:0003084,1.37e-11,18;UBERON:0007005,1.37e-11,18;UBERON:0004139,1.37e-11,18;UBERON:0004291,1.37e-11,18;UBERON:0003914,2.91e-07,47|phase1_expression=16.6554800988986,0,0,0,0,0,0,0,0,0.234064526321993,0,0.0797721589953364,0,0,0.666219523631325,0.607425802169478,0,0.157731082679119,0.411343300817216,0,7.48380953329414,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,69.2432498865675,69.0376901604894,56.1653061614746,6.25913075478431,1.96222640742402,8.34807494390993,4.47188767870852,4.4795654920116,5.75010257459886,0.167782606057736,0,0,45.0204013062907,37.8224140719159,60.8493068887382,0.202316460859598,0,0,8.80995783379743,1.77858959222228,2.6996991518442,1.97773272513395,4.2628806896766,4.49400165777607,1.53687322128622,0.518448061542388,0.135005938331691,1.26194976810829,1.14260393761521,0,0.489963196859816,0.383381884072945,0,0,1.40456071893706,0.921639199537461,0.263772575460388,0.182975287204819,0,0.558365998002762,0.56276261003168,0.916789486660861,0.589257170947335,0.854230084794618,0.559198337475902,1.66597625333005,1.20914496170857,52.7553369437054,19.7897491705719,0,0.539703191637817,1.94932925234301,1.79210754838934,11.5164424508037,78.9092393536407,54.5550609666024,57.2410110706751,6.4787973097273,93.678328512452,76.4415719119937,42.6640021891999,0.649473123033642,1.52015919285059,0.505524445014783,5.36664234679582,8.80388804400384,21.8209944425292,2.4287945747259,4.26251669636998,7.14908041493781,6.17962826265753,11.6412820064348,14.9543243682314,5.6854842578906,45.4041980728523,7.07688441559899,23.1326595424795,18.3298460322127,14.5462575940567,13.0474232852686,1.46390398505774,1.04723353406728,4.85368404896324,3.71426885968353,0,1.27070227073065,1.19832511523858,0.457500602818626,0.125654352112864,3.12883776346098,1.53429274398198,0.83115217823824,1.62241263067758,22.9138568663212,18.4122316502938,12.1306924048164,6.52369753248069,5.85541993332167,6.43725892413724,5.94205028357652,6.93242162044289,7.34794190834341,8.83984669965463,7.77724313845749,7.24369438069244,3.23351989399263,8.69887968771969,9.32540958068929,5.47989331068937,5.83899223373756,9.05455632957633,6.99659263787008,5.37392520409932,0,0,0.568326998791185,21.1268287986212,21.3418714582798,27.0093092191522,30.7768156260773,35.8110901780275,44.4289285115649,51.1574678450897,53.6546802799238,66.9065411763881,66.1530596652191,55.4886028587342,54.8025152529985,54.3863953222236,54.6679787074716,41.0671641406738,0.630869845692382,0.92614151141356,0,4.23120906661671,11.3042772783674,13.7019636397659,13.4022159774977,15.7313149206207,14.0098167622268,14.0766963323294,8.0669940462567,16.9639923365731,20.6094871216221,17.9060824837036,16.9618755793635,8.98819408654222,11.2391785934841,6.96994456390285,3.41402221715547,7.08340778180319,5.63538678365402,11.4044743593376,7.37019451236978,11.6425461017929,15.7458977439401,7.0852871030209,7.06494275286187,6.29325536001183,4.15033677922008,1.83529616287703,1.96558995113203,1.57403478669398,1.42002084971952,0.964708639009667,1.78238096246994,2.01387296215567,3.56697498905078,4.3929826110093,18.6898668485561,7.07067800570156,6.55279113540577,7.57736633841335,5.20252499213545,7.23665282045051,30.6690295676564,12.3169417650815,13.6890580211302,8.31750920298422,11.7345124144251,10.3853879613926,12.1402256851867,14.0496226457615,27.9014205067958,25.4684393096091,33.0071371120998,29.8231232782643,29.3564469172022,26.6154267789981,0,0,8.35999264132362,16.5562047782839,2.56880943980467,1.75817529888305,42.6230857979356,37.6181681534516,5.04813151066011,4.68526493155966,2.15423397732799,0.955875191810208,1.11399337041197,0.566153061577665,5.26253912177363,4.9683495844923,2.37172666767914,0.642642632843614,20.7232524404072,8.54714897602825,18.0804524882469,46.1916344323099,5.30980553359851,1.94224508923985,1.209294227859,2.82907619633847,0.885905678642318,10.4527950300935,8.26970538138308,6.18007340111759,6.06045543254026,14.85372762298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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=320183 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=Q8BU85 | |||
