FFCP PHASE1:Mm9::chr7:139768055..139768075,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=18242 | |EntrezGene=18242 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=P29758,Q3TG75,Q3UKT3 | |UniProt=P29758,Q3TG75,Q3UKT3 | ||
|association_with_transcript=5bp_to_ENSMUST00000084500,NM_016978,uc009kcb.1_5end | |association_with_transcript=5bp_to_ENSMUST00000084500,NM_016978,uc009kcb.1_5end | ||
|cluster_id=chr7:139768055..139768075,- | |||
|description=CAGE_peak_2_at_Oat_5end | |description=CAGE_peak_2_at_Oat_5end | ||
|id=chr7:139768055..139768075,- | |id=chr7:139768055..139768075,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!3.72e-09!23;UBERON:0001009!3.72e-09!23;UBERON:0004872!7.12e-08!33;UBERON:0007100!8.00e-08!18;UBERON:0000948!8.00e-08!18;UBERON:0005498!8.00e-08!18;UBERON:0004140!8.00e-08!18;UBERON:0009881!8.00e-08!18;UBERON:0004141!8.00e-08!18;UBERON:0003084!8.00e-08!18;UBERON:0007005!8.00e-08!18;UBERON:0004139!8.00e-08!18;UBERON:0004291!8.00e-08!18;UBERON:0003103!1.31e-07!43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004535,3.72e-09,23;UBERON:0001009,3.72e-09,23;UBERON:0004872,7.12e-08,33;UBERON:0007100,8.00e-08,18;UBERON:0000948,8.00e-08,18;UBERON:0005498,8.00e-08,18;UBERON:0004140,8.00e-08,18;UBERON:0009881,8.00e-08,18;UBERON:0004141,8.00e-08,18;UBERON:0003084,8.00e-08,18;UBERON:0007005,8.00e-08,18;UBERON:0004139,8.00e-08,18;UBERON:0004291,8.00e-08,18;UBERON:0003103,1.31e-07,43 | |||
|phase1_expression=12.9720566154883,7.32848356042658,6.82498859084304,3.93203474698879,3.00537437967808,4.19698179779725,9.57811826441655,7.36002943616985,3.09735188733667,2.57470978954193,6.8487187290202,5.18519033469687,5.9920255475922,7.86783621770977,5.99597571268193,9.51633756732182,11.8925519281785,5.0473946457318,7.67840828192137,2.54633791078818,10.0351082378262,8.63831275447702,6.52999472847338,9.91953021319121,7.34109699414944,8.03924749761028,7.75371593086335,8.40337807474967,10.4512880701006,6.30075324399827,9.09095093686749,8.89042942843484,5.53558308826113,0,3.17736781726402,2.65975432573588,3.87921776898501,9.62622750694888,7.813353445238,12.0410461113974,2.35292595212406,2.04913645487534,5.82612423637384,49.3515526464263,47.0388960858548,31.7535881239709,13.3006528539167,5.01457859675027,15.5977189741475,13.9989527333484,18.8981669194239,10.062679505548,7.71799987865587,5.80289713609076,3.6970317905671,35.2445427369247,36.6762803121609,30.9403255366465,6.67644320836673,6.87688273053643,6.97214543856797,18.2976047317331,19.5644855144451,10.7987966073768,15.8218618010716,7.8152812644071,7.49000276296012,2.30530983192933,6.11768712620018,6.75029691658453,7.78202357000113,10.8547374073445,9.93908434282261,6.73699395682247,4.2172007248024,7.35375029288017,16.5173821499083,16.4716666129892,18.8936035905179,5.40733779693795,5.85520919055422,4.68822033501084,17.0301629390842,19.6966913511088,18.488587980994,11.490514833473,11.3897344639282,7.45597783301202,10.4502146799794,17.9104597453082,4.92769630792852,9.46466264679525,3.39985666853875,4.31762553310254,3.24888208723835,2.68816132258401,13.4826643326482,28.6322941931137,34.2917526075787,23.6737514921928,10.2815696436977,24.3820307087204,2.54805239706646,21.3320010945999,15.8038459938186,13.4280728701802,11.62706223534,9.93399753555822,7.50919862576798,23.8991843894368,16.654591369549,14.6143429589828,18.4492397804847,19.1417753501831,17.7558947774914,18.7243221081216,13.3485282576562,23.1358971071859,9.73071607144862,15.8531512948461,8.39197770149496,16.0008833534623,24.2309289583559,12.0040126774734,13.1951425292477,7.40825460104915,10.3041007075091,6.59893004092748,12.0716715719411,18.8736205650077,10.5225138648284,11.0575829859321,18.0777292999968,14.3200656104985,14.9607392082883,18.0087802005211,26.3763952372319,13.31154585528,16.1742565397552,8.41767423545896,8.71806967850115,11.9549094305406,9.90341713929421,11.4535661555143,8.84474488