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FFCP PHASE1:Mm9::chr14:28149209..28149253,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=71704
|EntrezGene=71704
|HGNC=
|HGNC=
|MCL_coexpression_id=7
|TSSclassifier=NA
|UniProt=Q91X46
|UniProt=Q91X46
|association_with_transcript=0bp_to_uc007str.1_5end
|association_with_transcript=0bp_to_uc007str.1_5end
|cluster_id=chr14:28149209..28149253,+
|description=CAGE_peak_1_at_Arhgef3_5end
|description=CAGE_peak_1_at_Arhgef3_5end
|id=chr14:28149209..28149253,+
|id=chr14:28149209..28149253,+
|ontology_enrichment_celltype=CL:0000791!4.25e-07!9;CL:0000789!4.25e-07!9;CL:0002420!4.25e-07!9;CL:0002419!4.25e-07!9;CL:0000790!4.25e-07!9
|ontology_enrichment_celltype=CL:0000791!4.25e-07!9;CL:0000789!4.25e-07!9;CL:0002420!4.25e-07!9;CL:0002419!4.25e-07!9;CL:0000790!4.25e-07!9
|ontology_enrichment_celltype_v019_2=CL:0000791,4.24e-07,9;CL:0000789,4.24e-07,9;CL:0002420,4.24e-07,9;CL:0002419,4.24e-07,9;CL:0000790,4.24e-07,9
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0007023!2.07e-08!51;UBERON:0002021!6.99e-07!10;UBERON:0000411!6.99e-07!10;UBERON:0001950!6.99e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.06e-08,51;UBERON:0002021,6.98e-07,10;UBERON:0000411,6.98e-07,10;UBERON:0001950,6.98e-07,10
|phase1_expression=11.8510146857548,3.14077866875425,6.3699893514535,9.67885476181856,10.0179145989269,5.54001597309236,4.43864017131499,223.125102907044,1788.43913749262,2020.91312026409,439.17408849842,331.054459830646,74.8147189799369,74.2199216537288,36.6420737997229,33.6108943867111,14.6907994406911,231.233767207588,219.520208202788,159.146119424261,27.5540260089466,5.85816612085223,1.30599894569468,19.5190755807956,16.0586496747019,7.46501553349526,4.73838195774982,4.95583835177545,4.94060890586572,8.56902441183765,2.88249663851896,0,0,0,0.577703239502549,1.16364251750945,2.04169356262369,16.7412652294763,9.37602413428561,15.1821885752402,37.6468152339849,33.4692287629638,24.2755176515577,1.38486499773135,1.01376931219515,1.65192076945513,0,1.74420125104357,3.29529274101708,14.7766723296455,0.279972843250725,7.18762821824858,113.253259088972,97.1985270295202,143.848146032975,1.02903774414379,4.87106847895886,7.73508138416164,2.02316460859598,3.70293685490423,5.07065122804943,0,0,5.84934816232909,21.7550599764734,10.6572017241915,8.08920298399693,4.61061966385865,0.103689612308478,1.4850653216486,0.630974884054146,5.71301968807607,5.96345060569357,3.06226998037385,1.62937300731002,1.83843757322004,18.7196997698961,27.9635270406561,29.3388478519425,4.48413378282659,3.47653045689157,2.08365348222704,22.8930059181132,16.8828783009504,23.2253336620751,8.83885756421003,9.8236459751381,4.28718725398191,6.36100023998746,14.2074533000757,53.045201432407,20.6501730475533,233.910138795466,30.2233787317178,21.4426217757731,20.6092368064774,20.926218599631,0,0,0,7.18301440861071,0,0,0,47.4115379814559,49.6585336331193,55.1021645066114,43.1615065338047,176.854574531018,17.5161724096493,10.235634279202,15.8322048722313,14.9900073216438,16.4287678202359,23.6353301342767,9.17366116706631,251.397282185858,27.4738778147832,36.2690326299448,9.70601099684455,12.367125033782,12.1218813283806,18.6391761218122,61.4839673724249,73.5157940915227,14.0501380364725,63.9812764861614,23.3962065087429,27.1930285936358,22.0192239925089,89.6701181524508,14.4502504929794,71.2679712788333,66.7417343632163,31.7915708176127,47.6989313419207,9.16554274652847,22.766475621647,8.59257378674494,80.3887889486331,4.29397461776922,5.51765050640335,5.58192602396583,8.28876498096433,10.5456573684558,8.71173297936978,8.62055865949505,42.9447595426766,17.4610074275602,29.6896545863476,29.2078866112155,17.0972671293508,23.0779216857246,21.5916343243743,22.0186885956499,7.36426787228425,13.3420505589515,5.91900186363845,8.52490498186778,2.69263504296152,8.20841209933837,4.14142741360334,4.26140524053378,7.67380503814875,7.40482141859416,8.8362899005155,9.12129564758705,10.5088808130453,6.91151369636618,8.20837320395476,11.2685645268739,8.91819923294527,14.0512073786272,15.8363574137239,96.1025064938061,10.0846520131699,16.1905203662061,3.17340679996253,6.61193576659225,8.12828351511535,7.86091514064769,10.2858597557905,13