FFCP PHASE1:Mm9::chr7:125743666..125743687,+: Difference between revisions
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{{FFCP|EntrezGene=74424|HGNC=|MCL_coexpression_id=12|UniProt=Q32NZ6|association_with_transcript=0bp_to_ENSMUST00000121744_5end|description=CAGE_peak_3_at_Tmc5_5end|id=chr7:125743666..125743687,+|ontology_enrichment_celltype=CL:0002563!4.55e-08!9;CL:0002251!4.55e-08!9;CL:0002076!3.83e-07!15;CL:0000239!7.68e-07!6;CL:0000677!7.68e-07!6;CL:0000212!7.68e-07!6;CL:0000584!7.68e-07!6|ontology_enrichment_celltype_v019_2=CL:0002563,6.91e-10,9;CL:0002251,6.91e-10,9;CL:0000239,7.39e-10,6;CL:0000677,7.39e-10,6;CL:0000584,7.39e-10,6;CL:0002076,9.79e-10,15;CL:0000066,1.26e-08,25;CL:0000075,2.75e-08,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!5.54e-18!43;UBERON:0005409!1.06e-16!59;UBERON:0000344!4.24e-13!15;UBERON:0001242!1.40e-11!13;UBERON:0000060!1.40e-11!13;UBERON:0001262!1.40e-11!13;UBERON:0004786!1.40e-11!13;UBERON:0004119!5.37e-11!130;UBERON:0000925!5.37e-11!130;UBERON:0006595!5.37e-11!130;UBERON:0001007!3.08e-10!128;UBERON:0001555!3.08e-10!128;UBERON:0007026!3.08e-10!128;UBERON:0004921!2.86e-09!126;UBERON:0004185!2.86e-09!126;UBERON:0004923!3.23e-09!24;UBERON:0003350!4.55e-08!9;UBERON:0004808!4.55e-08!9;UBERON:0001277!4.55e-08!9|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.08e-34,31;UBERON:0005409,1.22e-28,47;UBERON:0000344,1.13e-17,15;UBERON:0001242,2.68e-15,13;UBERON:0001262,2.68e-15,13;UBERON:0004786,2.68e-15,13;UBERON:0004923,1.12e-12,24;UBERON:0004119,3.10e-11,118;UBERON:0000925,3.10e-11,118;UBERON:0006595,3.10e-11,118;UBERON:0001007,9.26e-11,116;UBERON:0001555,9.26e-11,116;UBERON:0007026,9.26e-11,116;UBERON:0003350,6.91e-10,9;UBERON:0004808,6.91e-10,9;UBERON:0001277,6.91e-10,9;UBERON:0004921,1.76e-09,114;UBERON:0000485,8.98e-08,11;UBERON:0002108,6.60e-07,4|phase1_expression=0,20.5895490507223,25.9349566452036,24.8020653271601,32.0573267165662,4.02910252588535,7.2419918584613,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,5.75972722056264,8.02932483735095,19.5238867799107,16.7997178502039,12.4973314957816,24.7030445293286,9.8291750606373,9.97787297948871,0,0,0,1.1554064790051,0.664938581433969,1.22501613757421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.842666520790511,0,0,0,0,0,0,0,2.38140145112336,2.53359865475099,2.52762222507392,3.08296475241462,0,0,0,0,0,0,0,0,2.22475470960936,0,0,0,0,0,18.6391761218122,0,0,14.3055950916811,0,0,0,0,0,0,0,0,0,0,0.611036183101898,3.6078021476927,37.9084137650512,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,32.3810407324122,17.982638533121,0,0,2.70621668776396,7.05892336181699,11.1189021922435,11.7939888189787,10.9141684155238,20.9167672499494,14.0747716928151,15.7175612912509,14.622306533934,23.3693046250098,12.752144942607,15.9313018603494,0,0,0,0,0,0.280543279561274,0.126473074248515,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554259570499814,0,0,0.169745085775188,0,0,0,0,0,0.221464689648775,0.159454768657487,0,0,0.433947175744535,0,0,1.47529281905711,0.827810238914197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.851640511249612,0.178065603667255,0,4.78413356620353,0,0,0.604647113929502,0,0,0,5.68542244970086,0,0,0.316036757935816,3.16255825724996,0,0,0,0,0,0,0,0,0,0.23467170806371,6.77862626764225,0,0,0,0,0,0,18.6547735443104,0,0,0,0,0,0,0,0,0,0,3.81868247206045,0,0,0.648032044930808,0,3.71216358368502,2.42755823492677,1.32245529160