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FFCP PHASE1:Mm9::chr3:89222554..89222576,+: Difference between revisions

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{{FFCP|EntrezGene=20416|HGNC=|MCL_coexpression_id=3428|UniProt=P98083|association_with_transcript=18bp_to_ENSMUST00000107417_5end|description=CAGE_peak_3_at_Shc1_5end|id=chr3:89222554..89222576,+|ontology_enrichment_celltype=CL:0000066!1.06e-08!25;CL:0000223!1.37e-08!20|ontology_enrichment_celltype_v019_2=CL:0000066,9.86e-09,25;CL:0000223,1.28e-08,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!4.83e-14!130;UBERON:0000925!4.83e-14!130;UBERON:0006595!4.83e-14!130;UBERON:0001007!1.25e-13!128;UBERON:0001555!1.25e-13!128;UBERON:0007026!1.25e-13!128;UBERON:0004921!6.14e-13!126;UBERON:0004185!6.14e-13!126;UBERON:0000160!1.02e-10!43;UBERON:0005409!1.78e-10!59;UBERON:0005256!3.17e-09!47;UBERON:0009854!2.61e-07!23;UBERON:0009856!2.61e-07!23;UBERON:0002107!9.38e-07!22;UBERON:0007499!9.38e-07!22;UBERON:0006925!9.38e-07!22;UBERON:0009497!9.38e-07!22;UBERON:0000015!9.38e-07!22;UBERON:0002423!9.38e-07!22;UBERON:0006235!9.38e-07!22;UBERON:0008835!9.38e-07!22;UBERON:0003894!9.38e-07!22;UBERON:0004161!9.38e-07!22;UBERON:0008836!9.38e-07!22|ontology_enrichment_uberon_v019_2=UBERON:0004119,4.11e-13,118;UBERON:0000925,4.11e-13,118;UBERON:0006595,4.11e-13,118;UBERON:0001007,1.01e-12,116;UBERON:0001555,1.01e-12,116;UBERON:0007026,1.01e-12,116;UBERON:0004921,4.75e-12,114;UBERON:0000160,1.21e-11,31;UBERON:0005409,1.18e-10,47;UBERON:0005256,2.34e-10,45;UBERON:0002100,1.16e-09,90;UBERON:0003104,9.09e-08,61;UBERON:0009142,9.09e-08,61;UBERON:0009854,2.47e-07,23;UBERON:0009856,2.47e-07,23;UBERON:0002107,8.90e-07,22;UBERON:0007499,8.90e-07,22;UBERON:0006925,8.90e-07,22;UBERON:0009497,8.90e-07,22;UBERON:0000015,8.90e-07,22;UBERON:0002423,8.90e-07,22;UBERON:0006235,8.90e-07,22;UBERON:0008835,8.90e-07,22;UBERON:0003894,8.90e-07,22;UBERON:0004161,8.90e-07,22;UBERON:0008836,8.90e-07,22|phase1_expression=1.28119077683835,15.0059425284925,9.09998478779072,6.65421264875026,10.0179145989269,6.37941233265181,7.00837921786577,1.93684985162364,3.37892933164,4.21316147379588,2.56826952338257,1.99430397488341,2.22560948910567,2.09808965805594,3.66420737997229,1.82227740650843,4.19737126876888,2.05050407482854,1.09691546884591,0.84877930359606,1.02051948181284,2.97872853602656,1.04479915655574,5.75972722056264,5.50582274561208,12.0588712464154,9.47676391549965,9.04979177280734,11.9714754257516,7.05684363327806,8.86922042621219,0,2.46025915033828,0,3.17736781726402,3.98963148860382,4.28755648150975,14.6486070757918,4.6880120671428,5.23523743973798,9.41170380849623,5.46436387966757,11.1667381197165,9.06457089424156,8.41428529121971,5.68994931701213,11.7358701652206,1.30815093828268,2.63623419281366,2.52758868796568,2.93971485413261,1.43752564364972,2.51673909086605,5.07753499407941,3.6970317905671,6.68874533693462,4.29800159908135,6.18806510732931,0.202316460859598,0,0.633831403506179,7.79342423759004,4.4464739805557,7.19919773825119,2.96659908770092,2.8419204597844,2.39680088414724,3.45796474789399,0.311068836925433,0.135005938331691,0.420649922702764,1.14260393761521,0.883474163806454,0.244981598429908,0.0958454710182364,0,0,0.255374676170375,0.307213066512487,0.131886287730194,0.182975287204819,0,0.279182999001381,0.56276261003168,0.45839474333043,0.294628585473668,0.569486723196412,0.186399445825301,4.08921443999194,2.34271836331035,12.1743085254705,1.72084775396277,11.5595126730318,7.55584468292944,5.84798775702902,5.82434953226536,2.52799956237153,8.01022516116871,7.01422212427746,5.3000936176551,1.26759077799012,5.13305909657271,5.09610479413291,21.3320010945999,4.5463118612355,4.30711771307668,5.56076889516262,3.31133251185274,1.8125651855302,3.56261133755579,1.73485326766136,1.82679286987285,2.53677046981664,3.3158980921577,4.46837087115678,3.