.3426826306922,12.3646656973163,7.59246498471219,25.3636390274977,12.3154252312132,23.6758201728969,17.3518037536017,8.08937467788799,9.29393614461185,11.7493351220077,7.2073802362171,6.62641373136427,13.5249282807697,8.5533557695032,6.7883370508669,17.0430042333474,13.026726647597,18.1560482014911,18.6828486131236,23.8156526369075,31.4239784712378,7.00749444007595,6.09332884850929,9.219346607779,13.5916281330297,30.1471449690521,37.6846260636501,53.7991777033016,46.5328100844352,24.7105271869273,27.3159592401974,39.4469404528614,37.1324831006327,50.7683544673695,24.0392534119362,20.7450714186248,47.4815698728174,3.60033682363921,1.95557971730431,4.58311731593008,3.28566347603903,4.69017520837084,8.09348379012447,19.1230974900643,16.3940549870439,12.6234873099802,12.437471955284,32.2810729990004,25.0393223705549,28.3512154819763,19.6028669121054,25.5635671394793,31.4729134732183,27.5936746304732,22.7981837782665,23.3251256318484,0,10.3513080153793,32.8128548192907,28.8924670779512,49.331958080811,25.5696613809231,34.0881971346063,34.2522602254487,19.4309136803949,23.0882127749936,32.8088855695615,42.4144137676785,38.8915833470656,10.8620018237026,17.2660176914791,40.5826502512437,13.2745138339963,10.4395673546642,13.302236506449,16.2200368590072,17.4228116799656,23.0576360957946,27.9102556621679,28.3556308992454,22.8158322166222,21.8065362975713,10.5418608574999,20.6271086496374,13.2771446243977,2.70091641046965,2.32845630808958,2.14337035031592,3.54680467284547,7.13475270408282,8.55654907131029,16.1366423030738,16.6616912725234,85.7919886998472,35.2845436887939,27.3711179882857,25.9957726980408,16.7066802050992,15.9958940964203,19.6969079694074,15.4484843413821,15.7611506708933,48.0147175041966,5.36605856704379,12.222838806401,22.4158463835582,46.6127316528696,45.984412814511,172.868063303751,126.23620999594,158.653569927479,21.0027535963325,4.11236791655476,10.3692928234693,14.2567049884778,20.2815647134035,22.0546189383639,24.5453110420374,29.4246302382196,23.8197907205467,10.3691978633434,44.1150912291717,6.76431526421028,4.03694674318743,6.783798108741,5.63908446197738,3.22899558694328,4.05494701177868,13.7307969215532,7.68205870579306,9.96163772044253,5.07326653734613,5.76060012515731,28.7570119771642,4.45995473638361,5.75181360123033,8.83461596249006,10.2045216530464,10.530111803407,16.3465811347158,14.9166422446323,16.1546319917036,15.39377494431,16.3338419921682,24.6568438271574,19.3385801697062,35.8812089697417,17.4582395383713,7.32553646134413,1.25599399253266,7.38692312001945,27.8193015406354,36.9734476638829,29.3042598827624,27.6535209011995,27.586465721945,75.1119950680698,83.7791930443062,69.8932526396064,56.3678438087295,85.6353149713303,80.827147020698,82.3527450282803,109.87837358671,124.161020061672,111.318467026641,5.70830411712972,4.78829848081237,9.73181552798565,11.6691224192781,11.738337107167,13.7882631337511,16.4462578573195,15.8646994073949,15.7250412699989,15.6672271293554,13.6878821940729,13.5810965797975,11.3306224038558,12.4208795665446,12.4060612944125,11.9073422820768,12.1678542242098,13.6965546529231,14.4230065281157,15.3086876939773,12.6861623382604,12.2458306249943,12.1602456873134,14.3892952466005,15.4339383881142,13.3691080468849,13.1708140468396,17.3626009548976,9.91370031074791,11.7839877048125,13.7616621024042,11.6235289203165,12.2769312950907,13.0146946596211,14.8538090455479,10.2422336954558,18.9484602840781,19.3383948643468,14.3466249051633,13.67666798541,15.9988806578091
|phase1_expression=11.8510146857548,3.14077866875425,6.3699893514535,9.67885476181856,10.0179145989269,5.54001597309236,4.43864017131499,223.125102907044,1788.43913749262,2020.91312026409,439.17408849842,331.054459830646,74.8147189799369,74.2199216537288,36.6420737997229,33.6108943867111,14.6907994406911,231.233767207588,219.520208202788,159.146119424261,27.5540260089466,5.85816612085223,1.30599894569468,19.5190755807956,16.0586496747019,7.46501553349526,4.73838195774982,4.95583835177545,4.94060890586572,8.56902441183765,2.88249663851896,0,0,0,0.577703239502549,1.16364251750945,2.04169356262369,16.7412652294763,9.37602413428561,15.1821885752402,37.6468152339849,33.4692287629638,24.2755176515577,1.38486499773