967262,12.4270308676304,9.27647073141315,8.2785078636485,9.26942369611222,8.88798576788751,10.0292140773451,13.5901354105096,15.2925987074079,18.1091126591527,22.0186885956499,10.5488161413801,9.83098462238529,7.72043721344146,9.37739548005456,13.8774267598786,12.6644072389792,19.9868888221726,15.3884078130387,15.3476100762975,18.0492522078233,17.2075119115302,20.6570519077707,19.4998121753173,17.4433440908289,20.0284306176496,15.6462802423502,17.6901984784652,25.0287131431798,24.4255682143877,16.1923260394378,11.216602749342,5.28670052774077,6.87571473325215,7.89166526980366,14.1664369834868,11.2114691350221,8.87407508342707,9.33987784148455,9.51128130562796,10.4396393539793,11.8583247401288,13.5721012752146,14.7227789310452,11.5028811400281,7.19055526923377,6.70027954611552,8.16479220342906,10.6214024533726,12.1103423366313,7.88954149711563,13.4409876377907,11.6371492300575,8.97738494596078,13.7855650930881,15.4990655378582,17.4268587903926,14.4374681788507,4.44678940630723,7.84171996865642,7.66580080941492,7.42044970870017,11.1573066763677,8.68237775108701,7.38414970166117,4.60313819921297,7.13394997810156,7.13859674289012,7.18841032636773,9.67566463938109,6.55279113540577,4.79899868099512,8.96987067609561,8.20153986317724,18.8448253969937,10.9905018826881,14.6668478797823,14.2585872051158,15.4895563870411,12.0604505358107,11.4260947625287,9.17128144931655,16.3940549870439,20.8176808269848,15.6265673284337,18.0249646187312,18.4772930596508,17.5025360883629,15.0791283939272,28.8270012423916,10.8188140064188,10.4855963595798,18.7844190285717,17.6989646754227,14.9180800292775,21.2075578851673,8.51872192423893,7.02789739733949,7.53981892064796,7.88597033243422,7.5751549188014,7.35998980050964,5.66734982344852,8.76767573733936,7.11518000303742,9.96096080907602,15.6134093729095,21.3678724400706,23.455722146915,10.8880281161873,7.96470830039777,9.46844481004428,9.67435382287203,14.8998013007159,12.6979813938732,17.5238034328039,11.62927319257,11.6330793432802,14.9728898921583,19.5942789920206,13.7044191147498,9.28219889233682,23.4903327970114,8.64293251350289,8.27895576209629,9.00215547132688,8.51233121482913,12.4858172321449,14.6448628335888,14.9187825066154,17.6003781047783,10.591603543191,25.3607657763206,6.76033637060068,13.724476269152,16.0432380308895,14.9215430003921,10.1767357841938,11.0762717919343,15.3903000668723,8.03093139749908,10.7321171340876,14.8155621895769,10.360265135258,10.66214976224,9.15112692826091,6.62915876976036,7.55737842547753,7.32459861163446,14.3200592702267,8.54107182669065,15.6555989687673,16.7408278273792,20.4906530094179,17.4690050996942,21.5782954215713,18.7623344496513,17.0141362289619,16.3314866347659,30.4456263412594,7.89170114157866,11.0642244072544,15.8840150838814,15.7505462558679,19.6322931686151,16.3887441726055,16.3126561717598,10.8069639420479,12.1636839533825,8.21386010808421,7.20075015644664,8.21628913633263,13.7853146397312,12.0171819882848,9.09445760844565,8.41425469637163,8.14593554603186,6.73094517311826,6.79371825003055,6.86571859647404,7.62068066549998,5.84791873793675,4.77543615624787,4.32953287381483,5.02570679380746,16.3245876202952,5.77163478772568,5.11368982674011,4.86865387455827,17.5802530569293,22.709579529593,12.8206136987086,7.71726164684637,26.0817494098389,11.2950368523413,21.6352861158373,17.7597609166213,12.2015759464018,17.1270629942661,12.0863023582352,17.550585006027,18.0128481289688,23.1102628581944,13.4617681055473,9.96358536808096,15.9609949360412,12.6342868258059,10.2104821168684,10.2710449687711,9.74370594785075,11.7790765734856,12.7741735488114,15.4041220604071,10.8659801058433,11.1530891951705,11.5062068245506,10.6751318515666,11.5885525852813,9.9363361293211,13.8125170472091,8.80720877180902,9.45255180272155,12.7746629249025,12.5119082114238,16.1148548621145,12.7782580434723,12.3986818772607,13.3718703301742,11.7636725519163,10.7460552022429,8.23175877927476,15.2580432633949,10.1853085384396,10.1005608898393,9.37216643180976,10.835493061312,8.18462086339379,9.14127362997199,11.7673032698496,12.2407183189594,16.8430758080694,17.6194264319605,17.0246615541271,22.5003247501906,19.4768981921154 | |phase1_expression=12.9720566154883,7.32848356042658,6.82498859084304,3.93203474698879,3.00537437967808,4.19698179779725,9.57811826441655,7.36002943616985,3.09735188733667,2.57470978954193,6.8487187290202,5.18519033469687,5.9920255475922,7.86783621770977,5.99597571268193,9.51633756732182,11.8925519281785,5.0473946457318,7.67840828192137,2.54633791078818,10.0351082378262,8.63831275447702,6.52999472847338,9.91953021319121,7.34109699414944,8.03924749761028,7.75371593086335,8.40337807474967,10.4512880701006,6.30075324399827,9.09095093686749,8.89042942843484,5.53558308826113,0,3.17736781726402,2.65975432573588,3.87921776898501,9.62622750694888,7.813353445238,12.0410461113974,2.35292595212406,2.04913645487534,5.82612423637384,49.3515526464263,47.0388960858548,31.7535881239709,13.3006528539167,5.01457859675027,15.5977189741475,13.9989527333484,18.8981669194239,10.062679505548,7.71799987865587,5.80289713609076,3.6970317905671,35.2445427369247,36.6762803121609,30.9403255366465,6.67644320836673,6.87688273053643,6.97214543856797,18.2976047317331,19.5644855144451,10.7987966073768,15.8218618010716,7.8152812644071,7.49000276296012,2.30530983192933,6.11768712620018,6.75029691658453,7.78202357000113,10.8547374073445,9.93908434282261,6.73699395682247,4.2172007248024,7.35375029288017,16.5173821499083,16.4716666129892,18.8936035905179,5.40733779693795,5.85520919055422,4.68822033501084,17.0301629390842,19.6966913511088,18.488587980994,11.490514833473,11.3897344639282,7.45597783301202,10.4502146799794,17.9104597453082,4.92769630792852,9.46466264679525,3.39985666853875,4.31762553310254,3.24888208723835,2.68816132258401,13.4826643326482,28.6322941931137,34.2917526075787,23.6737514921928,10.2815696436977,24.3820307087204,2.54805239706646,21.3320010945999,15.8038459938186,13.4280728701802,11.62706223534,9.93399753555822,7.50919862576798,23.8991843894368,16.654591369549,14.6143429589828,18.4492397804847,19.1417753501831,17.7558947774914,18.7243221081216,13.3485282576562,23.1358971071859,9.73071607144862,15.8531512948461,8.39197770149496,16.0008833534623,24.2309289583559,12.0040126774734,13.1951425292477,7.40825460104915,10.3041007075091,6.59893004092748,12.0716715719411,18.8736205650077,10.5225138648284,11.0575829859321,18.0777292999968,14.3200656104985,14.9607392082883,18.0087802005211,26.3763952372319,13.31154585528,16.1742565397552,8.41767423545896,8.71806967850115,11.9549094305406,9.90341713929421,11.4535661555143,8.84474488967262,12.4270308676304,9.27647073141315,8.2785078636485,9.26942369611222,8.88798576788751,10.0292140773451,13.5901354105096,15.2925987074079,18.1091126591527,22.0186885956499,10.5488161413801,9.83098462238529,7.72043721344146,9.37739548005456,13.8774267598786,12.6644072389792,19.9868888221726,15.3884078130387,15.3476100762975,18.0492522078233,17.2075119115302,20.6570519077707,19.4998121753173,17.4433440908289,20.0284306176496,15.6462802423502,17.6901984784652,25.0287131431798,24.4255682143877,16.1923260394378,11.216602749342,5.28670052774077,6.87571473325215,7.89166526980366,14.1664369834868,11.2114691350221,8.87407508342707,9.33987784148455,9.51128130562796,10.4396393539793,11.8583247401288,13.5721012752146,14.7227789310452,11.5028811400281,7.19055526923377,6.70027954611552,8.16479220342906,10.6214024533726,12.1103423366313,7.88954149711563,13.4409876377907,11.6371492300575,8.97738494596078,13.7855650930881,15.4990655378582,17.4268587903926,14.4374681788507,4.44678940630723,7.84171996865642,7.66580080941492,7.42044970870017,11.1573066763677,8.68237775108701,7.38414970166117,4.60313819921297,7.13394997810156,7.13859674289012,7.18841032636773,9.67566463938109,6.55279