FFCP PHASE1:Mm9::chr9:102408291..102408302,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=16716|HGNC=|UniProt=F8VQF8,Q8C8H8|association_with_transcript=-165bp_to_ENSMUST00000039390,NM_024291,uc009rfp.1_5end|description=CAGE_peak_3_at_Ky_5end|id=chr9:102408291..102408302,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0007100,6.71e-14,18;UBERON:0000948,6.71e-14,18;UBERON:0005498,6.71e-14,18;UBERON:0004140,6.71e-14,18;UBERON:0009881,6.71e-14,18;UBERON:0004141,6.71e-14,18;UBERON:0003084,6.71e-14,18;UBERON:0007005,6.71e-14,18;UBERON:0004139,6.71e-14,18;UBERON:0004291,6.71e-14,18;UBERON:0004535,6.48e-11,23;UBERON:0001009,6.48e-11,23;UBERON:0001723,8.99e-11,1;UBERON:0001033,8.99e-11,1;UBERON:0010056,8.99e-11,1;UBERON:0001374,1.12e-10,1;UBERON:0004252,1.12e-10,1;UBERON:0003663,1.12e-10,1;UBERON:0005090,1.12e-10,1;UBERON:0001630,1.12e-10,1;UBERON:0003661,1.12e-10,1;UBERON:0010890,1.12e-10,1;UBERON:0001383,1.12e-10,1;UBERON:0003103,3.42e-08,43;UBERON:0004872,1.23e-07,33|phase1_expression=0,0.348975407639361,0,0,0,1.34303417529512,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47997726838022,0,0,0.430761996159075,0.646413698057667,0,0.252030129759931,0.886922042621219,0,0,0,1.44425809875637,0.831173226792462,0.816677425049476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,0,0.255374676170375,0.614426133024974,0,0.0914876436024097,0,0.279182999001381,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0.117588707135705,0,0,0.144599356919912,0,0.808834249737046,0,0,0,0.292780797011547,0.209446706813455,0,0,0,0,0.299581278809645,0,0.125654352112864,0.173824320192276,0,0.20778804455956,0.162241263067758,0,0,0,0.210441855886474,0,0,0.360124259610698,0.60281927134286,0,0,0.187403449119458,0.258703370739016,0,0.189106080167819,0.175951124163949,0.657587197282725,0,0.348252166522167,0.411564272815887,0,0,0,0,0,0,0,0.710234206755631,0,0.771335564436891,1.39520366850245,0.268273401399619,0.116765342367169,0.329119699826961,1.31333971263276,2.26992666728396,1.75439984910399,2.19550115291051,0.671032093801859,0.210289948564127,0,0,0.528901133327089,0,0.232236671860439,0,0,0,0,0,0,0,0.198956472041151,0.19496408711912,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0.321101179975584,0,0,1.00988370881749,0,0,0,0.238968797952552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0.340439605753788,0,0.129358683782755,0,0.177340233642274,0.891844088010353,0,0,0,0,0,0.16488625294148,0,0.120625849856312,0.119372344003136,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165306911450672,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0.129920822977795,0.179026695667481,0,0,0,0,0,0.201652370273681,0,0,0,1.13365191807606,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0.171853182343688,0,0.755393897389701,0,0,0,0,0,0.399024873401031,0,0.486213434136588,0.209613162627982,0.367687016900028,0.222246727801615,0,0,0,0.50695859978048,0.188626341386076,0.280924522409647,0.384150914429216,0.17230640686684,0.476293691283074,0.579421629724277,0.578727661391115,0.824171801606613,0.147198920134397,0.342869252385415,0.177475806159338,0.953744759789284,0.290692833264657,0.376437521661322,0.169229215783353,0.182927972872773,0.789209134313529,0.543216455383447,0.561142271657738,0.237270036248348,0.197008964751127,0.409231043169689,0.619747364743864,0,0.249810577937946,0,0,0,0.661774257358546,0.695603506861264|short_description=p3@Ky}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=16716 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=F8VQF8,Q8C8H8 | |||
|association_with_transcript=-165bp_to_ENSMUST00000039390,NM_024291,uc009rfp.1_5end | |||
