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FFCP PHASE1:Mm9::chr17:15842061..15842106,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr17:15842061..15842106,+
|DHSsupport=NA
|short_description=p3@Chd1
|DPIdataset=NA
|description=CAGE_peak_3_at_Chd1_5end
|association_with_transcript=79bp_to_ENSMUST00000173159_5end
|EntrezGene=12648
|EntrezGene=12648
|HGNC=
|HGNC=
|MCL_coexpression_id=562
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=79bp_to_ENSMUST00000173159_5end
|cluster_id=chr17:15842061..15842106,+
|description=CAGE_peak_3_at_Chd1_5end
|id=chr17:15842061..15842106,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000239,8.21e-09,6;CL:0000677,8.21e-09,6;CL:0000584,8.21e-09,6;CL:0002563,2.00e-08,9;CL:0002251,2.00e-08,9;CL:0000075,2.38e-07,7;CL:0000066,7.66e-07,25
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0003929!1.84e-10!55;UBERON:0002405!2.01e-10!70;UBERON:0001007!9.89e-10!128;UBERON:0001555!9.89e-10!128;UBERON:0007026!9.89e-10!128;UBERON:0004923!2.22e-09!24;UBERON:0004119!3.16e-09!130;UBERON:0000925!3.16e-09!130;UBERON:0006595!3.16e-09!130;UBERON:0000344!5.00e-09!15;UBERON:0004921!5.63e-09!126;UBERON:0004185!5.63e-09!126;UBERON:0000490!1.65e-08!66;UBERON:0005057!2.11e-08!51;UBERON:0001242!5.11e-08!13;UBERON:0000060!5.11e-08!13;UBERON:0001262!5.11e-08!13;UBERON:0004786!5.11e-08!13;UBERON:0005911!7.97e-08!69
|ontology_enrichment_uberon_v019_2=UBERON:0004923,3.64e-15,24;UBERON:0000344,2.51e-14,15;UBERON:0005409,2.65e-13,47;UBERON:0001007,1.05e-12,116;UBERON:0001555,1.05e-12,116;UBERON:0007026,1.05e-12,116;UBERON:0001242,1.93e-12,13;UBERON:0001262,1.93e-12,13;UBERON:0004786,1.93e-12,13;UBERON:0004119,3.01e-12,118;UBERON:0000925,3.01e-12,118;UBERON:0006595,3.01e-12,118;UBERON:0004921,1.81e-11,114;UBERON:0000160,2.91e-11,31;UBERON:0003929,1.40e-08,55;UBERON:0003350,2.00e-08,9;UBERON:0004808,2.00e-08,9;UBERON:0001277,2.00e-08,9;UBERON:0000490,3.26e-07,66;UBERON:0002107,3.43e-07,22;UBERON:0007499,3.43e-07,22;UBERON:0006925,3.43e-07,22;UBERON:0009497,3.43e-07,22;UBERON:0000015,3.43e-07,22;UBERON:0002423,3.43e-07,22;UBERON:0006235,3.43e-07,22;UBERON:0008835,3.43e-07,22;UBERON:0003894,3.43e-07,22;UBERON:0004161,3.43e-07,22;UBERON:0008836,3.43e-07,22;UBERON:0002365,8.92e-07,25;UBERON:0002330,8.92e-07,25
|phase1_expression=0.480446541314382,21.287499866001,23.2049612088663,15.4256747766483,9.01612313903425,6.04365378882803,3.97141489012394,0.903863264091034,6.05391505252167,9.36258105287974,0.171217968225505,0.478632953972018,0.171200729931206,0.699363219351979,9.32707333083856,9.11138703254217,12.5921138063066,1.26184866143295,0.548457734422955,2.12194825899015,0.425216450755349,0.397163804803541,0,3.35984087866154,2.98232065387321,17.8011908875656,9.04600191934057,8.18790684206378,2.09025761402011,5.29263272495855,3.32595765982957,1.27006134691926,0.61506478758457,0,1.44425809875637,1.16364251750945,0.612508068787107,1.25559489221072,0,2.09409497589519,1.17646297606203,0,0,0.503587271902309,0.506884656097573,0,0.782391344348039,0,0.219686182734472,0.58328969722285,0.139986421625363,0,1.17447824240415,1.45072428402269,1.34437519656986,0,0,0.515672092277442,0.404632921719196,0,0,0.677689064138264,0,0,0,0.7104801149461,0.299600110518405,0.768436610643109,0.207379224616955,0.135005938331691,0,0,0,0.122490799214954,0,0.919218786610021,0,0.127687338085188,0.153606533256243,0.131886287730194,0,0,0.279182999001381,0,0.30559649555362,0,0.142371680799103,0.372798891650601,0.151452386666368,0,2.89864488701678,0,0,0.539703191637817,0,1.79210754838934,0.983110940922263,0,0,0,0,1.28326477414318,0,0,0,0,0,1.82694207550496,1.03575153458869,0,0.520455980298408,0,0.461230994512117,0.150722640552623,0.705532242814229,0,0.494389935468748,0.433798070759735,2.65383165584962,1.13236794963186,2.42925670306433,3.39412677194655,0,0.292780797011547,0.83778682725382,6.13096932500619,2.99537811264801,0.599902730993408,1.77898317902291,0.149790639404823,0,0.251308704225729,0,0.255715457330331,0,0.162241263067758,0.203678727700633,1.7416975885413,0,0.420