76999773989026,5.6854842578906,6.79616977523585,2.65383165584962,5.17653919831709,3.3126227769059,3.39412677194655,11.1835056730873,0.878342391034642,0.628340120440365,7.15279754584056,3.95389910869537,2.39961092397363,3.55796635804581,0.449371918214468,0,0.125654352112864,0.173824320192276,0.255715457330331,0.41557608911912,0.162241263067758,3.46253837091075,3.6078021476927,5.05445516867349,4.20883711772948,0.650602214813519,0.689706313300419,0.720248519221397,1.35634336052144,1.49680298132921,1.0249097622788,0.937017245597288,1.03481348295606,3.88022387279116,2.64748512234947,3.51902248327898,3.72632745126877,3.05851974148158,5.92028683087683,1.23469281844766,1.19420560091096,5.61770549850588,3.08817488537658,3.40996199274711,2.07125772535502,2.11073453982987,2.16074473753218,2.84093682702252,0.787056926989615,1.85120535464854,1.86027155800326,0.268273401399619,2.10177616260905,1.6455984991348,2.13417703302824,2.35099547682982,1.46199987425332,2.41505126820156,2.28150911892632,0.210289948564127,0.823236899034275,3.30418782983798,5.02456076660734,1.06644125267617,2.78684006232526,3.09281907173024,4.43703754171354,5.33707305227689,8.3699275489526,5.69434873853414,11.5289268306808,11.0587491872119,14.1259095149217,13.2575579241002,8.9881940865422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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=20416
|HGNC=
|MCL_coexpression_id=3428
|TSSclassifier=NA
|UniProt=P98083
|association_with_transcript=18bp_to_ENSMUST00000107417_5end
|cluster_id=chr3:89222554..89222576,+
|description=CAGE_peak_3_at_Shc1_5end
|id=chr3:89222554..89222576,+
|ontology_enrichment_celltype=CL:0000066!1.06e-08!25;CL:0000223!1.37e-08!20
|ontology_enrichment_celltype_v019_2=CL:0000066,9.86e-09,25;CL:0000223,1.28e-08,20
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004119!4.83e-14!130;UBERON:0000925!4.83e-14!130;UBERON:0006595!4.83e-14!130;UBERON:0001007!1.25e-13!128;UBERON:0001555!1.25e-13!128;UBERON:0007026!1.25e-13!128;UBERON:0004921!6.14e-13!126;UBERON:0004185!6.14e-13!126;UBERON:0000160!1.02e-10!43;UBERON:0005409!1.78e-10!59;UBERON:0005256!3.17e-09!47;UBERON:0009854!2.61e-07!23;UBERON:0009856!2.61e-07!23;UBERON:0002107!9.38e-07!22;UBERON:0007499!9.38e-07!22;UBERON:0006925!9.38e-07!22;UBERON:0009497!9.38e-07!22;UBERON:0000015!9.38e-07!22;UBERON:0002423!9.38e-07!22;UBERON:0006235!9.38e-07!22;UBERON:0008835!9.38e-07!22;UBERON:0003894!9.38e-07!22;UBERON:0004161!9.38e-07!22;UBERON:0008836!9.38e-07!22
|ontology_enrichment_uberon_v019_2=UBERON:0004119,4.11e-13,118;UBERON:0000925,4.11e-13,118;UBERON:0006595,4.11e-13,118;UBERON:0001007,1.01e-12,116;UBERON:0001555,1.01e-12,116;UBERON:0007026,1.01e-12,116;UBERON:0004921,4.75e-12,114;UBERON:0000160,1.21e-11,31;UBERON:0005409,1.18e-10,47;UBERON:0005256,2.34e-10,45;UBERON:0002100,1.16e-09,90;UBERON:0003104,9.09e-08,61;UBERON:0009142,9.09e-08,61;UBERON:0009854,2.47e-07,23;UBERON:0009856,2.47e-07,23;UBERON:0002107,8.90e-07,22;UBERON:0007499,8.90e-07,22;UBERON:0006925,8.90e-07,22;UBERON:0009497,8.90e-07,22;UBERON:0000015,8.90e-07,22;UBERON:0002423,8.90e-07,22;UBERON:0006235,8.90e-07,22;UBERON:0008835,8.90e-07,22;UBERON:0003894,8.90e-07,22;UBERON:0004161,8.90e-07,22;UBERON:0008836,8.90e-07,22
|phase1_expression=1.28119077683835,15.0059425284925,9.09998478779072,6.65421264875026,10.0179145989269,6.37941233265181,7.00837921786577,1.93684985162364,3.37892933164,4.21316147379588,2.56826952338257,1.99430397488341,2.22560948910567,2.09808965805594,3.66420737997229,1.82227740650843,4.19737126876888,2.05050407482854,1.09691546884591,0.84877930359606,1.02051948181284,2.97872853602656,1.04479915655574,5.75972722056264,5.50582274561208,12.0588712464154,9.47676391549965,9.04979177280734,11.9714754257516,7.05684363327806,8.86922042621219,0,2.46025915033828,0,3.17736781726402,3.98963148860382,4.28755648150975,14.6486070757918,4.6880120671