|association_with_transcript=16bp_to_NM_177092,uc007hfh.2_5end | |||
|cluster_id=chr10:120335966..120336010,- | |||
|description=CAGE_peak_1_at_Msrb3_5end | |||
|id=chr10:120335966..120336010,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!1.01e-14!23;UBERON:0001009!1.01e-14!23;UBERON:0004872!2.95e-12!33;UBERON:0007100!1.74e-11!18;UBERON:0000948!1.74e-11!18;UBERON:0005498!1.74e-11!18;UBERON:0004140!1.74e-11!18;UBERON:0009881!1.74e-11!18;UBERON:0004141!1.74e-11!18;UBERON:0003084!1.74e-11!18;UBERON:0007005!1.74e-11!18;UBERON:0004139!1.74e-11!18;UBERON:0004291!1.74e-11!18;UBERON:0000926!6.80e-08!193;UBERON:0004120!6.80e-08!193;UBERON:0006603!6.80e-08!193;UBERON:0003914!2.32e-07!47 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004535,7.35e-15,23;UBERON:0001009,7.35e-15,23;UBERON:0004872,2.28e-12,33;UBERON:0007100,1.37e-11,18;UBERON:0000948,1.37e-11,18;UBERON:0005498,1.37e-11,18;UBERON:0004140,1.37e-11,18;UBERON:0009881,1.37e-11,18;UBERON:0004141,1.37e-11,18;UBERON:0003084,1.37e-11,18;UBERON:0007005,1.37e-11,18;UBERON:0004139,1.37e-11,18;UBERON:0004291,1.37e-11,18;UBERON:0003914,2.91e-07,47 | |||
|phase1_expression=16.6554800988986,0,0,0,0,0,0,0,0,0.234064526321993,0,0.0797721589953364,0,0,0.666219523631325,0.607425802169478,0,0.157731082679119,0.411343300817216,0,7.48380953329414,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,69.2432498865675,69.0376901604894,56.1653061614746,6.25913075478431,1.96222640742402,8.34807494390993,4.47188767870852,4.4795654920116,5.75010257459886,0.167782606057736,0,0,45.0204013062907,37.8224140719159,60.8493068887382,0.202316460859598,0,0,8.80995783379743,1.77858959222228,2.6996991518442,1.97773272513395,4.2628806896766,4.49400165777607,1.53687322128622,0.518448061542388,0.135005938331691,1.26194976810829,1.14260393761521,0,0.489963196859816,0.383381884072945,0,0,1.40456071893706,0.921639199537461,0.263772575460388,0.182975287204819,0,0.558365998002762,0.56276261003168,0.916789486660861,0.589257170947335,0.854230084794618,0.559198337475902,1.66597625333005,1.20914496170857,52.7553369437054,19.7897491705719,0,0.539703191637817,1.94932925234301,1.79210754838934,11.5164424508037,78.9092393536407,54.5550609666024,57.2410110706751,6.4787973097273,93.678328512452,76.4415719119937,42.6640021891999,0.649473123033642,1.52015919285059,0.505524445014783,5.36664234679582,8.80388804400384,21.8209944425292,2.4287945747259,4.26251669636998,7.14908041493781,6.17962826265753,11.6412820064348,14.9543243682314,5.6854842578906,45.4041980728523,7.07688441559899,23.1326595424795,18.3298460322127,14.5462575940567,13.0474232852686,1.46390398505774,1.04723353406728,4.85368404896324,3.71426885968353,0,1.27070227073065,1.19832511523858,0.457500602818626,0.125654352112864,3.12883776346098,1.53429274398198,0.83115217823824,1.62241263067758,22.9138568663212,18.4122316502938,12.1306924048164,6.52369753248069,5.85541993332167,6.43725892413724,5.94205028357652,6.93242162044289,7.34794190834341,8.83984669965463,7.77724313845749,7.24369438069244,3.23351989399263,8.69887968771969,9.32540958068929,5.47989331068937,5.83899223373756,9.05455632957633,6.99659263787008,5.37392520409932,0,0,0.568326998791185,21.1268287986212,21.3418714582798,27.0093092191522,30.7768156260773,35.8110901780275,44.4289285115649,51.1574678450897,53.6546802799238,66.9065411763881,66.1530596652191,