883711772948,0.390361328888111,0.229902104433473,0.180062129805349,0.150704817835715,0.340182495756639,0.12811372028485,0.374806898238915,0.258703370739016,0.215567992932842,0.378212160335639,0.703804496655795,0.219195732427575,0,0,0,0.796137067273973,0,0.772043721344145,0.568326998791185,0.828503090142008,0.703578179943289,0.540186184383045,0.473489471170421,0,0.925602677324269,0,0.268273401399619,0.116765342367169,0.16455984991348,0.164167464079095,0.0810688095458557,0.146199987425332,0,0.402619256281115,0.210289948564127,0.308713837137853,15.1992640172547,3.70230793328962,0.639864751605702,0.464473343720877,0.128867461322093,0.403367049246685,0.444756087689741,0,2.37264530772256,0.164698954724011,1.00534083520108,0.397912944082302,0.38992817423824,4.49409704327111,3.02593269824572,3.98282546508734,0.189667900953082,0.342745537829186,1.1270773567308,0.203651327845314,0.193952487167626,0.350679099451593,0.252946148497029,0.442830443938806,0.470996183524124,0.370191491765402,0.889357881261447,3.50374722003798,3.93117990226406,4.27238013531222,5.07150303471257,2.894125917029,2.80088436959562,2.30156909960649,2.10775794807546,1.64736847912849,5.75072826109418,1.48856379067401,0.312037673114561,0.757736633841335,0.896987067609561,1.4473305640901,0.739012760666419,0,0.325929952884052,0.169745085775188,0,0.335012514883631,0.714130922658041,0.195133647857799,0.315270288212382,0.221464689648775,0,0.655453258862952,0.172684981865896,0.289298117163023,0,1.63171705145613,0,0.275936746304732,0,0.234423373184406,0,0.252470927204373,0.94652465824877,0,0.430846795465598,0.238968797952552,0.445597348164788,0.566153061577665,1.21443210502468,0.292255857911312,1.18586333383957,0,0.283880170416537,0.178065603667255,0,0.164970122972535,0,0.728341908464944,0.604647113929502,0.188605079755898,0,0,0.516856586336442,0.363533729477506,0,0,0,0,0,0.36012218806262,0.129358683782755,0,0.354680467284547,0,0,0,0.23467170806371,0,0.882113592219848,0.16488625294148,0.161464426695906,0.180938774784468,0.119372344003136,0.164140899745061,2.04036585640896,0,5.46786818553129,0.206386867963223,1.85194527369712,3.57900068308913,6.56132293060921,5.0331198105435,2.71965487990169,3.21888340344413,2.07299960706636,2.86401185404534,0.316335993581135,0.203319467126849,0.216010681643603,0.209088296014469,0.655087691238533,0.134864346384821,0.743881101528023,2.35580347785627,1.03691978633434,1.24267862617385,0,0.149516546043979,0.165458490457098,0.194451188344048,0.129159823477731,0.337912250981556,0.352071715937262,0,0.209718688851422,0.241584120826006,0,0.948033361884535,0.810900861160657,0.410843828659309,0.25984164595559,0.716106782669926,0.79472541912506,1.08175904567972,0.295379054349154,0.504832249740738,0.762068066549998,0.604957110821043,0.38983152295901,0.769694733122636,1.28564592399726,0,1.33191572024439,0.62799699626633,0.335769232728157,0.386379188064381,0.375364950902364,0.183151624267265,0,2.00628841614145,0,0,0,0.171853182343688,0.685082519770642,0,0,0,0.453142408984205,0,0.103787347584177,0,0.341467211508268,0.243106717068294,1.04806581313991,0.183843508450014,0.44449345560323,0,0,0,0.25347929989024,0,0.0936415074698824,0.256100609619477,0.17230640686684,0.476293691283074,0.347652977834566,0.192909220463705,0.412085900803307,0.588795680537589,0.342869252385415,0.354951612318675,0.238436189947321,0.145346416632329,0.188218760830661,0.507687647350059,0.182927972872773,0.263069711437843,0.407412341537585,0.561142271657738,0.355905054372522,0.197008964751127,0.409231043169689,0.154936841185966,0,0,0.233931608445408,0.429742108096597,0.382576664137687,0.441182838239031,0.695603506861264