428,5.23523743973798,9.41170380849623,5.46436387966757,11.1667381197165,9.06457089424156,8.41428529121971,5.68994931701213,11.7358701652206,1.30815093828268,2.63623419281366,2.52758868796568,2.93971485413261,1.43752564364972,2.51673909086605,5.07753499407941,3.6970317905671,6.68874533693462,4.29800159908135,6.18806510732931,0.202316460859598,0,0.633831403506179,7.79342423759004,4.4464739805557,7.19919773825119,2.96659908770092,2.8419204597844,2.39680088414724,3.45796474789399,0.311068836925433,0.135005938331691,0.420649922702764,1.14260393761521,0.883474163806454,0.244981598429908,0.0958454710182364,0,0,0.255374676170375,0.307213066512487,0.131886287730194,0.182975287204819,0,0.279182999001381,0.56276261003168,0.45839474333043,0.294628585473668,0.569486723196412,0.186399445825301,4.08921443999194,2.34271836331035,12.1743085254705,1.72084775396277,11.5595126730318,7.55584468292944,5.84798775702902,5.82434953226536,2.52799956237153,8.01022516116871,7.01422212427746,5.3000936176551,1.26759077799012,5.13305909657271,5.09610479413291,21.3320010945999,4.5463118612355,4.30711771307668,5.56076889516262,3.31133251185274,1.8125651855302,3.56261133755579,1.73485326766136,1.82679286987285,2.53677046981664,3.3158980921577,4.46837087115678,3.76999773989026,5.6854842578906,6.79616977523585,2.65383165584962,5.17653919831709,3.3126227769059,3.39412677194655,11.1835056730873,0.878342391034642,0.628340120440365,7.15279754584056,3.95389910869537,2.39961092397363,3.55796635804581,0.449371918214468,0,0.125654352112864,0.173824320192276,0.255715457330331,0.41557608911912,0.162241263067758,3.46253837091075,3.6078021476927,5.05445516867349,4.20883711772948,0.650602214813519,0.689706313300419,0.720248519221397,1.35634336052144,1.49680298132921,1.0249097622788,0.937017245597288,1.03481348295606,3.88022387279116,2.64748512234947,3.51902248327898,3.72632745126877,3.05851974148158,5.92028683087683,1.23469281844766,1.19420560091096,5.61770549850588,3.08817488537658,3.40996199274711,2.07125772535502,2.11073453982987,2.16074473753218,2.84093682702252,0.787056926989615,1.85120535464854,1.86027155800326,0.268273401399619,2.10177616260905,1.6455984991348,2.13417703302824,2.35099547682982,1.46199987425332,2.41505126820156,2.28150911892632,0.210289948564127,0.823236899034275,3.30418782983798,5.02456076660734,1.06644125267617,2.78684006232526,3.09281907173024,4.43703754171354,5.33707305227689,8.3699275489526,5.69434873853414,11.5289268306808,11.0587491872119,14.1259095149217,13.2575579241002,8.98819408654222,6.70027954611552,7.36822711041159,3.79335801906163,2.62771579002376,1.1270773567308,1.01825663922657,2.13347735884388,3.99774173374816,2.78240763346732,3.69025369949005,2.04098346193787,2.34454611451421,4.15033677922008,2.8363667971736,3.93117990226406,3.14806957338795,4.86864291332407,4.82354319504834,2.80088436959562,6.32931502391783,5.18832725680113,7.96228098245436,4.31304619582064,9.67566463938109,6.86482880852033,11.1134706296729,8.7904732625737,5.30687873499704,3.51031061316549,2.08440552947533,1.95557971730431,2.03694102930226,2.81628297946203,3.68513766371995,4.99891645860629,4.48807390072937,4.57141917907954,4.87222317227305,3.50800491046472,3.11340297959902,4.31712454664739,4.77341893318988,4.52373851817817,4.35124547054968,4.91764273019036,3.31124095565679,0.160550589987792,0.468846746368813,7.37707254195039,1.51482556322624,1.57754109708128,1.17131623288992,1.29254038639679,2.15071918157297,1.55959071857676,1.69845918473299,1.21443210502468,0.876767573733936,1.97643888973262,0.321321316421807,2.41298144854057,2.49291845134157,5.70104357737516,4.12425307431339,1.32745138339963,1.69946445308487,3.02323556964751,3.58349651536206,4.42952839321159,3.68922177532713,6.97756391554197,2.90826983582004,2.85197902707777,4.10847785316561,4.21674434299995,3.09406629744561,2.7235168460303,1.26042765821917,1.4229455216103,1