FFCP PHASE1:Mm9::chr5:33560809..33560871,-: Difference between revisions
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{{FFCP|EntrezGene=100689|HGNC=|MCL_coexpression_id=214|UniProt=Q8BMS2|association_with_transcript=15bp_to_ENSMUST00000046186,NM_133903,uc008xai.2_5end|description=CAGE_peak_1_at_Spon2_5end|id=chr5:33560809..33560871,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004872!3.56e-10!33;UBERON:0004535!1.00e-09!23;UBERON:0001009!1.00e-09!23;UBERON:0001048!1.48e-09!147;UBERON:0007100!1.79e-09!18;UBERON:0000948!1.79e-09!18;UBERON:0005498!1.79e-09!18;UBERON:0004140!1.79e-09!18;UBERON:0009881!1.79e-09!18;UBERON:0004141!1.79e-09!18;UBERON:0003084!1.79e-09!18;UBERON:0007005!1.79e-09!18;UBERON:0004139!1.79e-09!18;UBERON:0004291!1.79e-09!18;UBERON:0003914!6.27e-09!47;UBERON:0000926!7.31e-08!193;UBERON:0004120!7.31e-08!193;UBERON:0006603!7.31e-08!193|ontology_enrichment_uberon_v019_2=UBERON:0004872,2.07e-10,33;UBERON:0004535,6.01e-10,23;UBERON:0001009,6.01e-10,23;UBERON:0007100,1.09e-09,18;UBERON:0000948,1.09e-09,18;UBERON:0005498,1.09e-09,18;UBERON:0004140,1.09e-09,18;UBERON:0009881,1.09e-09,18;UBERON:0004141,1.09e-09,18;UBERON:0003084,1.09e-09,18;UBERON:0007005,1.09e-09,18;UBERON:0004139,1.09e-09,18;UBERON:0004291,1.09e-09,18;UBERON:0003914,7.22e-09,47;UBERON:0001048,1.34e-08,134|phase1_expression=23.7020293715095,0,0,0,0,0.503637815735669,0.700837921786577,0,0,0,0,0,0,0,1.99865857089398,2.02475267389826,2.09868563438444,0,0.411343300817216,0,6.63337663178344,0.198581902401771,0.261199789138935,0.639969691173627,0.68822784320151,0,0,0.215471232685889,0.190023419456374,0.252030129759931,0.443461021310609,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0.485510353031154,11.2048167998264,12.1652317463417,48.0892490663606,26.6013057078333,3.2703773457067,9.66619204031676,5.05517737593137,2.65974201088189,2.87505128729943,0,0,0,508.344645607031,75.9313615837705,109.838155655095,0,0,0.633831403506179,41.6778774445032,48.9112137861127,0.449949858640699,0.988866362566974,0,23.9680088414724,16.1371688235053,0.311068836925433,0.270011876663381,0,1.99955689082663,2.87129103237098,0.244981598429908,0.191690942036473,0,0,0,0,0.131886287730194,0.182975287204819,0.52091337055676,0.279182999001381,0.56276261003168,0.61119299110724,1.76777151284201,0.854230084794618,0.559198337475902,0.757261933331841,0.453429360640713,9.56552812715537,5.16254326188832,1.3599426674155,5.93673510801599,3.89865850468601,0.448026887097336,2.38755514223978,37.4946709671727,26.4981724694926,26.1471285137652,0.845060518660083,17.9657068380045,5.09610479413291,0,6.71122227134764,7.85415582972806,4.54972000513305,2.05530983494308,0.258937883647172,0.29688427812965,8.32729568477452,4.87144765299426,9.22461989024234,5.57673770044703,6.34979018532806,3.76999773989026,0.988779870937496,1.3013942122792,1.76922110389975,21.5149910430054,7.72945314611377,11.1521308221101,11.1835056730873,0,0.628340120440365,11.4955674843866,0,0,0,0.299581278809645,0,0.125654352112864,0,0.255715457330331,0,0.162241263067758,29.4315761527414,8.8328949133166,1.51633655060205,7.78634866779954,2.34216797332867,4.36813998423599,6.84236093260327,11.0014517020072,5.17077393550092,12.4270308676304,10.5882948752494,9.31332134660456,0.431135985865684,1.89106080167819,1.93546236580344,6.57587197282724,16.4047877043103,29.9496863209063,44.6547236005237,1.59227413454795,0,0,0,15.9486844852336,30.4883877975425,34.2117916775928,30.5400708904921,29.1211062986158,31.007689690363,28.8342091490506,26.8273401399619,11.9100649214513,41.3045223282836,41.8627033401693,11.2685645268739,15.7895986419359,33.1520674089486,11.9443712696731,0.841159794256509,0.617427674275707,0.991256348951394,6.87571473325215,2.77274725695804,2.09013004674395,7.34544529535932,9.4791256572971,16.0112191568307,21.1150444984941,27.5226855695817,30.469306623942,39.7109629904426,34.6184261351602,36.8482124655137,24.268124033664,42.7953338751895,33.2565926334793,2.0863469104839,2.51346727741403,6.76246414038483,2.8511185898344,2.52138233317913,1.75339549725796,3.41477300470989,0.295220295959204,0.941992367048249,1.48076596706161,0.592905254174298,3.00321190288969,3.93117990226