FFCP PHASE1:Mm9::chr2:157282653..157282682,+: Difference between revisions
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|id=chr2:157282653..157282682,+
|short_description=p7@Src
|description=CAGE_peak_7_at_Src_5end
|association_with_transcript=-138bp_to_ENSMUST00000109529_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=20779 | |EntrezGene=20779 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=24 | |||
|TSSclassifier=NA | |||
|UniProt=P05480 | |UniProt=P05480 | ||
|association_with_transcript=-138bp_to_ENSMUST00000109529_5end | |||
|cluster_id=chr2:157282653..157282682,+ | |||
|description=CAGE_peak_7_at_Src_5end | |||
|id=chr2:157282653..157282682,+ | |||
|ontology_enrichment_celltype=CL:0000239!2.56e-18!6;CL:0000677!2.56e-18!6;CL:0000212!2.56e-18!6;CL:0000584!2.56e-18!6;CL:0000075!1.33e-15!7;CL:0002563!5.64e-12!9;CL:0002251!5.64e-12!9;CL:0000473!4.75e-10!3;CL:0000627!4.75e-10!3;CL:0000682!4.75e-10!3;CL:0000066!1.48e-08!25;CL:0002076!6.86e-07!15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.27e-28,6;CL:0000677,1.27e-28,6;CL:0000584,1.27e-28,6;CL:0000075,1.74e-24,7;CL:0002563,5.82e-19,9;CL:0002251,5.82e-19,9;CL:0000682,2.98e-15,3;CL:0000066,1.67e-14,25;CL:0002076,3.34e-11,15;CL:0000223,2.79e-08,20;CL:0000473,8.30e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!3.80e-27!15;UBERON:0000160!9.79e-23!43;UBERON:0001242!7.25e-22!13;UBERON:0000060!7.25e-22!13;UBERON:0001262!7.25e-22!13;UBERON:0004786!7.25e-22!13;UBERON:0004923!1.19e-18!24;UBERON:0005409!4.50e-17!59;UBERON:0003350!5.64e-12!9;UBERON:0004808!5.64e-12!9;UBERON:0001277!5.64e-12!9;UBERON:0000331!1.14e-09!3;UBERON:0002116!1.14e-09!3;UBERON:0001204!1.14e-09!3;UBERON:0001168!1.14e-09!3;UBERON:0000485!1.15e-09!11;UBERON:0001007!3.96e-07!128;UBERON:0001555!3.96e-07!128;UBERON:0007026!3.96e-07!128;UBERON:0001962!4.73e-07!2;UBERON:0001961!4.73e-07!2;UBERON:0001744!4.73e-07!2;UBERON:0004119!6.05e-07!130;UBERON:0000925!6.05e-07!130;UBERON:0006595!6.05e-07!130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.14e-43,15;UBERON:0001242,4.52e-35,13;UBERON:0001262,4.52e-35,13;UBERON:0004786,4.52e-35,13;UBERON:0004923,1.19e-26,24;UBERON:0000160,1.34e-23,31;UBERON:0003350,5.82e-19,9;UBERON:0004808,5.82e-19,9;UBERON:0001277,5.82e-19,9;UBERON:0000485,1.94e-15,11;UBERON:0005409,6.82e-15,47;UBERON:0000331,1.22e-14,3;UBERON:0002116,1.22e-14,3;UBERON:0001204,1.22e-14,3;UBERON:0001168,1.22e-14,3;UBERON:0002108,4.05e-11,4;UBERON:0001962,1.99e-10,2;UBERON:0001961,1.99e-10,2;UBERON:0001744,1.99e-10,2;UBERON:0002465,3.14e-07,3;UBERON:0001007,8.55e-07,116;UBERON:0001555,8.55e-07,116;UBERON:0007026,8.55e-07,116 | |||
|phase1_expression=0,19.8915982354436,20.9299650119187,12.40103266358,21.0376206577466,1.51091344720701,2.10251376535973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.99981056983517,9.63518980482114,9.76194338995534,11.1998119001359,9.26526300549323,7.41091335879858,8.31699428207772,2.88249663851896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,1.1418387971906,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,1.27728527604296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.31293148088659,6.08236303326152,0,0,0,0.201683524623343,0,0,2.37264530772256,0.494096864172033,0,0.198956472041151,0.38992817423824,0,0.864552199498777,0.995706366271836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.395287777946524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0.342869252385415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,19.8915982354436,20.9299650119187,12.40103266358,21.0376206577466,1.51091344720701,2.10251376535973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.99981056983517,9.63518980482114,9.76194338995534,11.1998119001359,9.26526300549323,7.41091335879858,8.31699428207772,2.88249663851896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,1.1418387971906,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,1.27728527604296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.31293148088659,6.08236303326152,0,0,0,0.201683524623343,0,0,2.37264530772256,0.494096864172033,0,0.198956472041151,0.38992817423824,0,0.864552199498777,0.995706366271836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.395287777946524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0.342869252385415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p7@Src | |||
}} | }} |
Latest revision as of 00:45, 26 September 2015
Short description: | p7@Src |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Src_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | -138bp_to_ENSMUST00000109529_5end |
EntrezGene: | Src |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.27e-28 | 6 |
gut absorptive cell | 1.27e-28 | 6 |
enterocyte | 1.27e-28 | 6 |
columnar/cuboidal epithelial cell | 1.74e-24 | 7 |
intestinal epithelial cell | 5.82e-19 | 9 |
epithelial cell of alimentary canal | 5.82e-19 | 9 |
M cell of gut | 2.98e-15 | 3 |
epithelial cell | 1.67e-14 | 25 |
endo-epithelial cell | 3.34e-11 | 15 |
endodermal cell | 2.79e-08 | 20 |
defensive cell | 8.30e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.14e-43 | 15 |
intestinal mucosa | 4.52e-35 | 13 |
wall of intestine | 4.52e-35 | 13 |
gastrointestinal system mucosa | 4.52e-35 | 13 |
organ component layer | 1.19e-26 | 24 |
intestine | 1.34e-23 | 31 |
epithelium of mucosa | 5.82e-19 | 9 |
gastrointestinal system epithelium | 5.82e-19 | 9 |
intestinal epithelium | 5.82e-19 | 9 |
simple columnar epithelium | 1.94e-15 | 11 |
gastrointestinal system | 6.82e-15 | 47 |
ileal mucosa | 1.22e-14 | 3 |
ileum | 1.22e-14 | 3 |
mucosa of small intestine | 1.22e-14 | 3 |
wall of small intestine | 1.22e-14 | 3 |
small intestine | 4.05e-11 | 4 |
gut-associated lymphoid tissue | 1.99e-10 | 2 |
mucosa-associated lymphoid tissue | 1.99e-10 | 2 |
lymphoid tissue | 1.99e-10 | 2 |
lymphoid system | 3.14e-07 | 3 |
digestive system | 8.55e-07 | 116 |
digestive tract | 8.55e-07 | 116 |
primitive gut | 8.55e-07 | 116 |