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FFCP PHASE1:Mm9::chr19:46150332..46150349,+: Difference between revisions

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{{FFCP|EntrezGene=70769|HGNC=|UniProt=E9Q5C9,Q8CE21,Q3UI16,Q3TKZ9|association_with_transcript=-3bp_to_ENSMUST00000165017,NM_001039351,NM_001039352,NM_001039353,NM_053086,uc008hsg.1,uc008hsh.1,uc008hsi.1,uc008hsj.1_5end|description=CAGE_peak_5_at_Nolc1_5end|id=chr19:46150332..46150349,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000349,5.26e-08,3;CL:0000351,5.26e-08,3;CL:0000893,7.50e-08,6;CL:0002489,7.50e-08,6;CL:0000898,7.50e-08,6;CL:0000809,7.50e-08,6;CL:0000810,7.50e-08,6;CL:0000895,7.50e-08,6;CL:0000808,7.50e-08,6;CL:0000894,7.50e-08,6;CL:0000806,7.50e-08,6;CL:0000807,7.50e-08,6;CL:0000805,7.50e-08,6;CL:0002425,7.50e-08,6;CL:0002436,7.50e-08,6;CL:0002427,7.50e-08,6;CL:0002428,7.50e-08,6;CL:0002429,7.50e-08,6;CL:0002433,7.50e-08,6;CL:0002431,7.50e-08,6;CL:0002432,7.50e-08,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0000358,5.26e-08,3;UBERON:0000307,5.26e-08,3;UBERON:0007010,5.26e-08,3|phase1_expression=0.80074423552397,0.348975407639361,0.454999239389536,0,0.500895729946347,1.00727563147134,0.467225281191051,0,1.54867594366833,1.17032263160997,1.02730780935303,0.638177271962691,0.171200729931206,0.0874204024189974,0.999329285446988,0.809901069559304,0.699561878128147,0.315462165358238,0.137114433605739,0,1.36069264241712,0.595745707205312,0.261199789138935,0.159992422793407,0.68822784320151,0.57423196411502,0.430761996159075,0.215471232685889,0,0,0.221730510655305,1.27006134691926,0.61506478758457,0,0.288851619751275,0.664938581433969,0.612508068787107,0,0,0,0.588231488031014,0.683045484958446,0.485510353031154,0.755380907853464,0.709638518536602,0.550640256485045,0,0,0,0.194429899074283,0.279972843250725,0,0.167782606057736,0,0,0.514518872071894,0,0,0,0.528990979272033,0.633831403506179,0,0,0,0,0,0.299600110518405,0,0.622137673850866,0.810035629990144,1.05162480675691,0,0,0.857435594504678,0.479227355091182,0,0,0.638436690425939,0.307213066512487,0.395658863190582,0.0914876436024097,0.52091337055676,0,0,0.30559649555362,0,0.427115042397309,0,0.530083353332288,0.226714680320357,0,0,0,0,0,0,0,0.681721290312231,0.519572009205738,0,0.845060518660083,0,0,0,0.649473123033642,0.253359865475099,1.51657333504435,0.5709193985953,0.258937883647172,0.148442139064825,0.173485326766136,0,0.230615497256059,0,0,0.251333182659351,0,0.144599356919912,0,0.647067399789637,0.220841518460394,0.484875253135222,0,0.292780797011547,0.209446706813455,0,0.479260498023681,0.599902730993408,0.762421362438388,0,0,0.376963056338593,0.173824320192276,0,0,0,0.407357455401265,0,0.252722758433675,0.420883711772948,0.260240885925407,1.37941262660084,0.540186389416048,0.90422890701429,1.02054748726992,1.2811372028485,0.937017245597288,0,0.862271971731369,0.567318240503458,0.175951124163949,0.657587197282725,0,0.696504333044333,0.205782136407943,0.398068533636986,0,0.51469581422943,0.568326998791185,0.414251545071004,0,0.180062061461015,0.23674473558521,0.196764231747404,0.308534225774757,0.232533944750408,0,0,0.16455984991348,0.492502392237286,0.324275238183423,0,0,0.134206418760372,0.420579897128254,0.514523061896422,0,0.528901133327089,0.853153002140936,0,0.38660238396628,0.605050573870028,0.22237804384487,0.190225626112559,0.474529061544512,0.329397909448022,0,0,0.38992817423824,0.898819408654221,0,0,0,0.685491075658373,0,0.407302655690628,0.581857461502877,0.140271639780637,0.569128834118316,0.590440591918409,0.31399745568275,0.123397163921801,0,2.16898637430922,2.55526693647164,0.674586337154561,0.608580364165509,0.72353147925725,0.763877555344259,0,0.486405680325106,0.823684239564244,0,0.744281895337007,0,0.505157755894224,0.358794827043824,0.482443521363367,0,0.189491411770485,0.651859905768103,0.169745085775188,0.234690248288502,0.670025029767263,0.476087281772027,0.195133647857799,0.157635144106191,0,0.637819074629948,0,0.345369963731791,0,0,0.54390568381871,0.491764273019036,0.551873492609465,0.321101179975584,0.468846746368813,1.3114795630134,0,0.315508219416257,0,0.430846795465598,0.238968797952552,0,0.283076530788832,0,0.292255857911312,0,0.321321316421807,0.283880170416537,0.35613120733451,0.488660878060728,0.164970122972535,0,0.485561272309963,0,0.565815239267694,0.295301892880773,0.614870295887855,0,0.363533729477506,1.78248689192361,0.632073515871632,0,0,0.340439605753788