FFCP PHASE1:Mm9::chr10:121484349..121484378,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr10:121484349..121484378,- to FFCP PHASE1:Mm9::chr10:121484349..121484378,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=117600 | |EntrezGene=117600 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q91Z69,D3YZW1 | |UniProt=Q91Z69,D3YZW1 | ||
|association_with_transcript=0bp_to_ENSMUST00000020322,ENSMUST00000162710,NM_001081037,NM_001242411_5end | |||
|cluster_id=chr10:121484349..121484378,- | |||
|description=CAGE_peak_2_at_Srgap1_5end | |||
|id=chr10:121484349..121484378,- | |||
|ontology_enrichment_celltype=CL:0000117!1.41e-09!23;CL:0000337!1.41e-09!23;CL:0000540!7.11e-08!33;CL:0000047!7.11e-08!33;CL:0000031!7.11e-08!33;CL:0000404!7.11e-08!33;CL:0000393!8.82e-07!39;CL:0000211!8.82e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.24e-10,23;CL:0000337,1.24e-10,23;CL:0000540,9.03e-08,33;CL:0000047,9.03e-08,33;CL:0000031,9.03e-08,33;CL:0000404,9.03e-08,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!1.47e-08!333;UBERON:0000922!1.06e-07!328;UBERON:0004121!1.11e-07!102;UBERON:0000924!1.11e-07!102;UBERON:0006601!1.11e-07!102;UBERON:0000073!4.77e-07!75;UBERON:0001016!4.77e-07!75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.86e-07,95;UBERON:0000924,1.86e-07,95;UBERON:0006601,1.86e-07,95;UBERON:0002420,6.34e-07,8;UBERON:0007245,6.34e-07,8;UBERON:0010009,6.34e-07,8;UBERON:0010011,6.34e-07,8;UBERON:0000454,6.34e-07,8 | |||
|phase1_expression=2.24208385946712,1.04692622291808,2.72999543633722,0,0,1.84667199103079,1.86890112476421,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0.639969691173627,0.22940928106717,0.57423196411502,0.86152399231815,1.29282739611533,0.950117097281869,1.00812051903972,0.665191531965914,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,1.00717454380462,0.608261587317087,2.20256102594018,0,0.436050312760893,0.439372365468944,0.388859798148567,1.39986421625363,1.43752564364972,0,0,0,1.02903774414379,1.14613375975503,0,2.22548106945558,3.1739458756322,4.43681982454325,3.38844532069132,0,0,0,0,0,0.768436610643109,2.38486108309499,2.70011876663381,1.47227472945967,1.99955689082663,1.32521124570968,3.91970557487853,2.87536413054709,1.83843757322004,3.30347642998166,3.31987079021488,3.5329502648936,4.61602007055678,4.66586982372289,2.6045668527838,3.35019598801657,5.06486349028512,5.19514042441154,1.76777151284201,2.13557521198654,2.42319279572891,5.07365495332333,3.02286240427142,1.44932244350839,0,0,0,0,0.448026887097336,0.421333260395256,0.170430322578058,0,0,4.3661460130771,0,0,0,0,0.253359865475099,0,0.45673551887624,0.517875767294343,0,0.867426633830679,1.82679286987285,0.691846491768175,0.753613202763113,0.940709657085638,0.125666591329675,1.73036477414062,0.433798070759735,0,2.26473589926373,1.98757366614354,1.45462575940567,5.59175283654366,1.46390398505774,3.35114730901528,1.27728527604296,0,0,0,2.54644086988199,10.5225138648284,8.41884159156192,1.21677024134594,0,4.57133698031032,1.94689515681309,0.916554274652847,0.995255764880744,0.252722758433675,0.210441855886474,1.17108398666433,1.14951052216736,1.26043490863744,2.71268672104287,1.42876648217788,1.40925092313335,0.843315521037559,0.258703370739016,0.431135985865684,1.13463648100692,1.05570674498369,1.7535658594206,2.78047249225598,3.83077383174383,2.46938563689532,1.79130840136644,0,0,0,1.44988040774851,0.938104239924385,0.540186184383045,1.65721314909647,1.57411385397923,1.69693824176116,1.39520366850245,0.536546802799238,0.817357396570186,0.987359099480883,1.47750717671186,1.29710095273369,0.438599962275997,0.658650345873152,0.671032093801859,1.68231958851302,3.39585220851639,1.32167513193519,0.264450566663544,1.06644125267617,2.32236671860439,2.19074684247559,2.01683524623343,2.89091456998331,0.570676878337677,0,1.64698954724011,0.502670417600539,1.39269530428806,0.974820435595601,0.898819408654221,1.51296634912286,1.99141273254367,0.758671603812327,2.17072173958485,4.50830942692322,0.814605311381257,2.52138233317913,3.64706263429657,2.02356918797623,2.06654207171443,0.627994911365499,0.863780147452604,0.296452627087149,0.333690211432188,0.982794975566015,0,0.405720242777006,1.20588579876