537,0.785267825952089,33.6998930558661,0.621339313086926,0,0,0,0,0,0,0,0.39061315453185,0,0,1.15212002503146,0,0.202725215290164,0.616265742988964,0.649604114888975,1.07416017400489,0.79472541912506,0.120195449519969,0.590758108698309,0.504832249740738,0.533447646584999,0.201652370273681,0,0,0.116876902181569,1.36038230169127,0,0,0,0,0,0.183151624267265,0.643105137237198,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.888986911206461,0.824140228955577,0.64183841918363,1.76888048234658,1.52087579934144,0.188626341386076,0.842773567228942,1.02440243847791,0.689225627467359,2.38146845641537,0.347652977834566,0.964546102318525,1.64834360321323,1.47198920134397,1.02860775715625,0.354951612318675,0.238436189947321,1.0174249164263,0.941093804153306,1.01537529470012,0.73171189149109,0.526139422875686,0.679020569229309,1.68342681497322,0.355905054372522,0.689531376628944,0.818462086339379,1.08455788830176,0.771626443924566,0.249810577937946,1.87145286756327,1.71896843238639,0,0,0|short_description=p3@Tmc5}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=74424 | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=Q32NZ6 | |||
|association_with_transcript=0bp_to_ENSMUST00000121744_5end | |||
|cluster_id=chr7:125743666..125743687,+ | |||
|description=CAGE_peak_3_at_Tmc5_5end | |||
|id=chr7:125743666..125743687,+ | |||
|ontology_enrichment_celltype=CL:0002563!4.55e-08!9;CL:0002251!4.55e-08!9;CL:0002076!3.83e-07!15;CL:0000239!7.68e-07!6;CL:0000677!7.68e-07!6;CL:0000212!7.68e-07!6;CL:0000584!7.68e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,6.91e-10,9;CL:0002251,6.91e-10,9;CL:0000239,7.39e-10,6;CL:0000677,7.39e-10,6;CL:0000584,7.39e-10,6;CL:0002076,9.79e-10,15;CL:0000066,1.26e-08,25;CL:0000075,2.75e-08,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!5.54e-18!43;UBERON:0005409!1.06e-16!59;UBERON:0000344!4.24e-13!15;UBERON:0001242!1.40e-11!13;UBERON:0000060!1.40e-11!13;UBERON:0001262!1.40e-11!13;UBERON:0004786!1.40e-11!13;UBERON:0004119!5.37e-11!130;UBERON:0000925!5.37e-11!130;UBERON:0006595!5.37e-11!130;UBERON:0001007!3.08e-10!128;UBERON:0001555!3.08e-10!128;UBERON:0007026!3.08e-10!128;UBERON:0004921!2.86e-09!126;UBERON:0004185!2.86e-09!126;UBERON:0004923!3.23e-09!24;UBERON:0003350!4.55e-08!9;UBERON:0004808!4.55e-08!9;UBERON:0001277!4.55e-08!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.08e-34,31;UBERON:0005409,1.22e-28,47;UBERON:0000344,1.13e-17,15;UBERON:0001242,2.68e-15,13;UBERON:0001262,2.68e-15,13;UBERON:0004786,2.68e-15,13;UBERON:0004923,1.12e-12,24;UBERON:0004119,3.10e-11,118;UBERON:0000925,3.10e-11,118;UBERON:0006595,3.10e-11,118;UBERON:0001007,9.26e-11,116;UBERON:0001555,9.26e-11,116;UBERON:0007026,9.26e-11,116;UBERON:0003350,6.91e-10,9;UBERON:0004808,6.91e-10,9;UBERON:0001277,6.91e-10,9;UBERON:0004921,1.76e-09,114;UBERON:0000485,8.98e-08,11;UBERON:0002108,6.60e-07,4 | |||
|phase1_expression=0,20.5895490507223,25.9349566452036,24.8020653271601,32.0573267165662,4.02910252588535,7.2419918584613,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,5.75972722056264,8.02932483735095,19.5238867799107,16.7997178502039,12.4973314957816,24.7030445293286,9.8291750606373,9.97787297948871,0,0,0,1.1554064790051,0.664938581433969,1.22501613757421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.842666520790511,0,0,0,0,0,0,0,2.38140145112336,2.53359865475099,2.52762222507392,3.08296475241462,0,0,0,0,0,0,0,0,2.22475470960936,0,0,0,0,0,18