135,1.01376931219515,1.65192076945513,0,1.74420125104357,3.29529274101708,14.7766723296455,0.279972843250725,7.18762821824858,113.253259088972,97.1985270295202,143.848146032975,1.02903774414379,4.87106847895886,7.73508138416164,2.02316460859598,3.70293685490423,5.07065122804943,0,0,5.84934816232909,21.7550599764734,10.6572017241915,8.08920298399693,4.61061966385865,0.103689612308478,1.4850653216486,0.630974884054146,5.71301968807607,5.96345060569357,3.06226998037385,1.62937300731002,1.83843757322004,18.7196997698961,27.9635270406561,29.3388478519425,4.48413378282659,3.47653045689157,2.08365348222704,22.8930059181132,16.8828783009504,23.2253336620751,8.83885756421003,9.8236459751381,4.28718725398191,6.36100023998746,14.2074533000757,53.045201432407,20.6501730475533,233.910138795466,30.2233787317178,21.4426217757731,20.6092368064774,20.926218599631,0,0,0,7.18301440861071,0,0,0,47.4115379814559,49.6585336331193,55.1021645066114,43.1615065338047,176.854574531018,17.5161724096493,10.235634279202,15.8322048722313,14.9900073216438,16.4287678202359,23.6353301342767,9.17366116706631,251.397282185858,27.4738778147832,36.2690326299448,9.70601099684455,12.367125033782,12.1218813283806,18.6391761218122,61.4839673724249,73.5157940915227,14.0501380364725,63.9812764861614,23.3962065087429,27.1930285936358,22.0192239925089,89.6701181524508,14.4502504929794,71.2679712788333,66.7417343632163,31.7915708176127,47.6989313419207,9.16554274652847,22.766475621647,8.59257378674494,80.3887889486331,4.29397461776922,5.51765050640335,5.58192602396583,8.28876498096433,10.5456573684558,8.71173297936978,8.62055865949505,42.9447595426766,17.4610074275602,29.6896545863476,29.2078866112155,17.0972671293508,23.0779216857246,21.5916343243743,22.0186885956499,7.36426787228425,13.3420505589515,5.91900186363845,8.52490498186778,2.69263504296152,8.20841209933837,4.14142741360334,4.26140524053378,7.67380503814875,7.40482141859416,8.8362899005155,9.12129564758705,10.5088808130453,6.91151369636618,8.20837320395476,11.2685645268739,8.91819923294527,14.0512073786272,15.8363574137239,96.1025064938061,10.0846520131699,16.1905203662061,3.17340679996253,6.61193576659225,8.12828351511535,7.86091514064769,10.2858597557905,13.3426826306922,12.3646656973163,7.59246498471219,25.3636390274977,12.3154252312132,23.6758201728969,17.3518037536017,8.08937467788799,9.29393614461185,11.7493351220077,7.2073802362171,6.62641373136427,13.5249282807697,8.5533557695032,6.7883370508669,17.0430042333474,13.026726647597,18.1560482014911,18.6828486131236,23.8156526369075,31.4239784712378,7.00749444007595,6.09332884850929,9.219346607779,13.5916281330297,30.1471449690521,37.6846260636501,53.7991777033016,46.5328100844352,24.7105271869273,27.3159592401974,39.4469404528614,37.1324831006327,50.7683544673695,24.0392534119362,20.7450714186248,47.4815698728174,3.60033682363921,1.95557971730431,4.58311731593008,3.28566347603903,4.69017520837084,8.09348379012447,19.1230974900643,16.3940549870439,12.6234873099802,12.437471955284,32.2810729990004,25.0393223705549,28.3512154819763,19.6028669121054,25.5635671394793,31.4729134732183,27.5936746304732,22.7981837782665,23.3251256318484,0,10.3513080153793,32.8128548192907,28.8924670779512,49.331958080811,25.5696613809231,34.0881971346063,34.2522602254487,19.4309136803949,23.0882127749936,32.8088855695615,42.4144137676785,38.8915833470656,10.8620018237026,17.2660176914791,40.5826502512437,13.2745138339963,10.4395673546642,13.302236506449,16.2200368590072,17.4228116799656,23.0576360957946,27.9102556621679,28.3556308992454,22.8158322166222,21.8065362975713,10.5418608574999,20.6271086496374,13.2771446243977,2.70091641046965,2.32845630808958,2.14337035031592,3.54680467284547,7.13475270408282,8.55654907131029,16.1366423030738,16.6616912725234,85.7919886998472,35.2845436887939,27.3711179882857,25.9957726980408,16.7066802050992,15.9958940964203,19.6969079694074,15.4484843413821,15.7611506708933,48.0147175041966,5.36605856704379,12.222838806401,22.4158463835582,46.6127316528696,45.984412814511,172.868063303751,126.23620999594,158.653569927479,21.0027535963325,4.11236791655476,10.3692928234693,14.2567049884778,20.2815647134035,22.0546189383639,24.5453110420374,29.4246