|phase1_expression=0.480446541314382,21.287499866001,23.2049612088663,15.4256747766483,9.01612313903425,6.04365378882803,3.97141489012394,0.903863264091034,6.05391505252167,9.36258105287974,0.171217968225505,0.478632953972018,0.171200729931206,0.699363219351979,9.32707333083856,9.11138703254217,12.5921138063066,1.26184866143295,0.548457734422955,2.12194825899015,0.425216450755349,0.397163804803541,0,3.35984087866154,2.98232065387321,17.8011908875656,9.04600191934057,8.18790684206378,2.09025761402011,5.29263272495855,3.32595765982957,1.27006134691926,0.61506478758457,0,1.44425809875637,1.16364251750945,0.612508068787107,1.25559489221072,0,2.09409497589519,1.17646297606203,0,0,0.503587271902309,0.506884656097573,0,0.782391344348039,0,0.219686182734472,0.58328969722285,0.139986421625363,0,1.17447824240415,1.45072428402269,1.34437519656986,0,0,0.515672092277442,0.404632921719196,0,0,0.677689064138264,0,0,0,0.7104801149461,0.299600110518405,0.768436610643109,0.207379224616955,0.135005938331691,0,0,0,0.122490799214954,0,0.919218786610021,0,0.127687338085188,0.153606533256243,0.131886287730194,0,0,0.279182999001381,0,0.30559649555362,0,0.142371680799103,0.372798891650601,0.151452386666368,0,2.89864488701678,0,0,0.539703191637817,0,1.79210754838934,0.983110940922263,0,0,0,0,1.28326477414318,0,0,0,0,0,1.82694207550496,1.03575153458869,0,0.520455980298408,0,0.461230994512117,0.150722640552623,0.705532242814229,0,0.494389935468748,0.433798070759735,2.65383165584962,1.13236794963186,2.42925670306433,3.39412677194655,0,0.292780797011547,0.83778682725382,6.13096932500619,2.99537811264801,0.599902730993408,1.77898317902291,0.149790639404823,0,0.251308704225729,0,0.255715457330331,0,0.162241263067758,0.203678727700633,1.7416975885413,0,0.420883711772948,0.390361328888111,0.229902104433473,0.180062129805349,0.150704817835715,0.340182495756639,0.12811372028485,0.374806898238915,0.258703370739016,0.215567992932842,0.378212160335639,0.703804496655795,0.219195732427575,0,0,0,0.796137067273973,0,0.772043721344145,0.568326998791185,0.828503090142008,0.703578179943289,0.540186184383045,0.473489471170421,0,0.925602677324269,0,0.268273401399619,0.116765342367169,0.16455984991348,0.164167464079095,0.0810688095458557,0.146199987425332,0,0.402619256281115,0.210289948564127,0.308713837137853,15.1992640172547,3.70230793328962,0.639864751605702,0.464473343720877,0.128867461322093,0.403367049246685,0.444756087689741,0,2.37264530772256,0.164698954724011,1.00534083520108,0.397912944082302,0.38992817423824,4.49409704327111,3.02593269824572,3.98282546508734,0.189667900953082,0.342745537829186,1.1270773567308,0.203651327845314,0.193952487167626,0.350679099451593,0.252946148497029,0.442830443938806,0.470996183524124,0.370191491765402,0.889357881261447,3.50374722003798,3.93117990226406,4.27238013531222,5.07150303471257,2.894125917029,2.80088436959562,2.30156909960649,2.10775794807546,1.64736847912849,5.75072826109418,1.48856379067401,0.312037673114561,0.757736633841335,0.896987067609561,1.4473305640901,0.739012760666419,0,0.325929952884052,0.169745085775188,0,0.335012514883631,0.714130922658041,0.195133647857799,0.315270288212382,0.221464689648775,0,0.655453258862952,0.172684981865896,0.289298117163023,0,1.63171705145613,0,0.275936746304732,0,0.234423373184406,0,0.252470927204373,0.94652465824877,0,0.430846795465598,0.238968797952552,0.445597348164788,0.566153061577665,1.21443210502468,0.292255857911312,1.18586333383957,0,0.283880170416537,0.178065603667255,0,0.164970122972535,0,0.728341908464944,0.604647113929502,0.188605079755898,0,0,0.516856586336442,0.363533729477506,0,0,0,0,0,0.36012218806262,0.129358683782755,0,0.354680467284547,0,0,0,0.23467170806371,0,0.882113592219848,0.16488625294148,0.161464426695906,0.180938774784468,0.119372344003136,0.164140899745061,2.04036585640896,0,5.46786818553129,0.206386867963223,1.85194527369712,3.57900068308913,6.56132293060921,5.0331198105435,2.71965487990169,3.21888340344413,2.07299960706636,2.86401185404534,0.316335993581135,0.203319467126849,0.216010681643603,0.209088296014469,0.655087691238533,0.134864346384821,0.743881101528023,2.35580347785627,1.03691978633434,1.24267862617385,0,0.149516546043979,0.165458490457098,0.194451188344048,0.129159823477731,0.337912250981556,0.352071715937262,0,0.209718688851422,0.241584120826006,0,0.948033361884535,0.810900861160657,0.410843828659309,0.25984164595559,0.716106782669926,0.79472541912506,1.08175904567