208,0.50925170356284,0.287696137450811,0,0.549122826376163,1.43768206527355,1.48856379067401,0.312037673114561,0.505157755894224,0.358794827043824,0,1.84753190166605,1.13694847062291,1.62964976442026,1.52770577197669,1.40814148973101,1.00503754465089,0.952174563544055,1.95133647857799,4.25614889086716,4.4292937929755,5.10255259703959,1.80249646187312,2.07221978239075,1.59113964439663,0,0,0.983528546038072,0.551873492609465,3.69266356971921,2.81308047821288,0.163934945376675,0.504941854408746,0.631016438832513,0.780877488593277,0.646270193198397,0.238968797952552,2.22798674082394,2.26461224631066,1.61924280669958,1.16902343164525,0.395287777946524,1.28528526568723,1.27746076687442,2.13678724400706,1.14020871547503,1.64970122972535,1.32745138339963,1.69946445308487,1.81394134178851,0.754420319023592,0.295301892880773,0.307435147943927,1.03371317267288,0.363533729477506,1.42598951353889,0.316036757935816,0,0,0.680879211507576,2.16073312837572,0.776152102696527,0.214337035031592,1.24138163549592,1.07021290561242,2.30368628842969,0.913394847343798,1.17335854031855,3.38931313382112,0,2.96795255294664,2.9063596805263,3.92034012033013,2.26807453605959,2.62625439592098,0.874442509889552,3.33765543618917,0.170870880797853,1.03193433981611,2.03713980106683,0.376736914009382,0.136694227721025,0.228778173206523,0.169978429993855,0.279902904647316,0.138199973804424,2.86401185404534,0.316335993581135,4.06638934253697,3.56417624711944,4.18176592028937,2.40198820120795,3.50647300600534,3.38879168473877,3.14107130380836,1.55537967950151,4.97071450469541,0,2.24274819065968,0.992750942742586,0.583353565032143,0,0.506868376472335,0.117357238645754,0.13020438484395,0.104859344425711,0,0.288030006257865,0,0.810900861160657,0.308132871494482,0.25984164595559,0.179026695667481,0,0.240390899039938,0.147689527174577,0.201932899896295,0.0762068066549998,0.100826185136841,0,0,0.584384510907845,0,0,0.269141569828427,0.167884616364078,2.70465431645067,0.93841237725591,2.74727436400898,1.07184189539533,0,0.564751842617067,0.920650473014354,1.71868654031819,0.171853182343688,0,0,0.675022500231806,0,0.453142408984205,0.51776031175182,1.03787347584177,1.59609949360412,2.04880326904961,3.16038732188782,2.30574478890781,2.5738091183002,1.77797382241292,1.44224540067226,2.24643446714271,2.0215776941103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| |phase1_expression=2.24208385946712,1.04692622291808,2.72999543633722,0,0,1.84667199103079,1.86890112476421,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0.639969691173627,0.22940928106717,0.57423196411502,0.86152399231815,1.29282739611533,0.950117097281869,1.00812051903972,0.665191531965914,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,1.00717454380462,0.608261587317087,2.20256102594018,0,0.436050312760893,0.439372365468944,0.388859798148567,1.39986421625363,1.43752564364972,0,0,0,1.02903774414379,1.14613375975503,0,2.22548106945558,3.1739458756322,4.43681982454325,3.38844532069132,0,0,0,0,0,0.768436610643109,2.38486108309499,2.70011876663381,1.47227472945967,1.99955689082663,1.32521124570968,3.91970557487853,2.87536413054709,1.83843757322004,3.30347642998166,3.31987079021488,3.5329502648936,4.61602007055678,4.66586982372289,2.6045668527838,3.35019598801657,5.06486349028512,5.19514042441154,1.76777151284201,2.13557521198654,2.42319279572891,5.07365495332333,3.02286240427142,1.44932244350839,0,0,0,0,0.448026887097336,0.421333260395256,0.170430322578058,0,0,4.3661460130771,0,0,0,0,0.253359865475099,0,0.45673551887624,0.517875767294343,0,0.867426633830679,1.82679286987285,0.691846491768175,0.753613202763113,0.940709657085638,0.125666591329675,1.73036477414062,0.433798070759735,0,2.26473589926373,1.98757366614354,1.45462575940567,5.59175283654366,1.46390398505774,3.35114730901528,1.27728527604296,0,0,0,2.54644086988199,10.5225138648284,8.41884159156192,1.21677024134594,0,4.57133698031032,1.94689515681309,0.916554274652847,0.995255764880744,0.252722758433675,0.210441855886474,1.17108398666433,1.14951052216736,1.26043490863744,2.71268672104287,1.42876648217788,1.40925092313335,0.843315521037559,0.258703370739016,0.431135985865684,1.13463648100692,1.05570674498369,1.7535658594