406,3.59779379815766,7.30296436998611,12.0588579876208,18.3330613282622,14.6725030099913,4.37765112292595,20.8666674022942,11.5014565221884,21.5841749647732,21.2185617717901,9.59799736199025,13.6342034276653,4.3419916922703,4.61882975416512,7.20067364727842,6.02970412835496,6.62005834523234,7.27539769694356,11.2229192486017,12.1402256851867,18.9279638422065,69.0441931185117,96.5586046868659,88.0190322989329,8.84861899464985,75.2906520935305,45.8537515703392,0,0,11.3105782794378,24.2824336748165,0.80275294993896,1.17211686592203,149.180800292775,18.6828486131236,7.2566890465739,5.0757036758563,0.430846795465598,0.238968797952552,0,0,2.02405350837447,1.16902343164525,1.58115111178609,0,19.3038515883245,47.0093193681554,20.8495307972577,17.6518031580613,2.65490276679926,2.91336763385978,2.72091201268276,3.39489143560617,7.38254732201932,7.68587869859819,11.1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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=100689 | |||
|HGNC= | |||
|MCL_coexpression_id=214 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BMS2 | |||
|association_with_transcript=15bp_to_ENSMUST00000046186,NM_133903,uc008xai.2_5end | |||
|cluster_id=chr5:33560809..33560871,- | |||
|description=CAGE_peak_1_at_Spon2_5end | |||
|id=chr5:33560809..33560871,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!3.56e-10!33;UBERON:0004535!1.00e-09!23;UBERON:0001009!1.00e-09!23;UBERON:0001048!1.48e-09!147;UBERON:0007100!1.79e-09!18;UBERON:0000948!1.79e-09!18;UBERON:0005498!1.79e-09!18;UBERON:0004140!1.79e-09!18;UBERON:0009881!1.79e-09!18;UBERON:0004141!1.79e-09!18;UBERON:0003084!1.79e-09!18;UBERON:0007005!1.79e-09!18;UBERON:0004139!1.79e-09!18;UBERON:0004291!1.79e-09!18;UBERON:0003914!6.27e-09!47;UBERON:0000926!7.31e-08!193;UBERON:0004120!7.31e-08!193;UBERON:0006603!7.31e-08!193 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004872,2.07e-10,33;UBERON:0004535,6.01e-10,23;UBERON:0001009,6.01e-10,23;UBERON:0007100,1.09e-09,18;UBERON:0000948,1.09e-09,18;UBERON:0005498,1.09e-09,18;UBERON:0004140,1.09e-09,18;UBERON:0009881,1.09e-09,18;UBERON:0004141,1.09e-09,18;UBERON:0003084,1.09e-09,18;UBERON:0007005,1.09e-09,18;UBERON:0004139,1.09e-09,18;UBERON:0004291,1.09e-09,18;UBERON:0003914,7.22e-09,47;UBERON:0001048,1.34e-08,134 | |||
|phase1_expression=23.7020293715095,0,0,0,0,0.503637815735669,0.700837921786577,0,0,0,0,0,0,0,1.99865857089398,2.02475267389826,2.09868563438444,0,0.411343300817216,0,6.63337663178344,0.198581902401771,0.261199789138935,0.639969691173627,0.68822784320151,0,0,0.215471232685889,0.190023419456374,0.252030129759931,0.443461021310609,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0.485510353031154,11.2048167998264,12.1652317463417,48.0892490663606,26.6013057078333,3.2703773457067,9.66619204031676,5.05517737593137,2.65974201088189,2.87505128729943,0,0,0,508.344645607031,75.9313615837705,109.838155655095,0,0,0.633831403506179,41.6778774445032,48.9112137861127,0.449949858640699,0.988866362566974,0,23.9680088414724,16.1371688235053,0.311068836925433,0.270011876663381,0,1.99955689082663,2.87129103237098,0.244981598429908,0.191690942036473,0,0,0,0,0.131886287730194,0.182975287204819,0.52091337055676,0.279182999001381,0.56276261003168,0.61119299110724,1.76777151284201,0.854230084794618,0.559198337475902,0.757261933331841,0.453429360640713,9.56552812715537,5.16254326188832,1.3599426674155,5.93673510801599,3.89865850468601,0.448026887097336,2.38755514223978,37.4946709671727,26.4981724694926,26.1471285137652,0.845060518660083,17.9657068380045,5.09610479413291,0,6.71122227134764,7.85415582972806,4.54972000513305,2.05530983494308,0.258937883647172,0.29688427812965,8.32729568477452,4.87144765299426,9.22461989024234,5.57673770044703,6.34979018532806,3.76999773989026,0.988779870937496,1.3013942122792,1.76922110389975,21.5149910430054,7.72945314611377,11.1521308221101,11.1835056730873,0,0.628340120440365,11.4955674843866,0,0,0,0.299581278809645,0,0.125654352112864,0,0.255715457330331,0,0.162241263067758,29.4315761527414,8.8328949133166,1.51633655060205,7.78634866779954,2.34216797332867,4.36813998423599,6.84236093260327,11.0014517020072,5.17077393550092,12.4270