,0.540183282093931,0.517434735131018,0.214337035031592,0.709360934569094,0.535106452806212,0.329098041204242,0.913394847343798,0.938686832254841,0.21183207086382,0,0.49465875882444,0,0.844380948994182,0.358117032009409,0.656563598980245,0,0.556275906031529,0.683483523191411,0.206386867963223,0.925972636848558,0.941842285023455,0.546776910884101,0.457556346413045,0.339956859987711,0.419854356970974,0.414599921413271,0,0.474503990371703,0.406638934253697,0.216010681643603,0,0,0.269728692769641,0.165306911450672,0,0,0,0,0.299033092087958,0.330916980914195,0.972255941720238,0.387479470433193,0.506868376472335,0.117357238645754,0.781226309063701,0.524296722128554,0.241584120826006,0,0,0.810900861160657,1.1298205288131,0.77952493786677,0.179026695667481,0.596044064343795,0.120195449519969,0.295379054349154,0.605798699688886,0.15241361331,0,0.194915761479505,0.288635524920988,0,0.680191150845634,1.99787358036658,2.9605572681127,0.839423081820392,0,0,0,0.643105137237198,0,0,0,0,0.515559547031063,0,0,0.675022500231806,0,0,0,0.518936737920883,0.399024873401031,0.170733605754134,0.243106717068294,0.628839487883947,0,0.666740183404846,0.412070114477788,0.320919209591815,0.252697211763798,0.50695859978048,0.377252682772152,0.468207537349412,0.192075457214608,0.287177344778066,0,0.347652977834566,0.192909220463705,0.824171801606613,0.441596760403192,0.342869252385415,0.532427418478012,0.238436189947321,0.290692833264657,0,0.338458431566706,0.365855945745545,0,0.679020569229309,0.561142271657738,0.355905054372522,0.394017929502254,0.409231043169689,0.464810523557898,0.192906610981141,0.749431733813838,0,0,0.191288332068843,0.220591419119515,0.231867835620421|short_description=p5@Nolc1}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=70769
|HGNC=
|TSSclassifier=NA
|UniProt=E9Q5C9,Q8CE21,Q3UI16,Q3TKZ9
|association_with_transcript=-3bp_to_ENSMUST00000165017,NM_001039351,NM_001039352,NM_001039353,NM_053086,uc008hsg.1,uc008hsh.1,uc008hsi.1,uc008hsj.1_5end
|cluster_id=chr19:46150332..46150349,+
|description=CAGE_peak_5_at_Nolc1_5end
|id=chr19:46150332..46150349,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000349,5.26e-08,3;CL:0000351,5.26e-08,3;CL:0000893,7.50e-08,6;CL:0002489,7.50e-08,6;CL:0000898,7.50e-08,6;CL:0000809,7.50e-08,6;CL:0000810,7.50e-08,6;CL:0000895,7.50e-08,6;CL:0000808,7.50e-08,6;CL:0000894,7.50e-08,6;CL:0000806,7.50e-08,6;CL:0000807,7.50e-08,6;CL:0000805,7.50e-08,6;CL:0002425,7.50e-08,6;CL:0002436,7.50e-08,6;CL:0002427,7.50e-08,6;CL:0002428,7.50e-08,6;CL:0002429,7.50e-08,6;CL:0002433,7.50e-08,6;CL:0002431,7.50e-08,6;CL:0002432,7.50e-08,6
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=
|ontology_enrichment_uberon_v019_2=UBERON:0000358,5.26e-08,3;UBERON:0000307,5.26e-08,3;UBERON:0007010,5.26e-08,3
|phase1_expression=0.80074423552397,0.348975407639361,0.454999239389536,0,0.500895729946347,1.00727563147134,0.467225281191051,0,1.54867594366833,1.17032263160997,1.02730780935303,0.638177271962691,0.171200729931206,0.0874204024189974,0.999329285446988,0.809901069559304,0.699561878128147,0.315462165358238,0.137114433605739,0,1.36069264241712,0.595745707205312,0.261199789138935,0.159992422793407,0.68822784320151,0.57423196411502,0.430761996159075,0.215471232685889,0,0,0.221730510655305,1.27006134691926,0.61506478758457,0,0.288851619751275,0.664938581433969,0.612508068787107,0,0,0,0.588231488031014,0.683045484958446,0.485510353031154,0.755380907853464,0.709638518536602,0.550640256485045,0,0,0,0.194429899074283,0.279972843250725,0,0.167782606057736,0,0,0.514518872071894,0,0,0,0.528990979272033,0.633831403506179,0,0,0,0,0,0.299600110518405,0,0.622137673850866,0.810035629990144,1.05162480675691,0,0,0.857435594504678,0.479227355091182,0,0,0.638436690425939,0.307213066512487,0.395658863190582,0.0914876436024097,0.52091337055676,0,0,0.30559649555362,0,0.427115042397309,0,0.530083353332288,0.226714680320357,0,0,0,0,0,0,0,0.681721290312231,0.519572009205738,0,0.845060518660083,0,0,0,0.649473123033642,0.253359865475099,1.51657333504435,0.5709193985953,0.258937883647172,0.148442139064825,0.173485326766136,0,0.230615497256059,0,0,0.251333182659351,0,0.144599356919912,0,0.647067399789637,0.220841518460394,0.484875253135222,0,0.292780797011547,0.209446706813455,0,0.479260498023681,0.599902730993408,0.762421362438388,0,0,0.376963056338593,0.173824320192276,0,0,0,0.407357455401265,0,0.252722758433675,0.420883711772948,0.260240885925407,1.37941262660084,0.540