206,2.78047249225598,3.83077383174383,2.46938563689532,1.79130840136644,0,0,0,1.44988040774851,0.938104239924385,0.540186184383045,1.65721314909647,1.57411385397923,1.69693824176116,1.39520366850245,0.536546802799238,0.817357396570186,0.987359099480883,1.47750717671186,1.29710095273369,0.438599962275997,0.658650345873152,0.671032093801859,1.68231958851302,3.39585220851639,1.32167513193519,0.264450566663544,1.06644125267617,2.32236671860439,2.19074684247559,2.01683524623343,2.89091456998331,0.570676878337677,0,1.64698954724011,0.502670417600539,1.39269530428806,0.974820435595601,0.898819408654221,1.51296634912286,1.99141273254367,0.758671603812327,2.17072173958485,4.50830942692322,0.814605311381257,2.52138233317913,3.64706263429657,2.02356918797623,2.06654207171443,0.627994911365499,0.863780147452604,0.296452627087149,0.333690211432188,0.982794975566015,0,0.405720242777006,1.20588579876208,0.50925170356284,0.287696137450811,0,0.549122826376163,1.43768206527355,1.48856379067401,0.312037673114561,0.505157755894224,0.358794827043824,0,1.84753190166605,1.13694847062291,1.62964976442026,1.52770577197669,1.40814148973101,1.00503754465089,0.952174563544055,1.95133647857799,4.25614889086716,4.4292937929755,5.10255259703959,1.80249646187312,2.07221978239075,1.59113964439663,0,0,0.983528546038072,0.551873492609465,3.69266356971921,2.81308047821288,0.163934945376675,0.504941854408746,0.631016438832513,0.780877488593277,0.646270193198397,0.238968797952552,2.22798674082394,2.26461224631066,1.61924280669958,1.16902343164525,0.395287777946524,1.28528526568723,1.27746076687442,2.13678724400706,1.14020871547503,1.64970122972535,1.32745138339963,1.69946445308487,1.81394134178851,0.754420319023592,0.295301892880773,0.307435147943927,1.03371317267288,0.363533729477506,1.42598951353889,0.316036757935816,0,0,0.680879211507576,2.16073312837572,0.776152102696527,0.214337035031592,1.24138163549592,1.07021290561242,2.30368628842969,0.913394847343798,1.17335854031855,3.38931313382112,0,2.96795255294664,2.9063596805263,3.92034012033013,2.26807453605959,2.62625439592098,0.874442509889552,3.33765543618917,0.170870880797853,1.03193433981611,2.03713980106683,0.376736914009382,0.136694227721025,0.228778173206523,0.169978429993855,0.279902904647316,0.138199973804424,2.86401185404534,0.316335993581135,4.06638934253697,3.56417624711944,4.18176592028937,2.40198820120795,3.50647300600534,3.38879168473877,3.14107130380836,1.55537967950151,4.97071450469541,0,2.24274819065968,0.992750942742586,0.583353565032143,0,0.506868376472335,0.117357238645754,0.13020438484395,0.104859344425711,0,0.288030006257865,0,0.810900861160657,0.308132871494482,0.25984164595559,0.179026695667481,0,0.240390899039938,0.147689527174577,0.201932899896295,0.0762068066549998,0.100826185136841,0,0,0.584384510907845,0,0,0.269141569828427,0.167884616364078,2.70465431645067,0.93841237725591,2.74727436400898,1.07184189539533,0,0.564751842617067,0.920650473014354,1.71868654031819,0.171853182343688,0,0,0.675022500231806,0,0.453142408984205,0.51776031175182,1.03787347584177,1.59609949360412,2.04880326904961,3.16038732188782,2.30574478890781,2.5738091183002,1.77797382241292,1.44224540067226,2.24643446714271,2.0215776941103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| ||
|short_description=p2@Srgap1 | |||
}} | }} |
Latest revision as of 16:40, 25 September 2015
Short description: | p2@Srgap1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Srgap1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000020322, ENSMUST00000162710, NM_001081037, NM_001242411_5end |
EntrezGene: | Srgap1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.24e-10 | 23 |
neuroblast (sensu Vertebrata) | 1.24e-10 | 23 |
neuron | 9.03e-08 | 33 |
neuronal stem cell | 9.03e-08 | 33 |
neuroblast | 9.03e-08 | 33 |
electrically signaling cell | 9.03e-08 | 33 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 1.86e-07 | 95 |
ectoderm | 1.86e-07 | 95 |
presumptive ectoderm | 1.86e-07 | 95 |
basal ganglion | 6.34e-07 | 8 |
nuclear complex of neuraxis | 6.34e-07 | 8 |
aggregate regional part of brain | 6.34e-07 | 8 |
collection of basal ganglia | 6.34e-07 | 8 |
cerebral subcortex | 6.34e-07 | 8 |