302382196,23.8197907205467,10.3691978633434,44.1150912291717,6.76431526421028,4.03694674318743,6.783798108741,5.63908446197738,3.22899558694328,4.05494701177868,13.7307969215532,7.68205870579306,9.96163772044253,5.07326653734613,5.76060012515731,28.7570119771642,4.45995473638361,5.75181360123033,8.83461596249006,10.2045216530464,10.530111803407,16.3465811347158,14.9166422446323,16.1546319917036,15.39377494431,16.3338419921682,24.6568438271574,19.3385801697062,35.8812089697417,17.4582395383713,7.32553646134413,1.25599399253266,7.38692312001945,27.8193015406354,36.9734476638829,29.3042598827624,27.6535209011995,27.586465721945,75.1119950680698,83.7791930443062,69.8932526396064,56.3678438087295,85.6353149713303,80.827147020698,82.3527450282803,109.87837358671,124.161020061672,111.318467026641,5.70830411712972,4.78829848081237,9.73181552798565,11.6691224192781,11.738337107167,13.7882631337511,16.4462578573195,15.8646994073949,15.7250412699989,15.6672271293554,13.6878821940729,13.5810965797975,11.3306224038558,12.4208795665446,12.4060612944125,11.9073422820768,12.1678542242098,13.6965546529231,14.4230065281157,15.3086876939773,12.6861623382604,12.2458306249943,12.1602456873134,14.3892952466005,15.4339383881142,13.3691080468849,13.1708140468396,17.3626009548976,9.91370031074791,11.7839877048125,13.7616621024042,11.6235289203165,12.2769312950907,13.0146946596211,14.8538090455479,10.2422336954558,18.9484602840781,19.3383948643468,14.3466249051633,13.67666798541,15.9988806578091
|short_description=p1@Arhgef3
|short_description=p1@Arhgef3
}}
}}

Latest revision as of 20:16, 25 September 2015

Short description:p1@Arhgef3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Arhgef3_5end
Coexpression cluster:MCL_coexpression_mm9:7
Association with transcript: 0bp_to_uc007str.1_5end
EntrezGene:Arhgef3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Arhgef3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G711.85
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I53.14
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I66.37
CD326+ enterocyte, pool1.CNhs13542.11848-124I39.68
CD326+ enterocyte, pool2.CNhs13197.11849-124I410.02
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I75.54
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I84.44
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E9223.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71788.44
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F22020.91
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E6439.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F1331.05
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E474.81
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E874.22
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A136.64
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A333.61
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A514.69
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A2231.23
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A4219.52
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A6159.15
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A327.55
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H25.86
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.31
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D119.52
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D216.06
GP2+ M cell, pool1.CNhs13228.11845-124H97.47
GP2+ M cell, pool2.CNhs13231.11846-124I14.74
GP2+ M cell, pool3.CNhs13240.11847-124I24.96
Ileum epithelium, pool1.CNhs13199.10252-104B94.94
Ileum epithelium, pool2.CNhs13232.10253-104C18.57
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.88
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.16
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.04
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G816.74
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H19.38
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H315.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G937.65
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H233.47
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H424.28
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.01
