FFCP PHASE1:Mm9::chr19:53751853..53751869,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=73713 | |EntrezGene=73713 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=E9Q080,E9QPB0,E9PVK0,Q3UQS8 | |UniProt=E9Q080,E9QPB0,E9PVK0,Q3UQS8 | ||
|association_with_transcript=57bp_to_ENSMUST00000050565,ENSMUST00000095969,ENSMUST00000164202,NM_001170847,uc008hwz.2_5end | |association_with_transcript=57bp_to_ENSMUST00000050565,ENSMUST00000095969,ENSMUST00000164202,NM_001170847,uc008hwz.2_5end | ||
|cluster_id=chr19:53751853..53751869,+ | |||
|description=CAGE_peak_2_at_Rbm20_5end | |description=CAGE_peak_2_at_Rbm20_5end | ||
|id=chr19:53751853..53751869,+ | |id=chr19:53751853..53751869,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!1.50e-11!18;UBERON:0000948!1.50e-11!18;UBERON:0005498!1.50e-11!18;UBERON:0004140!1.50e-11!18;UBERON:0009881!1.50e-11!18;UBERON:0004141!1.50e-11!18;UBERON:0003084!1.50e-11!18;UBERON:0007005!1.50e-11!18;UBERON:0004139!1.50e-11!18;UBERON:0004291!1.50e-11!18;UBERON:0003103!2.10e-10!43;UBERON:0004535!1.50e-07!23;UBERON:0001009!1.50e-07!23 | |ontology_enrichment_uberon=UBERON:0007100!1.50e-11!18;UBERON:0000948!1.50e-11!18;UBERON:0005498!1.50e-11!18;UBERON:0004140!1.50e-11!18;UBERON:0009881!1.50e-11!18;UBERON:0004141!1.50e-11!18;UBERON:0003084!1.50e-11!18;UBERON:0007005!1.50e-11!18;UBERON:0004139!1.50e-11!18;UBERON:0004291!1.50e-11!18;UBERON:0003103!2.10e-10!43;UBERON:0004535!1.50e-07!23;UBERON:0001009!1.50e-07!23 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,3.80e-17,18;UBERON:0000948,3.80e-17,18;UBERON:0005498,3.80e-17,18;UBERON:0004140,3.80e-17,18;UBERON:0009881,3.80e-17,18;UBERON:0004141,3.80e-17,18;UBERON:0003084,3.80e-17,18;UBERON:0007005,3.80e-17,18;UBERON:0004139,3.80e-17,18;UBERON:0004291,3.80e-17,18;UBERON:0004535,3.65e-12,23;UBERON:0001009,3.65e-12,23;UBERON:0003103,4.75e-10,43;UBERON:0004872,6.43e-08,33 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,3.48840250208714,1.09843091367236,0.777719596297134,0.979904951377538,1.43752564364972,0,0,0,0,0.573066879877513,3.09403255366465,0.404632921719196,0,0,2.03306719241479,0,0,0,0,1.19840044207362,1.53687322128622,0.207379224616955,0,0.210324961351382,1.42825492201902,0.883474163806454,0.244981598429908,0.479227355091182,0.919218786610021,1.10115880999389,0.383062014255563,0.153606533256243,0.131886287730194,0.274462930807229,0.52091337055676,0,0,0.15279824777681,0.294628585473668,0.996601765593721,0.559198337475902,0.151452386666368,0,0,0,0,0,0,0,1.40444420131752,0,0,0,1.83096445709685,0,0,0,0,0,0,0.34255163915718,0,0,0,0.304465478312141,0,0,0.117588707135705,0,1.73036477414062,0.144599356919912,1.76922110389975,4.69123864847487,3.97514733228708,1.93950101254089,0,0.585561594023094,0,0,0,0,0,0.149790639404823,1.83000241127451,0,0.347648640384553,0,0,0.973447578406546,0.101839363850316,0.870848794270651,0.252722758433675,0.631325567659422,0,0.919608417733892,0.720248519221397,0.452114453507145,0.408218994907967,0.2562274405697,0.562210347358373,0.517406741478031,1.29340795759705,2.45837904218165,0.527853372491847,0.43839146485515,0.278047249225598,1.74126083261083,0,0.199034266818493,0,0,0,14.4988040774851,15.9477720787145,13.3245925481151,22.490749880595,22.0375939557092,21.4431286913456,26.7414036462969,31.1197145623558,34.7960720254165,24.5194176371086,21.3417703302824,28.3740833410495,23.8305979503292,21.2963611832319,20.1309628140558,0,0.411618449517138,0,0,0.426576501070468,0.464473343720877,0,0,0,