FFCP PHASE1:Mm9::chr10:128241431..128241451,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:128241431..128241451,-
|short_description=p2@Tmem198b
|description=CAGE_peak_2_at_Tmem198b_5end
|association_with_transcript=-5bp_to_ENSMUST00000051011,NM...") |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=73827 | |EntrezGene=73827 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1231 | |||
|TSSclassifier=NA | |||
|UniProt=Q8CFU0 | |UniProt=Q8CFU0 | ||
|association_with_transcript=-5bp_to_ENSMUST00000051011,NM_178066,uc007hoi.1_5end | |||
|cluster_id=chr10:128241431..128241451,- | |||
|description=CAGE_peak_2_at_Tmem198b_5end | |||
|id=chr10:128241431..128241451,- | |||
|ontology_enrichment_celltype=CL:0000055!2.92e-14!50;CL:0000221!1.83e-13!44;CL:0000133!1.83e-13!44;CL:0002319!5.92e-13!43;CL:0000393!4.25e-09!39;CL:0000211!4.25e-09!39;CL:0000333!1.45e-07!10;CL:0000095!1.45e-07!10;CL:0000243!1.45e-07!10;CL:0000123!1.45e-07!10;CL:0000125!1.45e-07!10;CL:0000030!1.45e-07!10;CL:0000339!1.45e-07!10;CL:0000540!1.85e-07!33;CL:0000047!1.85e-07!33;CL:0000031!1.85e-07!33;CL:0000404!1.85e-07!33;CL:0000107!4.54e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,7.27e-14,44;CL:0000133,7.27e-14,44;CL:0002319,2.49e-13,43;CL:0000393,2.70e-09,39;CL:0000211,2.70e-09,39;CL:0000333,6.52e-08,10;CL:0000095,6.52e-08,10;CL:0000243,6.52e-08,10;CL:0000123,6.52e-08,10;CL:0000125,6.52e-08,10;CL:0000030,6.52e-08,10;CL:0000339,6.52e-08,10;CL:0000540,1.43e-07,33;CL:0000047,1.43e-07,33;CL:0000031,1.43e-07,33;CL:0000404,1.43e-07,33;CL:0000107,2.18e-07,9;CL:0002321,3.04e-07,70;CL:0002453,9.25e-07,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!1.48e-11!102;UBERON:0000924!1.48e-11!102;UBERON:0006601!1.48e-11!102;UBERON:0000073!5.53e-11!75;UBERON:0001016!5.53e-11!75;UBERON:0001017!4.55e-10!73;UBERON:0005743!4.55e-10!73;UBERON:0000010!3.67e-08!11;UBERON:0002410!4.54e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.65e-10,75;UBERON:0004121,2.42e-09,95;UBERON:0000924,2.42e-09,95;UBERON:0006601,2.42e-09,95;UBERON:0001017,2.99e-09,73;UBERON:0000010,1.53e-08,11;UBERON:0002410,2.18e-07,9 | |||
|phase1_expression=2.40223270657191,0,0,0,0,0,0.467225281191051,0,0.563154888606667,0.234064526321993,0,0,0.171200729931206,0,0,0,0,0.157731082679119,0.548457734422955,0.42438965179803,1.44573593256819,0.0992909512008853,0,0.159992422793407,0.22940928106717,0,0,0,0,0,0,0,0,0,0.866554859253824,0.498703936075477,0.408338712524738,0,0,0,0,0,0,2.39203954153597,1.92616169317078,2.9367480345869,19.559783608701,6.97680500417429,12.9614847813338,9.3326351555656,13.0187372111587,5.75010257459886,0.671130424230945,0,0,7.71778308107841,3.15186783932632,4.12537673821954,0.606949382578793,1.5869729378161,3.80298842103708,14.9091594110418,13.3394219416671,2.2497492932035,0.988866362566974,3.5524005747305,16.1784059679939,26.5110630671873,0.933206510776299,1.4850653216486,1.68259969081106,3.71346279724945,6.18431914664518,1.10241719293459,1.53352753629178,0,5.50579404996943,1.65993539510744,3.22573719838111,1.97829431595291,2.19570344645783,2.08365348222704,5.862842979029,2.25105044012672,3.36156145108982,4.41942878210502,3.84403538157578,2.05039390407831,4.69502398665741,15.5677413819978,3.18850937571846,0.860423876981386,0,0,0,0,0.561777680527007,6.13549161281008,5.45550609666024,7.77347063922748,5.7745802108439,14.115912515575,2.54805239706646,0,0.865964164044856,0.506719730950197,0,0.11418387971906,0.517875767294343,0.593768556259299,3.99016251562112,2.43572382649713,3.45923245884088,2.26083960828934,2.4693628498498,2.13633205260448,0.247194967734374,2.4581890676385,0,1.45590164952668,1.10420759230197,1.93950101254089,0,2.04946557908083,2.09446706813455,0.255457055208591,6.82946209683746,4.19931911695385,3.30382590389968,1.04853447583376,1.37250180845588,1.50785222535437