FFCP PHASE1:Mm9::chr16:76022511..76022532,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=67742 | |EntrezGene=67742 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=57 | |||
|TSSclassifier=NA | |||
|UniProt=D3Z0Y1 | |UniProt=D3Z0Y1 | ||
|association_with_transcript=0bp_to_ENSMUST00000114240_5end | |association_with_transcript=0bp_to_ENSMUST00000114240_5end | ||
|cluster_id=chr16:76022511..76022532,- | |||
|description=CAGE_peak_4_at_Samsn1_5end | |description=CAGE_peak_4_at_Samsn1_5end | ||
|id=chr16:76022511..76022532,- | |id=chr16:76022511..76022532,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000970!6.21e-26!9;UBERON:0000019!6.21e-26!9;UBERON:0000047!6.21e-26!9;UBERON:0004088!6.21e-26!9;UBERON:0002104!6.21e-26!9;UBERON:0001456!6.21e-26!9;UBERON:0003072!6.21e-26!9;UBERON:0003071!6.21e-26!9;UBERON:0004128!6.21e-26!9;UBERON:0001444!5.38e-21!11;UBERON:0000020!3.84e-19!12;UBERON:0001032!3.84e-19!12;UBERON:0004456!3.84e-19!12;UBERON:0005085!1.42e-17!13;UBERON:0000007!1.56e-15!8;UBERON:0003296!1.56e-15!8;UBERON:0010133!1.56e-15!8;UBERON:0001894!2.58e-12!10;UBERON:0006222!2.58e-12!10;UBERON:0003056!4.86e-12!49;UBERON:0000033!9.58e-09!63;UBERON:0002346!1.14e-08!71;UBERON:0003075!1.14e-08!71;UBERON:0007284!1.14e-08!71 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,2.75e-62,9;UBERON:0000019,2.75e-62,9;UBERON:0000047,2.75e-62,9;UBERON:0010312,2.75e-62,9;UBERON:0004088,2.75e-62,9;UBERON:0002104,2.75e-62,9;UBERON:0001456,2.75e-62,9;UBERON:0003072,2.75e-62,9;UBERON:0004128,2.75e-62,9;UBERON:0003071,2.75e-62,9;UBERON:0001444,5.89e-51,11;UBERON:0000020,1.05e-46,12;UBERON:0001032,1.05e-46,12;UBERON:0004456,1.05e-46,12;UBERON:0000033,4.18e-43,13;UBERON:0005085,4.18e-43,13;UBERON:0003056,1.81e-17,49;UBERON:0007811,2.04e-15,36;UBERON:0002346,2.86e-13,64;UBERON:0003075,2.86e-13,64;UBERON:0007284,2.86e-13,64;UBERON:0000153,7.53e-13,43;UBERON:0010371,1.42e-11,73;UBERON:0010314,4.56e-09,92;UBERON:0004121,9.21e-09,95;UBERON:0000924,9.21e-09,95;UBERON:0006601,9.21e-09,95 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.186399445825301,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.41927897361595,0,2.5289231487682,7.92273371143537,6.17889753126432,4.49040894398764,5.50888997224854,5.528401749024,17.5918292102531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.720244376125241,0,1.07168517515796,1.41872186913819,0.356737635204141,0.329098041204242,0.304464949114599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0.147198920134397,0,0,0,0,0.0941093804153306,0.169229215783353,0,0,0,0,0.237270036248348,0.197008964751127,0,0.154936841185966,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.186399445825301,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.41927897361595,0,2.5289231487682,7.92273371143537,6.17889753126432,4.49040894398764,5.50888997224854,5.528401749024,17.5918292102531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.720244376125241,0,1.07168517515796,1.41872186913819,0.356737635204141,0.329098041204242,0.304464949114599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0.147198920134397,0,0,0,0,0.0941093804153306,0.169229215783353,0,0,0,0,0.237270036248348,0.197008964751127,0,0.154936841185966,0,0,0,0,0,0,0 | ||
|short_description=p4@Samsn1 | |short_description=p4@Samsn1 | ||
}} | }} |
Latest revision as of 18:16, 25 September 2015
Short description: | p4@Samsn1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Samsn1_5end |
Coexpression cluster: | MCL_coexpression_mm9:57 |
Association with transcript: | 0bp_to_ENSMUST00000114240_5end |
EntrezGene: | Samsn1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eye | 2.75e-62 | 9 |
camera-type eye | 2.75e-62 | 9 |
simple eye | 2.75e-62 | 9 |
immature eye | 2.75e-62 | 9 |
ocular region | 2.75e-62 | 9 |
visual system | 2.75e-62 | 9 |
face | 2.75e-62 | 9 |
optic cup | 2.75e-62 | 9 |
optic vesicle | 2.75e-62 | 9 |
eye primordium | 2.75e-62 | 9 |
subdivision of head | 5.89e-51 | 11 |
sense organ | 1.05e-46 | 12 |
sensory system | 1.05e-46 | 12 |
entire sense organ system | 1.05e-46 | 12 |
head | 4.18e-43 | 13 |
ectodermal placode | 4.18e-43 | 13 |
pre-chordal neural plate | 1.81e-17 | 49 |
craniocervical region | 2.04e-15 | 36 |
neurectoderm | 2.86e-13 | 64 |
neural plate | 2.86e-13 | 64 |
presumptive neural plate | 2.86e-13 | 64 |
anterior region of body | 7.53e-13 | 43 |
ecto-epithelium | 1.42e-11 | 73 |
structure with developmental contribution from neural crest | 4.56e-09 | 92 |
ectoderm-derived structure | 9.21e-09 | 95 |
ectoderm | 9.21e-09 | 95 |
presumptive ectoderm | 9.21e-09 | 95 |