.92903331528433,1.06404140185364,1.60531935841864,2.13913726782757,3.65357938937519,6.57080782578389,2.96564899209348,7.71849393192367,2.4732937941222,3.06782410722221,4.644095219468,4.65552141612232,5.9090723908222,9.91034844541493,0.927126510052548,2.56306321196779,3.50857675537478,3.70389054739423,2.44878994106098,2.32380187125743,2.28778173206523,6.11922347977879,5.59805809294632,6.21899882119907,5.72802370809068,1.58167996790568,4.06638934253697,2.70013352054503,2.09088296014469,3.05707589244649,5.52943820177765,7.52146447100557,3.40282724579238,7.12882353104861,1.86401793926078,1.12738587736838,2.69129782879162,2.48187735685646,2.13896307178452,1.6790777052105,1.18269287843545,3.28600268208111,2.8644964665669,1.99232754408851,0.483168241652012,0.864090018773596,1.26404448251271,1.41907650703115,2.46506297195585,0.649604114888975,1.25318686967237,1.98681354781265,1.20195449519969,1.32920574457119,1.21159739937777,0.990688486514998,1.61321896218945,0.779663045918019,1.44317762460494,0.818138315270983,2.0405734525369,1.77588762699252,3.22969883794113,3.02192309455341,4.25017106870819,6.00583921443782,3.84618410961257,2.57242054894879,7.52358156053045,0.564751842617067,0,0,0.171853182343688,0.685082519770642,0.755393897389701,0,0,0.453142408984205,0,0.726511433089237,2.39414924040619,2.56100408631201,2.91728060481953,1.04806581313991,2.75765262675021,1.55572709461131,2.26638562962784,1.92551525755089,1.01078884705519,2.5347929989024,2.07488975524684,3.27745276144588,2.94515701062399,2.69946704091382,2.38146845641537,3.01299247456624,2.70072908649187,3.29668720642645,1.91358596174717,2.40008476669791,2.66213709239006,2.14592570952589,2.18019624948493,2.54095327121393,2.70766745253365,2.56099162021882,1.8414879800649,2.8518863907631,1.12228454331548,2.49133538060766,3.44765688314472,3.6830793885272,3.40861050609125,2.70069255373598,2.24829520144151,3.27504251823572,4.94203424311086,6.50380329034067,3.08827986767322,3.47801753430632
|short_description=p3@Shc1
}}

Latest revision as of 20:39, 25 September 2015

Short description:p3@Shc1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Shc1_5end
Coexpression cluster:MCL_coexpression_mm9:3428
Association with transcript: 18bp_to_ENSMUST00000107417_5end
EntrezGene:Shc1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Shc1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.28
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I515.01
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I69.10
CD326+ enterocyte, pool1.CNhs13542.11848-124I36.65
CD326+ enterocyte, pool2.CNhs13197.11849-124I410.02
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I76.38
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I87.01
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.94
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E73.38
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F24.21
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E62.57
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.99
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E42.23
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E82.10
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A13.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.82
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A54.20
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A22.05
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.10
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.02
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H22.98
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.04
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D15.76
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D25.51
GP2+ M cell, pool1.CNhs13228.11845-124H912.06
GP2+ M cell, pool2.CNhs13231.11846-124I19.48
GP2+ M cell, pool3.CNhs13240.11847-124I29.05