|cluster_id=chr9:102408291..102408302,+ | |||
|description=CAGE_peak_3_at_Ky_5end | |||
|id=chr9:102408291..102408302,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,6.71e-14,18;UBERON:0000948,6.71e-14,18;UBERON:0005498,6.71e-14,18;UBERON:0004140,6.71e-14,18;UBERON:0009881,6.71e-14,18;UBERON:0004141,6.71e-14,18;UBERON:0003084,6.71e-14,18;UBERON:0007005,6.71e-14,18;UBERON:0004139,6.71e-14,18;UBERON:0004291,6.71e-14,18;UBERON:0004535,6.48e-11,23;UBERON:0001009,6.48e-11,23;UBERON:0001723,8.99e-11,1;UBERON:0001033,8.99e-11,1;UBERON:0010056,8.99e-11,1;UBERON:0001374,1.12e-10,1;UBERON:0004252,1.12e-10,1;UBERON:0003663,1.12e-10,1;UBERON:0005090,1.12e-10,1;UBERON:0001630,1.12e-10,1;UBERON:0003661,1.12e-10,1;UBERON:0010890,1.12e-10,1;UBERON:0001383,1.12e-10,1;UBERON:0003103,3.42e-08,43;UBERON:0004872,1.23e-07,33 | |||
|phase1_expression=0,0.348975407639361,0,0,0,1.34303417529512,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47997726838022,0,0,0.430761996159075,0.646413698057667,0,0.252030129759931,0.886922042621219,0,0,0,1.44425809875637,0.831173226792462,0.816677425049476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,0,0.255374676170375,0.614426133024974,0,0.0914876436024097,0,0.279182999001381,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0.117588707135705,0,0,0.144599356919912,0,0.808834249737046,0,0,0,0.292780797011547,0.209446706813455,0,0,0,0,0.299581278809645,0,0.125654352112864,0.173824320192276,0,0.20778804455956,0.162241263067758,0,0,0,0.210441855886474,0,0,0.360124259610698,0.60281927134286,0,0,0.187403449119458,0.258703370739016,0,0.189106080167819,0.175951124163949,0.657587197282725,0,0.348252166522167,0.411564272815887,0,0,0,0,0,0,0,0.710234206755631,0,0.771335564436891,1.39520366850245,0.268273401399619,0.116765342367169,0.329119699826961,1.31333971263276,2.26992666728396,1.75439984910399,2.19550115291051,0.671032093801859,0.210289948564127,0,0,0.528901133327089,0,0.232236671860439,0,0,0,0,0,0,0,0.198956472041151,0.19496408711912,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0.321101179975584,0,0,1.00988370881749,0,0,0,0.238968797952552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0.340439605753788,0,0.129358683782755,0,0.177340233642274,0.891844088010353,0,0,0,0,0,0.16488625294148,0,0.120625849856312,0.119372344003136,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165306911450672,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0.129920822977795,0.179026695667481,0,0,0,0,0,0.201652370273681,0,0,0,1.13365191807606,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0.171853182343688,0,0.755393897389701,0,0,0,0,0,0.399024873401031,0,0.486213434136588,0.209613162627982,0.367687016900028,0.222246727801615,0,0,0,0.50695859978048,0.188626341386076,0.280924522409647,0.384150914429216,0.17230640686684,0.476293691283074,0.579421629724277,0.578727661391115,0.824171801606613,0.147198920134397,0.342869252385415,0.177475806159338,0.953744759789284,0.290692833264657,0.376437521661322,0.169229215783353,0.182927972872773,0.789209134313529,0.543216455383447,0.561142271657738,0.237270036248348,0.197008964751127,0.409231043169689,0.619747364743864,0,0.249810577937946,0,0,0,0.661774257358546,0.695603506861264 | |||
|short_description=p3@Ky | |||
}} |
Latest revision as of 01:34, 26 September 2015
Short description: | p3@Ky |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Ky_5end |
Coexpression cluster: | NA |
Association with transcript: | -165bp_to_ENSMUST00000039390, NM_024291, uc009rfp.1_5end |
EntrezGene: | Ky |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
0.0
0.5
1.0
1.5
2.0
2.5
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data