186389416048,0.90422890701429,1.02054748726992,1.2811372028485,0.937017245597288,0,0.862271971731369,0.567318240503458,0.175951124163949,0.657587197282725,0,0.696504333044333,0.205782136407943,0.398068533636986,0,0.51469581422943,0.568326998791185,0.414251545071004,0,0.180062061461015,0.23674473558521,0.196764231747404,0.308534225774757,0.232533944750408,0,0,0.16455984991348,0.492502392237286,0.324275238183423,0,0,0.134206418760372,0.420579897128254,0.514523061896422,0,0.528901133327089,0.853153002140936,0,0.38660238396628,0.605050573870028,0.22237804384487,0.190225626112559,0.474529061544512,0.329397909448022,0,0,0.38992817423824,0.898819408654221,0,0,0,0.685491075658373,0,0.407302655690628,0.581857461502877,0.140271639780637,0.569128834118316,0.590440591918409,0.31399745568275,0.123397163921801,0,2.16898637430922,2.55526693647164,0.674586337154561,0.608580364165509,0.72353147925725,0.763877555344259,0,0.486405680325106,0.823684239564244,0,0.744281895337007,0,0.505157755894224,0.358794827043824,0.482443521363367,0,0.189491411770485,0.651859905768103,0.169745085775188,0.234690248288502,0.670025029767263,0.476087281772027,0.195133647857799,0.157635144106191,0,0.637819074629948,0,0.345369963731791,0,0,0.54390568381871,0.491764273019036,0.551873492609465,0.321101179975584,0.468846746368813,1.3114795630134,0,0.315508219416257,0,0.430846795465598,0.238968797952552,0,0.283076530788832,0,0.292255857911312,0,0.321321316421807,0.283880170416537,0.35613120733451,0.488660878060728,0.164970122972535,0,0.485561272309963,0,0.565815239267694,0.295301892880773,0.614870295887855,0,0.363533729477506,1.78248689192361,0.632073515871632,0,0,0.340439605753788,0.540183282093931,0.517434735131018,0.214337035031592,0.709360934569094,0.535106452806212,0.329098041204242,0.913394847343798,0.938686832254841,0.21183207086382,0,0.49465875882444,0,0.844380948994182,0.358117032009409,0.656563598980245,0,0.556275906031529,0.683483523191411,0.206386867963223,0.925972636848558,0.941842285023455,0.546776910884101,0.457556346413045,0.339956859987711,0.419854356970974,0.414599921413271,0,0.474503990371703,0.406638934253697,0.216010681643603,0,0,0.269728692769641,0.165306911450672,0,0,0,0,0.299033092087958,0.330916980914195,0.972255941720238,0.387479470433193,0.506868376472335,0.117357238645754,0.781226309063701,0.524296722128554,0.241584120826006,0,0,0.810900861160657,1.1298205288131,0.77952493786677,0.179026695667481,0.596044064343795,0.120195449519969,0.295379054349154,0.605798699688886,0.15241361331,0,0.194915761479505,0.288635524920988,0,0.680191150845634,1.99787358036658,2.9605572681127,0.839423081820392,0,0,0,0.643105137237198,0,0,0,0,0.515559547031063,0,0,0.675022500231806,0,0,0,0.518936737920883,0.399024873401031,0.170733605754134,0.243106717068294,0.628839487883947,0,0.666740183404846,0.412070114477788,0.320919209591815,0.252697211763798,0.50695859978048,0.377252682772152,0.468207537349412,0.192075457214608,0.287177344778066,0,0.347652977834566,0.192909220463705,0.824171801606613,0.441596760403192,0.342869252385415,0.532427418478012,0.238436189947321,0.290692833264657,0,0.338458431566706,0.365855945745545,0,0.679020569229309,0.561142271657738,0.355905054372522,0.394017929502254,0.409231043169689,0.464810523557898,0.192906610981141,0.749431733813838,0,0,0.191288332068843,0.220591419119515,0.231867835620421
|short_description=p5@Nolc1
}}

Latest revision as of 20:54, 25 September 2015

Short description:p5@Nolc1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Nolc1_5end
Coexpression cluster:NA
Association with transcript: -3bp_to_ENSMUST00000165017, NM_001039351, NM_001039352, NM_001039353, NM_053086, uc008hsg.1, uc008hsh.1, uc008hsi.1, uc008hsj.1_5end
EntrezGene:Nolc1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Nolc1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.55
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.03
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.64
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.81
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.36
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.69
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.61
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.76
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.71
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.55
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.62
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.81