Ileum epithelium, pool1.CNhs13199.10252-104B911.97
Ileum epithelium, pool2.CNhs13232.10253-104C17.06
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C88.87
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G62.46
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F53.18
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F63.99
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F74.29
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G814.65
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H14.69
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H35.24
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G99.41
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H25.46
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H411.17
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D89.06
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D98.41
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B35.69
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B711.74
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.31
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.64
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.53
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.94
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A22.52
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I95.08
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A13.70
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C16.69
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E14.30
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C56.19
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C67.79
Mouse Meningeal cells, donor3.CNhs12109.11639-122D14.45
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C77.20
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E72.97
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.84
Mouse Microglia, donor1.CNhs12629.11718-123C82.40
Mouse Microglia, donor2.CNhs12634.11736-123E83.46
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.31
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.88
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.26
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.31
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.18
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.46
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D94.09
Mouse Schwann, donor2.CNhs12573.11746-123F92.34
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G312.17
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C411.56
Mouse hepatocyte, donor3.CNhs12615.11637-122C87.56
Mouse hepatocyte, donor6.CNhs13090.11822-124F45.85
Mouse hepatocyte, donor8.CNhs13091.11824-124F65.82
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.53
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I78.01
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E37.01
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I85.30
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.27
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H15.13
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B621.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G14.55
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G24.31
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G35.56
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.31
accessory axillary lymph node, adult.CNhs10475.1063-29H91.81
adrenal gland, adult.CNhs10508.49-24D73.56
adrenal gland, embryo E14.CNhs11038.406-44C51.73
adrenal gland, embryo E16.CNhs11004.1254-43D61.83
adrenal gland, embryo E17.CNhs11043.1263-45I12.54
adrenal gland, embryo E18.CNhs11026.1262-18F53.32
adrenal gland, neonate N00.CNhs11191.1311-23C14.47
adrenal gland, neonate N25.CNhs11223.1377-27I33.77
amnion, adult pregnant day17.5.CNhs10488.583-22A85.69
aorta, adult.CNhs10498.46-23H16.80