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.65
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.74
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.30
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C314.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C47.19
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A2113.25
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I997.20
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A1143.85
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.03
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E14.87
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C57.74
Mouse Granule cells, donor1.CNhs12131.11713-123C32.02
Mouse Granule cells, donor2.CNhs12357.11731-123E33.70
Mouse Granule cells, donor3.CNhs12108.11636-122C75.07
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C75.85
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E721.76
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D210.66
Mouse Microglia, donor1.CNhs12629.11718-123C88.09
Mouse Microglia, donor2.CNhs12634.11736-123E84.61
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.49
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F15.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.96
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.06
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.63
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D318.72
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F327.96
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D729.34
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D44.48
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.48
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E422.89
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E516.88
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I623.23
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D68.84
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F69.82
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E14.29
Mouse Schwann, donor1.CNhs12507.11728-123D96.36
Mouse Schwann, donor2.CNhs12573.11746-123F914.21
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G353.05
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F720.65
Mouse hepatocyte, donor1.CNhs13078.11714-123C4233.91
Mouse hepatocyte, donor3.CNhs12615.11637-122C830.22
Mouse hepatocyte, donor6.CNhs13090.11822-124F421.44
Mouse hepatocyte, donor8.CNhs13091.11824-124F620.61
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A720.93
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G67.18
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G147.41
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G249.66
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G355.10
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B643.16
accessory axillary lymph node, adult.CNhs10475.1063-29H9176.85
adrenal gland, adult.CNhs10508.49-24D717.52
adrenal gland, embryo E14.CNhs11038.406-44C510.24
adrenal gland, embryo E16.CNhs11004.1254-43D615.83
adrenal gland, embryo E17.CNhs11043.1263-45I114.99
adrenal gland, embryo E18.CNhs11026.1262-18F516.43
adrenal gland, neonate N00.CNhs11191.1311-23C123.64
adrenal gland, neonate N25.CNhs11223.1377-27I39.17
amnion, adult pregnant day17.5.CNhs10488.583-22A8251.40
aorta, adult.CNhs10498.46-23H127.47
bone (os femoris), adult.CNhs10483.56-12G236.27
bone (os femoris), neonate N02.CNhs11227.1985-43F59.71
bone (os femoris), neonate N16.CNhs11225.1525-43A612.37
bone (os femoris), neonate N20.CNhs11195.1350-25C312.12
cecum, adult.CNhs10467.37-13H418.64
cerebellum, adult.CNhs10494.15-8B261.48
cerebellum, neonate N30.CNhs11135.1395-42I273.52
colon, adult.CNhs10468.36-18H714.05
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C763.98
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D123.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D427.19
corpora quadrigemina, adult.CNhs10501.16-22A422.02
corpus striatum, adult.CNhs10487.19-21D889.67
corpus striatum, neonate N00.CNhs11226.630-43F114.45
cortex, adult.CNhs10473.12-14D571.27
cortex, neonate N30.CNhs11107.1392-42F266.74
diencephalon, adult.CNhs10482.20-12F231.79