,1.04294592115366,1.02286182932132,2.0778804455956,0.162241263067758,3.25885964321012,0.622034853050465,1.26361379216837,1.26265113531884,2.21204753036596,2.06911893990126,1.0803727788321,3.16480117455002,2.10913147369116,2.0498195245576,2.24884138943349,0.517406741478031,1.5089759505299,2.64748512234947,5.45448484908241,1.31517439456545,2.50242524303038,4.179025998266,5.55611768301447,2.18937693500343,2.80885274925294,2.05878325691772,5.11494298912067,1.44988040774851,1.64168241986767,1.98068267607116,0.946978942340841,3.14822770795846,2.00547246753592,3.25547522650571,1.87791380979733,1.63471479314037,1.31647879930784,1.31333971263276,1.70244500046297,1.46199987425332,1.3173006917463,1.47627060636409,1.05144974282064,1.85228302282712,0,0.264450566663544,1.70630600428187,1.85789337488351,1.15980715189884,1.21010114774006,1.55664630691409,0.951128130562796,0.474529061544512,1.15289268306808,1.50801125280162,0.596869416123452,1.16978452271472,2.69645822596266,0.216138049874694,0.398282546508734,2.0863469104839,2.51346727741403,0,0.814605311381257,0.969762435838129,1.54298803758701,2.02356918797623,0.147610147979602,0.784993639206874,0.493588655687202,0,0.83422552858047,0.196558995113203,0.449724224769707,0,0.72353147925725,0.25462585178142,1.43848068725405,0.324270453550071,0.274561413188081,0,0.744281895337007,1.24815069245824,0,0,0.964887042726734,1.29327233116623,0.947457058852424,1.95557971730431,2.03694102930226,2.11221223459652,1.17254380209271,1.90434912708811,4.09780660501378,1.57635144106191,1.55025282754142,1.2756381492599,0.983179888294428,0.690739927463582,1.59113964439663,0,5.98296252200581,0.491764273019036,0.551873492609465,1.44495530989013,1.64096361229084,1.96721934452011,1.51482556322624,6.62567260774139,8.98009111882268,10.1248996934415,16.2498782607735,16.4871018820972,15.5692091933858,8.50102473517278,8.76767573733936,9.09161889277004,4.4984984299053,1.98716119291576,4.98583690268315,4.0721739838394,6.92874516484649,1.32745138339963,1.69946445308487,0.604647113929502,1.50884063804718,0.885905678642318,2.45948118355142,2.58428293168221,1.45413491791002,1.06949213515416,0.632073515871632,0,0,0.680879211507576,3.78128297465751,6.59729287292048,4.92975180572662,4.25616560741457,1.96205699362278,3.1264313914403,2.13125464380219,1.17335854031855,0.42366414172764,0.441056796109924,0.98931751764888,4.52100394748536,3.01564624640779,1.55184047204077,1.80554989719567,1.1659233465194,2.03967832211561,0,0.206386867963223,0.555583582109135,0.565105371014073,0.136694227721025,0,8.32894306969891,8.6769900440668,7.60099855924331,0.954670618015114,1.89801596148681,1.62655573701479,1.94409613479242,1.46361807210128,0.87345025498471,1.21377911746339,0.991841468704031,0.523511883968059,0.388844919875379,0,0,2.24274819065968,1.98550188548517,1.36115831840833,0.774958940866387,2.02747350588934,1.40828686374905,1.0416350787516,0.629156066554265,0,0.288030006257865,0,1.21635129174099,1.84879722896689,0.51968329191118,0.716106782669926,0.596044064343795,0.360586348559907,0.147689527174577,0.201932899896295,0.0762068066549998,0,0.194915761479505,0,0.467507608726276,1.36038230169127,0.443971906748129,0.448569283047378,0,0.772758376128762,3.37828455812128,4.02933573387983,1.2862102744744,0.501572104035363,1.6942555278512,0.920650473014354,0.572895513439397,0.859265911718438,0.685082519770642,2.2661816921691,0.675022500231806,0.900642406448441,1.35942722695261,1.55328093525546,1.97195960409936,2.39414924040619,3.41467211508268,2.43106717068294,1.25767897576789,1.10306105070008,2.44471400581777,2.06035057238894,2.88827288632634,2.02157769411038,2.5347929989024,3.2066478035633,3.27745276144588,2.04880487695582,2.1825478203133,2.38146845641537,1.85414921511769,2.12200142510076,2.47251540481984,2.64958056241915,1.37147700954166,3.54951612318675,1.43061713968393,2.76158191601424,1.78807822789128,2.11536519729191,1.82927972872773,2.63069711437843,2.30866993537965,2.24456908663095,2.01679530811096,1.87158516513571,2.45538625901814,1.85924209423159,2.70069255373598,1.99848462350357,1.87145286756327,3.22306581072447,2.86932498103265,2.64709702943419,2.31867835620421 | |phase1_expression=2.40223270657191,0,0,0,0,0,0.467225281191051,0,0.563154888606667,0.234064526321993,0,0,0.171200729931206,0,0,0,0,0.157731082679119,0.548457734422955,0.42438965179803,1.44573593256819,0.0992909512008853,0,0.159992422793407,0.22940928106717,0,0,0,0,0,0,0,0,0,0.866554859253824,0.498703936075477,0.408338712524738,0,0,0,0,0,0,2.39203954153597,1.92616169317078,2.9367480345869,19.559783608701,6.97680500417429,12.9614847813338,9.3326351555656,13.0187372111587,5.75010257459886,0.671130424230945,0,0,7.71778308107841,3.15186783932632,4.12537673821954,0.606949382578793,1.5869729378161,3.80298842103708,14.9091594110418,13.3394219416671,2.2497492932035,0.988866362566974,3.5524005747305,16.1784059679939,26.5110630671873,0.933206510776299,1.4850653216486,1.68259969081106,3.71346279724945,6.18431914664518,1.10241719293459,1.53352753629178,0,5.50579404996943,1.65993539510744,3.22573719838111,1.97829431595291,2.19570344645783,2.08365348222704,5.862842979029,2.25105044012672,3.36156145108982,4.41942878210502,3.84403538157578,2.05039390407831,4.69502398665741,15.5677413819978,3.18850937571846,0.860423876981386,0,0,0,0,0.561777680527007,6.13549161281008,5.45550609666024,7.77347063922748,5.7745802108439,14.115912515575,2.54805239706646,0,0.865964164044856,0.506719730950197,0,0.11418387971906,0.517875767294343,0.593768556259299,3.99016251562112,2.43572382649713,3.45923245884088,2.26083960828934,2.4693628498498,2.13633205260448,0.247194967734374,2.4581890676385,0,1.45590164952668,1.10420759230197,1.93950101254089,0,2.04946557908083,2.09446706813455,0.255457055208591,6.82946209683746,4.19931911695385,3.30382590389968,1.04853447583376,1.37250180845588,1.50785222535437,1.04294592115366,1.02286182932132,2.0778804455956,0.162241263067758,3.25885964321012,0.622034853050465,1.26361379216837,1.26265113531884,2.21204753036596,2.06911893990126,1.0803727788321,3.16480117455002,2.10913147369116,2.0498195245576,2.24884138943349,0.517406741478031,1.5089759505299,2.64748512234947,5.45448484908241,1.31517439456545,2.50242524303038,4.179025998266,5.55611768301447,2.18937693500343,2.80885274925294,2.05878325691772,5.11494298912067,1.44988040774851,1.64168241986767,1.98068267607116,0.946978942340841,3.14822770795846,2.00547246753592,3.25547522650571,1.87791380979733,1.63471479314037,1.31647879930784,1.31333971263276,1.70244500046297,1.46199987425332,1.3173006917463,1.47627060636409,1.05144974282064,1.85228302282712,0,0.264450566663544,1.70630600428187,1.85789337488351,1.15980715189884,1.21010114774006,1.55664630691409,0.951128130562796,0.474529061544512,1.15289268306808,1.50801125280162,0.596869416123452,1.16978452271472,2.69645822596266,0.216138049874694,0.398282546508734,2.0863469104839,2.51346727741403,0,0.814605311381257,0.969762435838129,1.54298803758701,2.02356918797623,0.147610147979602,0.784993639206874,0.493588655687202,0,0.83422552858047,0.196558995113203,0.449724224769707,0,0.72353147925725,0.25462585178142,1.43848068725405,0.324270453550071,0.274561413188081,0,0.744281895337007,1.24815069245824,0,0,0.964887042726734,1.29327233116623,0.947457058852424,1.95557971730431,2.03694102930226,2.11221223459652,1.17254380209271,1.90434912708811,4.09780660501378,1.57635144106191,1.55025282754142,1.2756381492599,0.983179888294428,0.690739927463582,1.59113964439663,0,5.98296252200581,0.491764273019036,0.551873492609465,1.44495530989013,1.64096361229084,1.96721934452011,1.51482556322624,6.62567260774139,8.98009111882268,10.1248996934415