972,0.295379054349154,0.504832249740738,0.762068066549998,0.604957110821043,0.38983152295901,0.769694733122636,1.28564592399726,0,1.33191572024439,0.62799699626633,0.335769232728157,0.386379188064381,0.375364950902364,0.183151624267265,0,2.00628841614145,0,0,0,0.171853182343688,0.685082519770642,0,0,0,0.453142408984205,0,0.103787347584177,0,0.341467211508268,0.243106717068294,1.04806581313991,0.183843508450014,0.44449345560323,0,0,0,0.25347929989024,0,0.0936415074698824,0.256100609619477,0.17230640686684,0.476293691283074,0.347652977834566,0.192909220463705,0.4120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|short_description=p3@Chd1
}}
}}

Latest revision as of 23:51, 25 September 2015

Short description:p3@Chd1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Chd1_5end
Coexpression cluster:MCL_coexpression_mm9:562
Association with transcript: 79bp_to_ENSMUST00000173159_5end
EntrezGene:Chd1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Chd1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I521.29
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I623.20
CD326+ enterocyte, pool1.CNhs13542.11848-124I315.43
CD326+ enterocyte, pool2.CNhs13197.11849-124I49.02
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I76.04
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I83.97
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.90
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E76.05
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F29.36
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.48
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.70
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A19.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A39.11
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A512.59
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.26
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.55
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.12
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.43
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.40
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D13.36
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.98
GP2+ M cell, pool1.CNhs13228.11845-124H917.80
GP2+ M cell, pool2.CNhs13231.11846-124I19.05
GP2+ M cell, pool3.CNhs13240.11847-124I28.19
Ileum epithelium, pool1.CNhs13199.10252-104B92.09
Ileum epithelium, pool2.CNhs13232.10253-104C15.29
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C83.33
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.44
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.16
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.61
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.26
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H32.09
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.50
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.51
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I91.45
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.31
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.90
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.79
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.98
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.83
accessory axillary lymph node, adult.CNhs10475.1063-29H91.04
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.71
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G22.65
bone (os femoris), neonate N02.CNhs11227.1985-43F51.13
bone (os femoris), neonate N16.CNhs11225.1525-43A62.43
bone (os femoris), neonate N20.CNhs11195.1350-25C33.39
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.84
colon, adult.CNhs10468.36-18H76.13
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C73.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.78
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.25
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.74
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.34
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.37