diencephalon, neonate N30.CNhs11201.1388-42B247.70
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B19.17
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A222.77
epididymis, adult.CNhs10490.58-23B28.59
eyeball, adult.CNhs10484.31-12G480.39
eyeball, embryo E12.CNhs11016.345-16C64.29
eyeball, embryo E14.CNhs10521.399-16E25.52
eyeball, embryo E15.CNhs10593.426-16C95.58
eyeball, embryo E17.CNhs11023.1261-18D48.29
eyeball, neonate N00.CNhs11207.633-15C610.55
eyeball, neonate N01.CNhs11140.1532-43E78.71
eyeball, neonate N02.CNhs11205.1551-44G88.62
eyeball, neonate N16.CNhs11188.777-19A242.94
forelimb, embryo E11.CNhs10596.335-25E217.46
forelimb, embryo E12.CNhs10600.359-14H229.69
forelimb, embryo E13.CNhs10589.384-1E229.21
forelimb, embryo E14.CNhs10577.413-26A817.10
forelimb, embryo E15.CNhs11007.437-20E723.08
forelimb, embryo E17.CNhs10598.1517-43C421.59
forelimb, embryo E18.CNhs11008.1520-43B522.02
gonad, embryo E13.CNhs11044.1564-45I67.36
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C813.34
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D25.92
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D58.52
heart, embryo E11.CNhs10586.331-24E92.69
heart, embryo E12.CNhs11015.353-12F58.21
heart, embryo E13.CNhs11013.376-3I94.14
heart, embryo E14.CNhs10597.403-26D44.26
heart, embryo E15.CNhs11017.431-16C87.67
heart, embryo E16.CNhs11021.457-17C67.40
heart, embryo E17.CNhs11025.479-18E58.84
heart, embryo E18.CNhs11030.1283-20G39.12
heart, neonate N00.CNhs11213.639-21E310.51
heart, neonate N03.CNhs11221.1349-25I26.91
heart, neonate N10.CNhs11118.749-24G18.21
heart, neonate N16.CNhs11209.782-15G111.27
heart, neonate N20.CNhs11127.821-26I68.92
heart, neonate N25.CNhs11196.1351-25D314.05
heart, neonate N30.CNhs11202.1390-42D215.84
hippocampus, adult.CNhs10478.13-16E896.10
hippocampus, neonate N00.CNhs11228.627-43G110.08
intestinal mucosa, adult.CNhs10506.860-29I316.19
intestine, adult.CNhs10496.178-9A33.17
intestine, embryo E12.CNhs11019.1251-16I56.61
intestine, embryo E13.CNhs11010.381-16D58.13
intestine, embryo E15.CNhs10602.976-16D87.86
intestine, embryo E16.CNhs10585.463-22H410.29
intestine, embryo E17.CNhs10582.482-18D313.34
intestine, embryo E18.CNhs10526.1289-20F712.36
intestine, neonate N00.CNhs11126.644-26D17.59
intestine, neonate N01.CNhs11192.1322-23E925.36
intestine, neonate N06.CNhs11102.688-20B812.32
intestine, neonate N07.CNhs11095.720-20F223.68
intestine, neonate N10.CNhs11098.755-23A517.35
intestine, neonate N20.CNhs11187.827-18D18.09
intestine, neonate N25.CNhs11121.1352-25E39.29
intestine, neonate N30.CNhs11131.1384-42G111.75
kidney, embryo E14.CNhs10606.411-4I97.21
kidney, embryo E15.CNhs10997.434-16F86.63
kidney, embryo E16.CNhs10584.464-22A513.52
kidney, embryo E17.CNhs11028.483-18I28.55
kidney, embryo E18.CNhs11001.1288-20C76.79
kidney, neonate N00.CNhs11214.646-21G717.04
kidney, neonate N10.CNhs11206.758-6D513.03
kidney, neonate N20.CNhs11113.832-19I118.16
kidney, neonate N25.CNhs11122.1353-25F318.68
kidney, neonate N30.CNhs11203.1385-42H123.82
liver, adult pregnant day01.CNhs10466.508-5B231.42
liver, embryo E12.CNhs10601.355-15F87.01
liver, embryo E13.CNhs10524.378-3H66.09
liver, embryo E14.CNhs10594.409-16E19.22
liver, embryo E15.CNhs10520.433-16D713.59
liver, embryo E16.CNhs10523.462-17F530.15
liver, embryo E17.CNhs10510.481-18A337.68
liver, embryo E18.CNhs10579.499-43G453.80
liver, neonate N00.CNhs11117.641-24F446.53
liver, neonate N03.CNhs11123.1345-25G224.71
liver, neonate N06.CNhs11101.684-20A827.32
liver, neonate N07.CNhs11103.716-20H239.45
liver, neonate N10.CNhs11115.751-24B937.13
liver, neonate N20.CNhs11220.823-25A350.77
liver, neonate N25.CNhs11198.1368-26H124.04
liver, neonate N30.CNhs11106.1382-42D120.75
lung, adult.CNhs10474.28-22B147.48
lung, embryo E12.CNhs10522.354-16G23.60
lung, embryo E14.CNhs10604.404-26F81.96
lung, embryo E15.CNhs11020.432-17C54.58
lung, embryo E16.CNhs10998.458-17B63.29
lung, embryo E17.CNhs10605.480-44A64.69
lung, embryo E18.CNhs10583.1287-20I68.09
lung, neonate N00.CNhs11224.640-42C619.12
lung, neonate N06.CNhs11212.683-20E516.39
lung, neonate N07.CNhs11111.715-19A312.62
lung, neonate N10.CNhs11219.750-23E612.44
lung, neonate N20.CNhs11109.822-18A432.28