308676304,10.5882948752494,9.31332134660456,0.431135985865684,1.89106080167819,1.93546236580344,6.57587197282724,16.4047877043103,29.9496863209063,44.6547236005237,1.59227413454795,0,0,0,15.9486844852336,30.4883877975425,34.2117916775928,30.5400708904921,29.1211062986158,31.007689690363,28.8342091490506,26.8273401399619,11.9100649214513,41.3045223282836,41.8627033401693,11.2685645268739,15.7895986419359,33.1520674089486,11.9443712696731,0.841159794256509,0.617427674275707,0.991256348951394,6.87571473325215,2.77274725695804,2.09013004674395,7.34544529535932,9.4791256572971,16.0112191568307,21.1150444984941,27.5226855695817,30.469306623942,39.7109629904426,34.6184261351602,36.8482124655137,24.268124033664,42.7953338751895,33.2565926334793,2.0863469104839,2.51346727741403,6.76246414038483,2.8511185898344,2.52138233317913,1.75339549725796,3.41477300470989,0.295220295959204,0.941992367048249,1.48076596706161,0.592905254174298,3.00321190288969,3.93117990226406,3.59779379815766,7.30296436998611,12.0588579876208,18.3330613282622,14.6725030099913,4.37765112292595,20.8666674022942,11.5014565221884,21.5841749647732,21.2185617717901,9.59799736199025,13.6342034276653,4.3419916922703,4.61882975416512,7.20067364727842,6.02970412835496,6.62005834523234,7.27539769694356,11.2229192486017,12.1402256851867,18.9279638422065,69.0441931185117,96.5586046868659,88.0190322989329,8.84861899464985,75.2906520935305,45.8537515703392,0,0,11.3105782794378,24.2824336748165,0.80275294993896,1.17211686592203,149.180800292775,18.6828486131236,7.2566890465739,5.0757036758563,0.430846795465598,0.238968797952552,0,0,2.02405350837447,1.16902343164525,1.58115111178609,0,19.3038515883245,47.0093193681554,20.8495307972577,17.6518031580613,2.65490276679926,2.91336763385978,2.72091201268276,3.39489143560617,7.38254732201932,7.68587869859819,11.1124166062335,14.5413491791002,14.2598951353889,9.7971394960103,12.6502330289999,13.4076206222643,1.02131881726136,1.62054984628179,2.32845630808958,4.07240366560025,4.61084607469911,7.31312152168489,8.22745103010605,1.522324745573,1.17335854031855,4.02480934641258,8.82113592219848,2.96795255294664,7.58882805470756,15.6210475563924,11.5791173683042,12.3105674808796,29.7310453362448,1.8542530201051,3.93003025835061,40.2454392528284,27.0384009959779,12.2439497053049,5.46776910884101,10.2950177942935,0.339956859987711,0,0.138199973804424,19.0934123603023,3.32152793260192,14.6390016331331,22.2491002092911,21.1179178974613,20.7444435558869,31.1536640148936,30.251164795473,45.0220220212531,27.7376042844437,13.0481255748254,0,0.897099276263873,1.82004339502807,2.13896307178452,6.32883135040882,6.25137664315879,6.33729088687071,10.8069639420479,4.29923312145414,0.724752362478018,1.15212002503146,0.632022241256357,5.27085559754427,5.23825881540619,4.02754551231165,3.22248052201467,2.98022032171897,2.40390899039938,1.9199638532695,2.72609414859999,1.37172251979,1.51239277705261,1.36441033035653,1.6356013078856,1.75315353272353,4.0811469050738,0,0,0,38.4447292124059,31.5306558757986,69.0481623487589,18.6500489798787,5.517293144389,0,0,0,0.343706364687375,0,0.755393897389701,0,0,0,0,0.5189367379208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| |||
|short_description=p1@Spon2 | |||
}} |
Latest revision as of 23:04, 25 September 2015
Short description: | p1@Spon2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Spon2_5end |
Coexpression cluster: | MCL_coexpression_mm9:214 |
Association with transcript: | 15bp_to_ENSMUST00000046186, NM_133903, uc008xai.2_5end |
EntrezGene: | Spon2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
splanchnic layer of lateral plate mesoderm | 2.07e-10 | 33 |
cardiovascular system | 6.01e-10 | 23 |
circulatory system | 6.01e-10 | 23 |
primary circulatory organ | 1.09e-09 | 18 |
heart | 1.09e-09 | 18 |
primitive heart tube | 1.09e-09 | 18 |
primary heart field | 1.09e-09 | 18 |
anterior lateral plate mesoderm | 1.09e-09 | 18 |
heart tube | 1.09e-09 | 18 |
heart primordium | 1.09e-09 | 18 |
cardiac mesoderm | 1.09e-09 | 18 |
cardiogenic plate | 1.09e-09 | 18 |
heart rudiment | 1.09e-09 | 18 |
epithelial tube | 7.22e-09 | 47 |
primordium | 1.34e-08 | 134 |