113540577,4.79899868099512,8.96987067609561,8.20153986317724,18.8448253969937,10.9905018826881,14.6668478797823,14.2585872051158,15.4895563870411,12.0604505358107,11.4260947625287,9.17128144931655,16.3940549870439,20.8176808269848,15.6265673284337,18.0249646187312,18.4772930596508,17.5025360883629,15.0791283939272,28.8270012423916,10.8188140064188,10.4855963595798,18.7844190285717,17.6989646754227,14.9180800292775,21.2075578851673,8.51872192423893,7.02789739733949,7.53981892064796,7.88597033243422,7.5751549188014,7.35998980050964,5.66734982344852,8.76767573733936,7.11518000303742,9.96096080907602,15.6134093729095,21.3678724400706,23.455722146915,10.8880281161873,7.96470830039777,9.46844481004428,9.67435382287203,14.8998013007159,12.6979813938732,17.5238034328039,11.62927319257,11.6330793432802,14.9728898921583,19.5942789920206,13.7044191147498,9.28219889233682,23.4903327970114,8.64293251350289,8.27895576209629,9.00215547132688,8.51233121482913,12.4858172321449,14.6448628335888,14.9187825066154,17.6003781047783,10.591603543191,25.3607657763206,6.76033637060068,13.724476269152,16.0432380308895,14.9215430003921,10.1767357841938,11.0762717919343,15.3903000668723,8.03093139749908,10.7321171340876,14.8155621895769,10.360265135258,10.66214976224,9.15112692826091,6.62915876976036,7.55737842547753,7.32459861163446,14.3200592702267,8.54107182669065,15.6555989687673,16.7408278273792,20.4906530094179,17.4690050996942,21.5782954215713,18.7623344496513,17.0141362289619,16.3314866347659,30.4456263412594,7.89170114157866,11.0642244072544,15.8840150838814,15.7505462558679,19.6322931686151,16.3887441726055,16.3126561717598,10.8069639420479,12.1636839533825,8.21386010808421,7.20075015644664,8.21628913633263,13.7853146397312,12.0171819882848,9.09445760844565,8.41425469637163,8.14593554603186,6.73094517311826,6.79371825003055,6.86571859647404,7.62068066549998,5.84791873793675,4.77543615624787,4.32953287381483,5.02570679380746,16.3245876202952,5.77163478772568,5.11368982674011,4.86865387455827,17.5802530569293,22.709579529593,12.8206136987086,7.71726164684637,26.0817494098389,11.2950368523413,21.6352861158373,17.7597609166213,12.2015759464018,17.1270629942661,12.0863023582352,17.550585006027,18.0128481289688,23.1102628581944,13.4617681055473,9.96358536808096,15.9609949360412,12.6342868258059,10.2104821168684,10.2710449687711,9.74370594785075,11.7790765734856,12.7741735488114,15.4041220604071,10.8659801058433,11.1530891951705,11.5062068245506,10.6751318515666,11.5885525852813,9.9363361293211,13.8125170472091,8.80720877180902,9.45255180272155,12.7746629249025,12.5119082114238,16.1148548621145,12.7782580434723,12.3986818772607,13.3718703301742,11.7636725519163,10.7460552022429,8.23175877927476,15.2580432633949,10.1853085384396,10.1005608898393,9.37216643180976,10.835493061312,8.18462086339379,9.14127362997199,11.7673032698496,12.2407183189594,16.8430758080694,17.6194264319605,17.0246615541271,22.5003247501906,19.4768981921154 | ||
|short_description=p2@Oat | |short_description=p2@Oat | ||
}} | }} |
Latest revision as of 01:01, 26 September 2015
Short description: | p2@Oat |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Oat_5end |
Coexpression cluster: | NA |
Association with transcript: | 5bp_to_ENSMUST00000084500, NM_016978, uc009kcb.1_5end |
EntrezGene: | Oat |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiovascular system | 3.72e-09 | 23 |
circulatory system | 3.72e-09 | 23 |
splanchnic layer of lateral plate mesoderm | 7.12e-08 | 33 |
primary circulatory organ | 8.00e-08 | 18 |
heart | 8.00e-08 | 18 |
primitive heart tube | 8.00e-08 | 18 |
primary heart field | 8.00e-08 | 18 |
anterior lateral plate mesoderm | 8.00e-08 | 18 |
heart tube | 8.00e-08 | 18 |
heart primordium | 8.00e-08 | 18 |
cardiac mesoderm | 8.00e-08 | 18 |
cardiogenic plate | 8.00e-08 | 18 |
heart rudiment | 8.00e-08 | 18 |
compound organ | 1.31e-07 | 43 |