0,0,0,0,0,0,0,0,0,0.758671603812327,1.82797620175566,3.38123207019241,2.24016460629846,1.93952487167626,1.47285221769669,0.569128834118316,0.147610147979602,0,0.246794327843601,0,1.00107063429656,0,0,0.202860121388503,0,0,0,0,0.274561413188081,0,0.372140947668503,0.312037673114561,0,0.358794827043824,0,0.369506380333209,1.51593129416388,1.62964976442026,1.01847051465113,0.704070744865506,0.502518772325447,0.952174563544055,0.780534591431195,0.788175720530955,0.44292937929755,0.318909537314974,0.163863314715738,0.690739927463582,0.433947175744535,0,0,0,0,0,0.703270119553219,0,6.5642441073137,3.15508219416257,2.73307121007647,1.72338718186239,0,0.668396022247182,0.283076530788832,0,0,1.18586333383957,1.60660658210904,0,0.178065603667255,0.325773918707152,0,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0.680879211507576,0.36012218806262,0,0,0,0,0,0,0.469343416127421,2.1183207086382,0,0.32977250588296,0.484393280087717,0.422190474497091,0.119372344003136,0.164140899745061,0,0.741701208042039,0,0.206386867963223,0,0,0,0,0,0.139951452323658,0,0,0,0.203319467126849,0,0.209088296014469,0,0,0.0826534557253359,0,0,0,0,0.149516546043979,0,0,0,0,0,0,0,0,0.576060012515731,0,0,0,0,0.179026695667481,0.198681354781265,0.120195449519969,0,0.100966449948148,0,0,0,0,0,2.0405734525369,26.8603003582618,38.666672198684,30.3871155618982,0,0,0,0,0,0.564751842617067,0.920650473014354,1.71868654031819,0.515559547031063,0,0.755393897389701,0.675022500231806,0,0.453142408984205,0,0.830298780673413,1.59609949360412,1.02440163452481,1.21553358534147,1.04806581313991,1.2869045591501,1.55572709461131,1.23621034343337,2.88827288632634,2.02157769411038,1.52087579934144,1.32038438970253,1.31098110457835,1.34452820050225,1.43588672389033,1.90517476513229,1.15884325944855,0.964546102318525,0.824171801606613,1.03039244094078,0.342869252385415,1.06485483695602,0.238436189947321,1.16277133305863,0.941093804153306,1.60767754994185,0.914639864363863,1.8414879800649,2.44447404922551,2.24456908663095,1.18635018124174,1.18205378850676,1.63692417267876,1.85924209423159,0.578719832943424,1.24905288968973,0.935726433781634,1.07435527024149,2.10417165275728,2.20591419119516,3.70988536992674 | |phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,3.48840250208714,1.09843091367236,0.777719596297134,0.979904951377538,1.43752564364972,0,0,0,0,0.573066879877513,3.09403255366465,0.404632921719196,0,0,2.03306719241479,0,0,0,0,1.19840044207362,1.53687322128622,0.207379224616955,0,0.210324961351382,1.42825492201902,0.883474163806454,0.244981598429908,0.479227355091182,0.919218786610021,1.10115880999389,0.383062014255563,0.153606533256243,0.131886287730194,0.274462930807229,0.52091337055676,0,0,0.15279824777681,0.294628585473668,0.996601765593721,0.559198337475902,0.151452386666368,0,0,0,0,0,0,0,1.40444420131752,0,0,0,1.83096445709685,0,0,0,0,0,0,0.34255163915718,0,0,0,0.304465478312141,0,0,0.117588707135705,0,1.73036477414062,0.144599356919912,1.76922110389975,4.69123864847487,3.97514733228708,1.93950101254089,0,0.585561594023094,0,0,0,0,0,0.149790639404823,1.83000241127451,0,0.347648640384553,0,0,0.973447578406546,0.101839363850316,0.870848794270651,0.252722758433675,0.631325567659422,0,0.919608417733892,0.720248519221397,0.452114453507145,0.408218994907967,0.2562274405697,0.562210347358373,0.517406741478031,1.29340795759705,2.45837904218165,0.527853372491847,0.43839146485515,0.278047249225598,1.74126083261083,0,0.199034266818493,0,0,0,14.4988