,16.2498782607735,16.4871018820972,15.5692091933858,8.50102473517278,8.76767573733936,9.09161889277004,4.4984984299053,1.98716119291576,4.98583690268315,4.0721739838394,6.92874516484649,1.32745138339963,1.69946445308487,0.604647113929502,1.50884063804718,0.885905678642318,2.45948118355142,2.58428293168221,1.45413491791002,1.06949213515416,0.632073515871632,0,0,0.680879211507576,3.78128297465751,6.59729287292048,4.92975180572662,4.25616560741457,1.96205699362278,3.1264313914403,2.13125464380219,1.17335854031855,0.42366414172764,0.441056796109924,0.98931751764888,4.52100394748536,3.01564624640779,1.55184047204077,1.80554989719567,1.1659233465194,2.03967832211561,0,0.206386867963223,0.555583582109135,0.565105371014073,0.136694227721025,0,8.32894306969891,8.6769900440668,7.60099855924331,0.954670618015114,1.89801596148681,1.62655573701479,1.94409613479242,1.46361807210128,0.87345025498471,1.21377911746339,0.991841468704031,0.523511883968059,0.388844919875379,0,0,2.24274819065968,1.98550188548517,1.36115831840833,0.774958940866387,2.02747350588934,1.40828686374905,1.0416350787516,0.629156066554265,0,0.288030006257865,0,1.21635129174099,1.84879722896689,0.51968329191118,0.716106782669926,0.596044064343795,0.360586348559907,0.147689527174577,0.201932899896295,0.0762068066549998,0,0.194915761479505,0,0.467507608726276,1.36038230169127,0.443971906748129,0.448569283047378,0,0.772758376128762,3.37828455812128,4.02933573387983,1.2862102744744,0.501572104035363,1.6942555278512,0.920650473014354,0.572895513439397,0.859265911718438,0.685082519770642,2.2661816921691,0.675022500231806,0.900642406448441,1.35942722695261,1.55328093525546,1.97195960409936,2.39414924040619,3.41467211508268,2.43106717068294,1.25767897576789,1.10306105070008,2.44471400581777,2.06035057238894,2.88827288632634,2.02157769411038,2.5347929989024,3.2066478035633,3.27745276144588,2.04880487695582,2.1825478203133,2.38146845641537,1.85414921511769,2.12200142510076,2.47251540481984,2.64958056241915,1.37147700954166,3.54951612318675,1.43061713968393,2.76158191601424,1.78807822789128,2.11536519729191,1.82927972872773,2.63069711437843,2.30866993537965,2.24456908663095,2.01679530811096,1.87158516513571,2.45538625901814,1.85924209423159,2.70069255373598,1.99848462350357,1.87145286756327,3.22306581072447,2.86932498103265,2.64709702943419,2.31867835620421 | ||
|short_description=p2@Tmem198b | |||
}} | }} |
Latest revision as of 19:23, 25 September 2015
Short description: | p2@Tmem198b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Tmem198b_5end |
Coexpression cluster: | MCL_coexpression_mm9:1231 |
Association with transcript: | -5bp_to_ENSMUST00000051011, NM_178066, uc007hoi.1_5end |
EntrezGene: | Tmem198b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 7.27e-14 | 44 |
neurectodermal cell | 7.27e-14 | 44 |
neural cell | 2.49e-13 | 43 |
electrically responsive cell | 2.70e-09 | 39 |
electrically active cell | 2.70e-09 | 39 |
migratory neural crest cell | 6.52e-08 | 10 |
neuron associated cell | 6.52e-08 | 10 |
glial cell (sensu Vertebrata) | 6.52e-08 | 10 |
neuron associated cell (sensu Vertebrata) | 6.52e-08 | 10 |
glial cell | 6.52e-08 | 10 |
glioblast | 6.52e-08 | 10 |
glioblast (sensu Vertebrata) | 6.52e-08 | 10 |
neuron | 1.43e-07 | 33 |
neuronal stem cell | 1.43e-07 | 33 |
neuroblast | 1.43e-07 | 33 |
electrically signaling cell | 1.43e-07 | 33 |
autonomic neuron | 2.18e-07 | 9 |
embryonic cell | 3.04e-07 | 70 |
oligodendrocyte precursor cell | 9.25e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
nervous system | 3.65e-10 | 75 |
ectoderm-derived structure | 2.42e-09 | 95 |
ectoderm | 2.42e-09 | 95 |
presumptive ectoderm | 2.42e-09 | 95 |
central nervous system | 2.99e-09 | 73 |
peripheral nervous system | 1.53e-08 | 11 |
autonomic nervous system | 2.18e-07 | 9 |