55.4886028587342,54.8025152529985,54.3863953222236,54.6679787074716,41.0671641406738,0.630869845692382,0.92614151141356,0,4.23120906661671,11.3042772783674,13.7019636397659,13.4022159774977,15.7313149206207,14.0098167622268,14.0766963323294,8.0669940462567,16.9639923365731,20.6094871216221,17.9060824837036,16.9618755793635,8.98819408654222,11.2391785934841,6.96994456390285,3.41402221715547,7.08340778180319,5.63538678365402,11.4044743593376,7.37019451236978,11.6425461017929,15.7458977439401,7.0852871030209,7.06494275286187,6.29325536001183,4.15033677922008,1.83529616287703,1.96558995113203,1.57403478669398,1.42002084971952,0.964708639009667,1.78238096246994,2.01387296215567,3.56697498905078,4.3929826110093,18.6898668485561,7.07067800570156,6.55279113540577,7.57736633841335,5.20252499213545,7.23665282045051,30.6690295676564,12.3169417650815,13.6890580211302,8.31750920298422,11.7345124144251,10.3853879613926,12.1402256851867,14.0496226457615,27.9014205067958,25.4684393096091,33.0071371120998,29.8231232782643,29.3564469172022,26.6154267789981,0,0,8.35999264132362,16.5562047782839,2.56880943980467,1.75817529888305,42.6230857979356,37.6181681534516,5.04813151066011,4.68526493155966,2.15423397732799,0.955875191810208,1.11399337041197,0.566153061577665,5.26253912177363,4.9683495844923,2.37172666767914,0.642642632843614,20.7232524404072,8.54714897602825,18.0804524882469,46.1916344323099,5.30980553359851,1.94224508923985,1.209294227859,2.82907619633847,0.885905678642318,10.4527950300935,8.26970538138308,6.18007340111759,6.06045543254026,14.8537276229834,4.21674434299995,0,2.38307724027652,5.221771726908,2.58717367565509,4.71541477069503,4.96552654198366,3.74574516964348,4.93647061806363,3.04464949114599,6.10146440965647,13.1335883935569,16.7601582521771,13.3557864882599,9.68786560175433,12.9069659346254,15.2796600324015,17.0706535734864,9.61886760878507,3.70850604021019,1.70870880797853,8.2554747185289,7.22258656741876,4.1441060541032,2.59719032669948,3.43167259809784,8.49892149969276,6.85762116385924,8.153798454461,17.184071124272,10.4390877881775,22.5684608510802,21.9250841868257,21.5360944894903,23.364794320841,37.627152641365,44.3849057245054,31.1489570960995,14.6464919819726,14.2908042009993,8.45539408026285,5.08356256549528,3.97100377097034,7.19469396872976,6.71631082084202,7.7719817725758,9.85800804624333,15.4943217964301,12.7928400199367,11.1128695579963,8.64090018773596,2.52808896502543,3.24360344464263,3.90301637226344,2.33857481360031,2.32734704367726,1.98681354781265,1.56254084375959,1.03382669022204,1.81739609906666,1.21930890648,1.31074040677893,0.487289403698762,1.34696578296461,0.935015217452552,13.3770926332975,2.66383144048878,1.16628013592318,3.18980771091749,79.0145439591659,33.9705280566639,30.5863212526333,13.719576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| |||
|short_description=p1@Msrb3 | |||
}} |
Latest revision as of 16:23, 25 September 2015
Short description: | p1@Msrb3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Msrb3_5end |
Coexpression cluster: | NA |
Association with transcript: | 16bp_to_NM_177092, uc007hfh.2_5end |
EntrezGene: | Msrb3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiovascular system | 7.35e-15 | 23 |
circulatory system | 7.35e-15 | 23 |
splanchnic layer of lateral plate mesoderm | 2.28e-12 | 33 |
primary circulatory organ | 1.37e-11 | 18 |
heart | 1.37e-11 | 18 |
primitive heart tube | 1.37e-11 | 18 |
primary heart field | 1.37e-11 | 18 |
anterior lateral plate mesoderm | 1.37e-11 | 18 |
heart tube | 1.37e-11 | 18 |
heart primordium | 1.37e-11 | 18 |
cardiac mesoderm | 1.37e-11 | 18 |
cardiogenic plate | 1.37e-11 | 18 |
heart rudiment | 1.37e-11 | 18 |
epithelial tube | 2.91e-07 | 47 |