040774851,15.9477720787145,13.3245925481151,22.490749880595,22.0375939557092,21.4431286913456,26.7414036462969,31.1197145623558,34.7960720254165,24.5194176371086,21.3417703302824,28.3740833410495,23.8305979503292,21.2963611832319,20.1309628140558,0,0.411618449517138,0,0,0.426576501070468,0.464473343720877,0,0,0,0,0,0,0,0,0,0,0,0,0.758671603812327,1.82797620175566,3.38123207019241,2.24016460629846,1.93952487167626,1.47285221769669,0.569128834118316,0.147610147979602,0,0.246794327843601,0,1.00107063429656,0,0,0.202860121388503,0,0,0,0,0.274561413188081,0,0.372140947668503,0.312037673114561,0,0.358794827043824,0,0.369506380333209,1.51593129416388,1.62964976442026,1.01847051465113,0.704070744865506,0.502518772325447,0.952174563544055,0.780534591431195,0.788175720530955,0.44292937929755,0.318909537314974,0.163863314715738,0.690739927463582,0.433947175744535,0,0,0,0,0,0.703270119553219,0,6.5642441073137,3.15508219416257,2.73307121007647,1.72338718186239,0,0.668396022247182,0.283076530788832,0,0,1.18586333383957,1.60660658210904,0,0.178065603667255,0.325773918707152,0,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0.680879211507576,0.36012218806262,0,0,0,0,0,0,0.469343416127421,2.1183207086382,0,0.32977250588296,0.484393280087717,0.422190474497091,0.119372344003136,0.164140899745061,0,0.741701208042039,0,0.206386867963223,0,0,0,0,0,0.139951452323658,0,0,0,0.203319467126849,0,0.209088296014469,0,0,0.0826534557253359,0,0,0,0,0.149516546043979,0,0,0,0,0,0,0,0,0.576060012515731,0,0,0,0,0.179026695667481,0.198681354781265,0.120195449519969,0,0.100966449948148,0,0,0,0,0,2.0405734525369,26.8603003582618,38.666672198684,30.3871155618982,0,0,0,0,0,0.564751842617067,0.920650473014354,1.71868654031819,0.515559547031063,0,0.755393897389701,0.675022500231806,0,0.453142408984205,0,0.830298780673413,1.59609949360412,1.02440163452481,1.21553358534147,1.04806581313991,1.2869045591501,1.55572709461131,1.23621034343337,2.88827288632634,2.02157769411038,1.52087579934144,1.32038438970253,1.31098110457835,1.34452820050225,1.43588672389033,1.90517476513229,1.15884325944855,0.964546102318525,0.824171801606613,1.03039244094078,0.342869252385415,1.06485483695602,0.238436189947321,1.16277133305863,0.941093804153306,1.60767754994185,0.914639864363863,1.8414879800649,2.44447404922551,2.24456908663095,1.18635018124174,1.18205378850676,1.63692417267876,1.85924209423159,0.578719832943424,1.24905288968973,0.935726433781634,1.07435527024149,2.10417165275728,2.20591419119516,3.70988536992674 | ||
|short_description=p2@Rbm20 | |short_description=p2@Rbm20 | ||
}} | }} |
Latest revision as of 23:14, 25 September 2015
Short description: | p2@Rbm20 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Rbm20_5end |
Coexpression cluster: | NA |
Association with transcript: | 57bp_to_ENSMUST00000050565, ENSMUST00000095969, ENSMUST00000164202, NM_001170847, uc008hwz.2_5end |
EntrezGene: | Rbm20 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 3.80e-17 | 18 |
heart | 3.80e-17 | 18 |
primitive heart tube | 3.80e-17 | 18 |
primary heart field | 3.80e-17 | 18 |
anterior lateral plate mesoderm | 3.80e-17 | 18 |
heart tube | 3.80e-17 | 18 |
heart primordium | 3.80e-17 | 18 |
cardiac mesoderm | 3.80e-17 | 18 |
cardiogenic plate | 3.80e-17 | 18 |
heart rudiment | 3.80e-17 | 18 |
cardiovascular system | 3.65e-12 | 23 |
circulatory system | 3.65e-12 | 23 |
compound organ | 4.75e-10 | 43 |
splanchnic layer of lateral plate mesoderm | 6.43e-08 | 33 |