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.05
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.86
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.48
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.64
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.31
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.40
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.31
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.43
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.53
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.68
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.85
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.65
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.52
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.57
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.48
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.76
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.38
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E21.38
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D40.90
eyeball, neonate N00.CNhs11207.633-15C61.02
eyeball, neonate N01.CNhs11140.1532-43E71.28
eyeball, neonate N02.CNhs11205.1551-44G80.94
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.86
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.51
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E80.42
hippocampus, neonate N00.CNhs11228.627-43G10.51
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.69
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.57
kidney, neonate N20.CNhs11113.832-19I10.59
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F82.17
liver, embryo E13.CNhs10524.378-3H62.56
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D70.61
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A30.76
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.49
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.64
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C20.32
medulla oblongata, neonate N30.CNhs11200.1396-42A30.47
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.31
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D81.78
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.52
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.94
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.84
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.66
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.56
spleen, adult.CNhs10465.25-2G20.68
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.93
spleen, neonate N10.CNhs11116.752-24D10.94
spleen, neonate N20.CNhs11112.824-19H10.55
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.42
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.41
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.97
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.78
testis, neonate N10.CNhs11204.763-44D90.52
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.81
thymus, embryo E15.CNhs11005.430-45I21.13
thymus, embryo E16.CNhs11002.456-26C50.78
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.61
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.29
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.96
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.84
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.52
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.52
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
extraembryonic cell5.26e-083
trophoblast cell5.26e-083
thymocyte7.50e-086
double negative thymocyte7.50e-086
naive T cell7.50e-086
double-positive, alpha-beta thymocyte7.50e-086
CD4-positive, alpha-beta thymocyte7.50e-086
naive thymus-derived CD4-positive, alpha-beta T cell7.50e-086
DN4 thymocyte7.50e-086
DN1 thymic pro-T cell7.50e-086
DN2 thymocyte7.50e-086
DN3 thymocyte7.50e-086
immature single positive thymocyte7.50e-086
early T lineage precursor7.50e-086
mature CD4 single-positive thymocyte7.50e-086
resting double-positive thymocyte7.50e-086
double-positive blast7.50e-086
CD69-positive double-positive thymocyte7.50e-086
CD69-positive, CD4-positive single-positive thymocyte7.50e-086
CD4-positive, CD8-intermediate double-positive thymocyte7.50e-086
CD24-positive, CD4 single-positive thymocyte7.50e-086

Uber anatomy
Ontology termp-valuen
blastocyst5.26e-083
blastula5.26e-083
cleaving embryo5.26e-083
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