bone (os femoris), adult.CNhs10483.56-12G22.65
bone (os femoris), neonate N02.CNhs11227.1985-43F55.18
bone (os femoris), neonate N16.CNhs11225.1525-43A63.31
bone (os femoris), neonate N20.CNhs11195.1350-25C33.39
cecum, adult.CNhs10467.37-13H411.18
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I20.63
colon, adult.CNhs10468.36-18H77.15
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C73.95
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D12.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D43.56
corpora quadrigemina, adult.CNhs10501.16-22A40.45
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.42
diencephalon, neonate N30.CNhs11201.1388-42B20.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.46
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.61
epididymis, adult.CNhs10490.58-23B25.05
eyeball, adult.CNhs10484.31-12G44.21
eyeball, embryo E12.CNhs11016.345-16C60.65
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D41.36
eyeball, neonate N00.CNhs11207.633-15C61.50
eyeball, neonate N01.CNhs11140.1532-43E71.02
eyeball, neonate N02.CNhs11205.1551-44G80.94
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E23.88
forelimb, embryo E12.CNhs10600.359-14H22.65
forelimb, embryo E13.CNhs10589.384-1E23.52
forelimb, embryo E14.CNhs10577.413-26A83.73
forelimb, embryo E15.CNhs11007.437-20E73.06
forelimb, embryo E17.CNhs10598.1517-43C45.92
forelimb, embryo E18.CNhs11008.1520-43B51.23
gonad, embryo E13.CNhs11044.1564-45I61.19
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C85.62
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D23.09
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D53.41
heart, embryo E11.CNhs10586.331-24E92.07
heart, embryo E12.CNhs11015.353-12F52.11
heart, embryo E13.CNhs11013.376-3I92.16
heart, embryo E14.CNhs10597.403-26D42.84
heart, embryo E15.CNhs11017.431-16C80.79
heart, embryo E16.CNhs11021.457-17C61.85
heart, embryo E17.CNhs11025.479-18E51.86
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E32.10
heart, neonate N03.CNhs11221.1349-25I21.65
heart, neonate N10.CNhs11118.749-24G12.13
heart, neonate N16.CNhs11209.782-15G12.35
heart, neonate N20.CNhs11127.821-26I61.46
heart, neonate N25.CNhs11196.1351-25D32.42
heart, neonate N30.CNhs11202.1390-42D22.28
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.82
intestinal mucosa, adult.CNhs10506.860-29I33.30
intestine, adult.CNhs10496.178-9A35.02
intestine, embryo E12.CNhs11019.1251-16I51.07
intestine, embryo E13.CNhs11010.381-16D52.79
intestine, embryo E15.CNhs10602.976-16D83.09
intestine, embryo E16.CNhs10585.463-22H44.44
intestine, embryo E17.CNhs10582.482-18D35.34
intestine, embryo E18.CNhs10526.1289-20F78.37
intestine, neonate N00.CNhs11126.644-26D15.69
intestine, neonate N01.CNhs11192.1322-23E911.53
intestine, neonate N06.CNhs11102.688-20B811.06
intestine, neonate N07.CNhs11095.720-20F214.13
intestine, neonate N10.CNhs11098.755-23A513.26
intestine, neonate N20.CNhs11187.827-18D18.99
intestine, neonate N25.CNhs11121.1352-25E36.70
intestine, neonate N30.CNhs11131.1384-42G17.37
kidney, embryo E14.CNhs10606.411-4I93.79
kidney, embryo E15.CNhs10997.434-16F82.63
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.02
kidney, embryo E18.CNhs11001.1288-20C72.13
kidney, neonate N00.CNhs11214.646-21G74.00
kidney, neonate N10.CNhs11206.758-6D52.78
kidney, neonate N20.CNhs11113.832-19I13.69
kidney, neonate N25.CNhs11122.1353-25F32.04
kidney, neonate N30.CNhs11203.1385-42H12.34
liver, adult pregnant day01.CNhs10466.508-5B24.15
liver, embryo E12.CNhs10601.355-15F82.84
liver, embryo E13.CNhs10524.378-3H63.93
liver, embryo E14.CNhs10594.409-16E13.15
liver, embryo E15.CNhs10520.433-16D74.87
liver, embryo E16.CNhs10523.462-17F54.82
liver, embryo E17.CNhs10510.481-18A32.80
liver, embryo E18.CNhs10579.499-43G46.33
liver, neonate N00.CNhs11117.641-24F45.19
liver, neonate N03.CNhs11123.1345-25G27.96
