FFCP PHASE2:Mm9::chr10:42303410..42303422,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=NA |DPIdataset=NA |EntrezGene=entrezgene:21907 |HGNC= |MCL_coexpression_id=763 |TSSclassifier=NA |UniProt=uniprot:Q64104 |association_with_transcript=15bp_t...") |
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|DHSsupport=NA | |DHSsupport=NA | ||
|DPIdataset=NA | |DPIdataset=NA | ||
|EntrezGene= | |EntrezGene=21907 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=763 | |MCL_coexpression_id=763 | ||
|TSSclassifier=NA | |TSSclassifier=NA | ||
|UniProt= | |UniProt=Q64104 | ||
|association_with_transcript=15bp_to_ENSMUST00000019938_5end | |association_with_transcript=15bp_to_ENSMUST00000019938_5end | ||
|cluster_id=chr10:42303410..42303422,- | |cluster_id=chr10:42303410..42303422,- | ||
Latest revision as of 00:38, 26 September 2015
| Short description: | p3@Nr2e1 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_3_at_Nr2e1_5end |
| Coexpression cluster: | MCL_coexpression_mm9:763 |
| Association with transcript: | 15bp_to_ENSMUST00000019938_5end |
| EntrezGene: | Nr2e1 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p3@Nr2e1 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| neuron of cerebral cortex | 6.08e-16 | 6 |
| oligodendrocyte precursor cell | 5.61e-11 | 8 |
| ectodermal cell | 6.85e-10 | 44 |
| neurectodermal cell | 6.85e-10 | 44 |
| neural cell | 1.06e-08 | 43 |
| migratory neural crest cell | 1.20e-08 | 10 |
| neuron associated cell | 1.20e-08 | 10 |
| glial cell (sensu Vertebrata) | 1.20e-08 | 10 |
| neuron associated cell (sensu Vertebrata) | 1.20e-08 | 10 |
| glial cell | 1.20e-08 | 10 |
Showing 1 to 10 of 16 entries
| Ontology term | p-value | n |
|---|---|---|
| pre-chordal neural plate | 6.43e-33 | 49 |
| neurectoderm | 5.38e-26 | 64 |
| neural plate | 5.38e-26 | 64 |
| presumptive neural plate | 5.38e-26 | 64 |
| ecto-epithelium | 5.30e-24 | 73 |
| ectoderm-derived structure | 1.28e-21 | 95 |
| ectoderm | 1.28e-21 | 95 |
| presumptive ectoderm | 1.28e-21 | 95 |
| brain grey matter | 1.80e-21 | 29 |
| regional part of telencephalon | 1.80e-21 | 29 |
Showing 1 to 10 of 52 entries