.6391761218122,0,0,14.3055950916811,0,0,0,0,0,0,0,0,0,0,0.611036183101898,3.6078021476927,37.9084137650512,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,32.3810407324122,17.982638533121,0,0,2.70621668776396,7.05892336181699,11.1189021922435,11.7939888189787,10.9141684155238,20.9167672499494,14.0747716928151,15.7175612912509,14.622306533934,23.3693046250098,12.752144942607,15.9313018603494,0,0,0,0,0,0.280543279561274,0.126473074248515,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554259570499814,0,0,0.169745085775188,0,0,0,0,0,0.221464689648775,0.159454768657487,0,0,0.433947175744535,0,0,1.47529281905711,0.827810238914197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.851640511249612,0.178065603667255,0,4.78413356620353,0,0,0.604647113929502,0,0,0,5.68542244970086,0,0,0.316036757935816,3.16255825724996,0,0,0,0,0,0,0,0,0,0.23467170806371,6.77862626764225,0,0,0,0,0,0,18.6547735443104,0,0,0,0,0,0,0,0,0,0,3.81868247206045,0,0,0.648032044930808,0,3.71216358368502,2.42755823492677,1.32245529160537,0.785267825952089,33.6998930558661,0.621339313086926,0,0,0,0,0,0,0,0.39061315453185,0,0,1.15212002503146,0,0.202725215290164,0.616265742988964,0.649604114888975,1.07416017400489,0.79472541912506,0.120195449519969,0.590758108698309,0.504832249740738,0.533447646584999,0.201652370273681,0,0,0.116876902181569,1.36038230169127,0,0,0,0,0,0.183151624267265,0.643105137237198,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.888986911206461,0.824140228955577,0.64183841918363,1.76888048234658,1.52087579934144,0.188626341386076,0.842773567228942,1.02440243847791,0.689225627467359,2.38146845641537,0.347652977834566,0.964546102318525,1.64834360321323,1.47198920134397,1.02860775715625,0.354951612318675,0.238436189947321,1.0174249164263,0.941093804153306,1.01537529470012,0.73171189149109,0.526139422875686,0.679020569229309,1.68342681497322,0.355905054372522,0.689531376628944,0.818462086339379,1.08455788830176,0.771626443924566,0.249810577937946,1.87145286756327,1.71896843238639,0,0,0 | |||
|short_description=p3@Tmc5 | |||
}} |
Latest revision as of 19:02, 25 September 2015
Short description: | p3@Tmc5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Tmc5_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 0bp_to_ENSMUST00000121744_5end |
EntrezGene: | Tmc5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 6.91e-10 | 9 |
epithelial cell of alimentary canal | 6.91e-10 | 9 |
brush border epithelial cell | 7.39e-10 | 6 |
gut absorptive cell | 7.39e-10 | 6 |
enterocyte | 7.39e-10 | 6 |
endo-epithelial cell | 9.79e-10 | 15 |
epithelial cell | 1.26e-08 | 25 |
columnar/cuboidal epithelial cell | 2.75e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.08e-34 | 31 |
gastrointestinal system | 1.22e-28 | 47 |
mucosa | 1.13e-17 | 15 |
intestinal mucosa | 2.68e-15 | 13 |
wall of intestine | 2.68e-15 | 13 |
gastrointestinal system mucosa | 2.68e-15 | 13 |
organ component layer | 1.12e-12 | 24 |
endoderm-derived structure | 3.10e-11 | 118 |
endoderm | 3.10e-11 | 118 |
presumptive endoderm | 3.10e-11 | 118 |
digestive system | 9.26e-11 | 116 |
digestive tract | 9.26e-11 | 116 |
primitive gut | 9.26e-11 | 116 |
epithelium of mucosa | 6.91e-10 | 9 |
gastrointestinal system epithelium | 6.91e-10 | 9 |
intestinal epithelium | 6.91e-10 | 9 |
subdivision of digestive tract | 1.76e-09 | 114 |
simple columnar epithelium | 8.98e-08 | 11 |
small intestine | 6.60e-07 | 4 |