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H29.68
liver, neonate N10.CNhs11115.751-24B96.86
liver, neonate N20.CNhs11220.823-25A311.11
liver, neonate N25.CNhs11198.1368-26H18.79
liver, neonate N30.CNhs11106.1382-42D15.31
lung, adult.CNhs10474.28-22B13.51
lung, embryo E12.CNhs10522.354-16G22.08
lung, embryo E14.CNhs10604.404-26F81.96
lung, embryo E15.CNhs11020.432-17C52.04
lung, embryo E16.CNhs10998.458-17B62.82
lung, embryo E17.CNhs10605.480-44A63.69
lung, embryo E18.CNhs10583.1287-20I65.00
lung, neonate N00.CNhs11224.640-42C64.49
lung, neonate N06.CNhs11212.683-20E54.57
lung, neonate N07.CNhs11111.715-19A34.87
lung, neonate N10.CNhs11219.750-23E63.51
lung, neonate N20.CNhs11109.822-18A43.11
lung, neonate N25.CNhs11119.1359-25C74.32
lung, neonate N30.CNhs11133.1394-42H24.77
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A14.52
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A14.35
mammary gland, adult lactating day02.CNhs10480.595-22B64.92
mammary gland, adult pregnant day19.CNhs10476.588-5H23.31
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.47
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C77.38
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.51
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.58
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.29
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.15
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.56
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.70
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.98
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I72.41
ovary, embryo E18.CNhs11040.505-44H72.49
ovary, neonate N00.CNhs11217.1299-22I45.70
oviduct, adult pregnant day01.CNhs10500.988-6G64.12
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F41.70
pancreas, embryo E15.CNhs11042.1556-45F23.02
pancreas, embryo E16.CNhs11003.460-26E53.58
pancreas, embryo E17.CNhs10599.1558-45G34.43
pancreas, embryo E18.CNhs10580.1535-43I73.69
pancreas, neonate N00.CNhs11105.645-26G96.98
pancreas, neonate N01.CNhs11138.1531-43D72.91
pancreas, neonate N02.CNhs11139.1539-43D82.85
pancreas, neonate N16.CNhs11136.787-43B64.11
pancreas, neonate N25.CNhs11094.1555-45E24.22
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G82.72
pituitary gland, embryo E12.CNhs11018.346-16E61.26
pituitary gland, embryo E13.CNhs11009.370-44C71.42
pituitary gland, embryo E14.CNhs11037.398-44A51.93
pituitary gland, embryo E15.CNhs10592.427-16B91.06
pituitary gland, embryo E16.CNhs11036.449-43F61.61
pituitary gland, embryo E17.CNhs11039.1265-44F52.14
pituitary gland, neonate N00.CNhs11190.1308-22E93.65
placenta, adult pregnant day10.CNhs10472.539-13I76.57
placenta, adult pregnant day17.CNhs10464.577-18G32.97
prostate, adult.CNhs10470.859-1F87.72
skin, adult.CNhs10492.30-1C32.47
skin, neonate N00.CNhs11124.650-25G43.07
skin, neonate N03.CNhs11215.662-22H34.64
skin, neonate N06.CNhs11097.693-20I54.66
skin, neonate N10.CNhs11108.762-6C45.91
small intestine, neonate N16.CNhs11114.790-21I19.91
spinal cord, adult.CNhs10505.24-13C90.93
spleen, adult.CNhs10465.25-2G22.56
spleen, embryo E16.CNhs11035.461-43C13.51
spleen, embryo E18.CNhs11011.1271-21F23.70
spleen, neonate N10.CNhs11116.752-24D12.45
spleen, neonate N20.CNhs11112.824-19H12.32
spleen, neonate N25.CNhs11099.1354-25G32.29
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C66.12
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C95.60
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D36.22
stomach, adult.CNhs10503.33-1H65.73
stomach, embryo E12.CNhs10588.356-43E31.58
stomach, embryo E15.CNhs10603.1252-16G84.07
stomach, embryo E16.CNhs11022.459-17D42.70
stomach, embryo E17.CNhs11006.1035-18D52.09
stomach, embryo E18.CNhs10999.1286-20C63.06
stomach, neonate N03.CNhs11193.1340-24B85.53
stomach, neonate N07.CNhs11210.718-18A97.52
stomach, neonate N25.CNhs11104.1355-25E43.40