lung, neonate N25.CNhs11119.1359-25C725.04
lung, neonate N30.CNhs11133.1394-42H228.35
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A119.60
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A125.56
mammary gland, adult lactating day02.CNhs10480.595-22B631.47
mammary gland, adult pregnant day19.CNhs10476.588-5H227.59
medulla oblongata, adult.CNhs10477.17-12C222.80
medulla oblongata, neonate N30.CNhs11200.1396-42A323.33
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C210.35
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E132.81
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E228.89
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E349.33
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D725.57
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D834.09
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D934.25
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D419.43
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D523.09
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D632.81
olfactory brain, adult.CNhs10489.18-22I942.41
ovary, adult.CNhs10507.91-2I738.89
ovary, embryo E18.CNhs11040.505-44H710.86
ovary, neonate N00.CNhs11217.1299-22I417.27
oviduct, adult pregnant day01.CNhs10500.988-6G640.58
pancreas, adult.CNhs10486.34-16E413.27
pancreas, embryo E14.CNhs11012.405-44F410.44
pancreas, embryo E15.CNhs11042.1556-45F213.30
pancreas, embryo E16.CNhs11003.460-26E516.22
pancreas, embryo E17.CNhs10599.1558-45G317.42
pancreas, embryo E18.CNhs10580.1535-43I723.06
pancreas, neonate N00.CNhs11105.645-26G927.91
pancreas, neonate N01.CNhs11138.1531-43D728.36
pancreas, neonate N02.CNhs11139.1539-43D822.82
pancreas, neonate N16.CNhs11136.787-43B621.81
pancreas, neonate N25.CNhs11094.1555-45E210.54
pancreas, neonate N30.CNhs11182.1548-44H520.63
pituitary gland, adult.CNhs10493.21-1G813.28
pituitary gland, embryo E12.CNhs11018.346-16E62.70
pituitary gland, embryo E13.CNhs11009.370-44C72.33
pituitary gland, embryo E14.CNhs11037.398-44A52.14
pituitary gland, embryo E15.CNhs10592.427-16B93.55
pituitary gland, embryo E16.CNhs11036.449-43F67.13
pituitary gland, embryo E17.CNhs11039.1265-44F58.56
pituitary gland, neonate N00.CNhs11190.1308-22E916.14
placenta, adult pregnant day10.CNhs10472.539-13I716.66
placenta, adult pregnant day17.CNhs10464.577-18G385.79
prostate, adult.CNhs10470.859-1F835.28
skin, adult.CNhs10492.30-1C327.37
skin, neonate N00.CNhs11124.650-25G426.00
skin, neonate N03.CNhs11215.662-22H316.71
skin, neonate N06.CNhs11097.693-20I516.00
skin, neonate N10.CNhs11108.762-6C419.70
small intestine, neonate N16.CNhs11114.790-21I115.45
spinal cord, adult.CNhs10505.24-13C915.76
spleen, adult.CNhs10465.25-2G248.01
spleen, embryo E16.CNhs11035.461-43C15.37
spleen, embryo E18.CNhs11011.1271-21F212.22
spleen, neonate N10.CNhs11116.752-24D122.42
spleen, neonate N20.CNhs11112.824-19H146.61
spleen, neonate N25.CNhs11099.1354-25G345.98
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C6172.87
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C9126.24
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D3158.65
stomach, adult.CNhs10503.33-1H621.00
stomach, embryo E12.CNhs10588.356-43E34.11
stomach, embryo E15.CNhs10603.1252-16G810.37
stomach, embryo E16.CNhs11022.459-17D414.26
stomach, embryo E17.CNhs11006.1035-18D520.28
stomach, embryo E18.CNhs10999.1286-20C622.05
stomach, neonate N03.CNhs11193.1340-24B824.55
stomach, neonate N07.CNhs11210.718-18A929.42
stomach, neonate N25.CNhs11104.1355-25E423.82
stomach, neonate N30.CNhs11134.1386-42I110.37
submandibular gland, adult.CNhs10469.59-29C144.12
testis, adult.CNhs10504.57-7G56.76
testis, embryo E13.CNhs11031.389-23F54.04
testis, embryo E15.CNhs11034.443-27C56.78
testis, embryo E16.CNhs11033.470-26G55.64
testis, embryo E17.CNhs11029.486-18I53.23
testis, embryo E18.CNhs11027.503-18G54.05
testis, neonate N00.CNhs11189.1300-22B713.73
testis, neonate N07.CNhs11222.726-26I47.68
testis, neonate N10.CNhs11204.763-44D99.96
testis, neonate N20.CNhs11110.839-18H35.07
testis, neonate N30.CNhs11130.1391-42E25.76
thymus, adult.CNhs10471.38-12B528.76
thymus, embryo E14.CNhs11041.402-44I44.46
thymus, embryo E15.CNhs11005.430-45I25.75