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.77
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E90.83
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.93
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.31
intestinal mucosa, adult.CNhs10506.860-29I315.20
intestine, adult.CNhs10496.178-9A33.70
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D12.37
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B81.01
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D14.49
intestine, neonate N25.CNhs11121.1352-25E33.03
intestine, neonate N30.CNhs11131.1384-42G13.98
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.35
kidney, neonate N10.CNhs11206.758-6D50.25
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.47
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B20.89
liver, embryo E12.CNhs10601.355-15F83.50
liver, embryo E13.CNhs10524.378-3H63.93
liver, embryo E14.CNhs10594.409-16E14.27
liver, embryo E15.CNhs10520.433-16D75.07
liver, embryo E16.CNhs10523.462-17F52.89
liver, embryo E17.CNhs10510.481-18A32.80
liver, embryo E18.CNhs10579.499-43G42.30
liver, neonate N00.CNhs11117.641-24F42.11
liver, neonate N03.CNhs11123.1345-25G21.65
liver, neonate N06.CNhs11101.684-20A85.75
liver, neonate N07.CNhs11103.716-20H21.49
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.76
liver, neonate N25.CNhs11198.1368-26H10.90
liver, neonate N30.CNhs11106.1382-42D11.45
lung, adult.CNhs10474.28-22B10.74
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.66
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.63
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.88
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I12.04
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G25.47
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F21.85
spleen, neonate N10.CNhs11116.752-24D13.58
spleen, neonate N20.CNhs11112.824-19H16.56
spleen, neonate N25.CNhs11099.1354-25G35.03
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.72
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C93.22
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.07
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.74
stomach, neonate N25.CNhs11104.1355-25E42.36
stomach, neonate N30.CNhs11134.1386-42I11.04
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.95
thymus, embryo E14.CNhs11041.402-44I40.81
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.72
thymus, embryo E18.CNhs10595.1273-19G40.79
thymus, neonate N02.CNhs11181.1541-43F81.08
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.50
thymus, neonate N07.CNhs11211.713-19D30.76
thymus, neonate N10.CNhs11194.748-24E40.60
thymus, neonate N20.CNhs11186.820-7A20.39
thymus, neonate N25.CNhs11125.1362-25G70.77
thymus, neonate N30.CNhs11132.1393-42G21.29
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.33
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.63
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F82.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B11.05
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
organ component layer3.64e-1524
mucosa2.51e-1415
gastrointestinal system2.65e-1347
digestive system1.05e-12116
digestive tract1.05e-12116
primitive gut1.05e-12116
intestinal mucosa1.93e-1213
wall of intestine1.93e-1213
gastrointestinal system mucosa1.93e-1213
endoderm-derived structure3.01e-12118
endoderm3.01e-12118
presumptive endoderm3.01e-12118
subdivision of digestive tract1.81e-11114
intestine2.91e-1131
gut epithelium1.40e-0855
epithelium of mucosa2.00e-089
gastrointestinal system epithelium2.00e-089
intestinal epithelium2.00e-089
unilaminar epithelium3.26e-0766
liver3.43e-0722
epithelial sac3.43e-0722
digestive gland3.43e-0722
epithelium of foregut-midgut junction3.43e-0722
anatomical boundary3.43e-0722
hepatobiliary system3.43e-0722
foregut-midgut junction3.43e-0722
hepatic diverticulum3.43e-0722
liver primordium3.43e-0722
septum transversum3.43e-0722
liver bud3.43e-0722
exocrine gland8.92e-0725
exocrine system8.92e-0725
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