stomach, neonate N30.CNhs11134.1386-42I17.13
submandibular gland, adult.CNhs10469.59-29C11.86
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F52.69
testis, embryo E15.CNhs11034.443-27C52.48
testis, embryo E16.CNhs11033.470-26G52.14
testis, embryo E17.CNhs11029.486-18I51.68
testis, embryo E18.CNhs11027.503-18G51.18
testis, neonate N00.CNhs11189.1300-22B73.29
testis, neonate N07.CNhs11222.726-26I42.86
testis, neonate N10.CNhs11204.763-44D91.99
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B51.26
thymus, embryo E14.CNhs11041.402-44I41.42
thymus, embryo E15.CNhs11005.430-45I22.47
thymus, embryo E16.CNhs11002.456-26C50.65
thymus, embryo E17.CNhs10581.478-18C11.25
thymus, embryo E18.CNhs10595.1273-19G41.99
thymus, neonate N02.CNhs11181.1541-43F81.20
thymus, neonate N03.CNhs11137.2104-43C71.33
thymus, neonate N06.CNhs11197.681-26C41.21
thymus, neonate N07.CNhs11211.713-19D30.99
thymus, neonate N10.CNhs11194.748-24E41.61
thymus, neonate N20.CNhs11186.820-7A20.78
thymus, neonate N25.CNhs11125.1362-25G71.44
thymus, neonate N30.CNhs11132.1393-42G20.82
tongue, adult.CNhs10499.32-1B42.04
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.78
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F73.23
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G53.02
urinary bladder, adult.CNhs10481.879-12E44.25
uterus, adult pregnant day19.CNhs10497.590-15F56.01
uterus, adult.CNhs10509.92-27E53.85
vagina, adult.CNhs10502.89-27D52.57
vesicular gland, adult.CNhs10491.51-27F87.52
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.73
whole body, embryo E12.CNhs10587.857-27C92.39
whole body, embryo E13.CNhs10512.372-23H22.56
whole body, embryo E14.5.CNhs10578.420-27D22.92
whole body, embryo E14.CNhs10519.395-14B11.05
whole body, embryo E16.CNhs10514.453-14F22.76
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.95
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.70
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.01
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.70
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.66
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.15
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.18
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.54
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.71
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.56
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.85
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.49
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.45
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.41
whole body, embryo E17.5.CNhs10513.490-9F92.70
whole body, embryo E17.CNhs10517.475-3I52.25
whole body, embryo E18.CNhs10516.493-3B33.28
whole body, neonate N00.CNhs10525.657-19C24.94
whole body, neonate N01.CNhs10576.659-23C66.50
whole body, neonate N06.CNhs10515.692-21D13.09
whole body, neonate N10.CNhs10518.761-6B43.48





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
epithelial cell9.86e-0925
endodermal cell1.28e-0820

Uber anatomy
Ontology termp-valuen
endoderm-derived structure4.11e-13118
endoderm4.11e-13118
presumptive endoderm4.11e-13118
digestive system1.01e-12116
digestive tract1.01e-12116
primitive gut1.01e-12116
subdivision of digestive tract4.75e-12114
intestine1.21e-1131
gastrointestinal system1.18e-1047
trunk mesenchyme2.34e-1045
trunk1.16e-0990
mesenchyme9.09e-0861
entire embryonic mesenchyme9.09e-0861
digestive tract diverticulum2.47e-0723
sac2.47e-0723
liver8.90e-0722
epithelial sac8.90e-0722
digestive gland8.90e-0722
epithelium of foregut-midgut junction8.90e-0722
anatomical boundary8.90e-0722
hepatobiliary system8.90e-0722
foregut-midgut junction8.90e-0722
hepatic diverticulum8.90e-0722
liver primordium8.90e-0722
septum transversum8.90e-0722
liver bud8.90e-0722
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