thymus, embryo E16.CNhs11002.456-26C58.83
thymus, embryo E17.CNhs10581.478-18C110.20
thymus, embryo E18.CNhs10595.1273-19G410.53
thymus, neonate N02.CNhs11181.1541-43F816.35
thymus, neonate N03.CNhs11137.2104-43C714.92
thymus, neonate N06.CNhs11197.681-26C416.15
thymus, neonate N07.CNhs11211.713-19D315.39
thymus, neonate N10.CNhs11194.748-24E416.33
thymus, neonate N20.CNhs11186.820-7A224.66
thymus, neonate N25.CNhs11125.1362-25G719.34
thymus, neonate N30.CNhs11132.1393-42G235.88
tongue, adult.CNhs10499.32-1B417.46
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H37.33
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.26
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G57.39
urinary bladder, adult.CNhs10481.879-12E427.82
uterus, adult pregnant day19.CNhs10497.590-15F536.97
uterus, adult.CNhs10509.92-27E529.30
vagina, adult.CNhs10502.89-27D527.65
vesicular gland, adult.CNhs10491.51-27F827.59
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A175.11
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A283.78
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A369.89
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D756.37
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A485.64
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A580.83
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A682.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7109.88
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8124.16
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9111.32
whole body, embryo E11.CNhs11014.324-5I85.71
whole body, embryo E12.CNhs10587.857-27C94.79
whole body, embryo E13.CNhs10512.372-23H29.73
whole body, embryo E14.5.CNhs10578.420-27D211.67
whole body, embryo E14.CNhs10519.395-14B111.74
whole body, embryo E16.CNhs10514.453-14F213.79
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G516.45
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G515.86
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G515.73
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G515.67
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G513.69
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G513.58
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G511.33
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G512.42
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G512.41
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G511.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G512.17
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G513.70
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G514.42
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G515.31
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G512.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G512.25
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G512.16
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G514.39
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G515.43
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G513.37
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G513.17
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G517.36
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G59.91
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G511.78
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G513.76
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G511.62
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G512.28
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G513.01
whole body, embryo E17.5.CNhs10513.490-9F914.85
whole body, embryo E17.CNhs10517.475-3I510.24
whole body, embryo E18.CNhs10516.493-3B318.95
whole body, neonate N00.CNhs10525.657-19C219.34
whole body, neonate N01.CNhs10576.659-23C614.35
whole body, neonate N06.CNhs10515.692-21D113.68
whole body, neonate N10.CNhs10518.761-6B416.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
mature alpha-beta T cell4.24e-079
alpha-beta T cell4.24e-079
immature T cell4.24e-079
mature T cell4.24e-079
immature alpha-beta T cell4.24e-079

Uber anatomy
Ontology termp-valuen
adult organism2.06e-0851
occipital lobe6.98e-0710
visual cortex6.98e-0710
neocortex6.98e-0710
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