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FFCP PHASE1:Mm9::chr2:163372884..163372904,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=15378
|EntrezGene=15378
|HGNC=
|HGNC=
|MCL_coexpression_id=810
|MCL_coexpression_id=810
|TSSclassifier=NA
|UniProt=P49698
|UniProt=P49698
|association_with_transcript=-18bp_to_ENSMUST00000109411_5end
|association_with_transcript=-18bp_to_ENSMUST00000109411_5end
|cluster_id=chr2:163372884..163372904,+
|description=CAGE_peak_1_at_Hnf4a_5end
|description=CAGE_peak_1_at_Hnf4a_5end
|id=chr2:163372884..163372904,+
|id=chr2:163372884..163372904,+
|ontology_enrichment_celltype=CL:0002563!1.20e-07!9;CL:0002251!1.20e-07!9
|ontology_enrichment_celltype=CL:0002563!1.20e-07!9;CL:0002251!1.20e-07!9
|ontology_enrichment_celltype_v019_2=CL:0002563,1.60e-08,9;CL:0002251,1.60e-08,9;CL:0000066,4.13e-07,25
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0005172!5.55e-16!49;UBERON:0005173!5.55e-16!49;UBERON:0002417!5.55e-16!49;UBERON:0000916!5.55e-16!49;UBERON:0000160!1.00e-15!43;UBERON:0005409!7.81e-15!59;UBERON:0009854!1.03e-14!23;UBERON:0009856!1.03e-14!23;UBERON:0002107!3.28e-14!22;UBERON:0007499!3.28e-14!22;UBERON:0006925!3.28e-14!22;UBERON:0009497!3.28e-14!22;UBERON:0000015!3.28e-14!22;UBERON:0002423!3.28e-14!22;UBERON:0006235!3.28e-14!22;UBERON:0008835!3.28e-14!22;UBERON:0003894!3.28e-14!22;UBERON:0004161!3.28e-14!22;UBERON:0008836!3.28e-14!22;UBERON:0004119!3.37e-12!130;UBERON:0000925!3.37e-12!130;UBERON:0006595!3.37e-12!130;UBERON:0000344!5.24e-12!15;UBERON:0001007!1.06e-11!128;UBERON:0001555!1.06e-11!128;UBERON:0007026!1.06e-11!128;UBERON:0002365!2.35e-11!25;UBERON:0002330!2.35e-11!25;UBERON:0004921!9.39e-11!126;UBERON:0004185!9.39e-11!126;UBERON:0001242!9.83e-11!13;UBERON:0000060!9.83e-11!13;UBERON:0001262!9.83e-11!13;UBERON:0004786!9.83e-11!13;UBERON:0009569!6.88e-09!66;UBERON:0004923!8.24e-09!24;UBERON:0003350!1.20e-07!9;UBERON:0004808!1.20e-07!9;UBERON:0001277!1.20e-07!9;UBERON:0005256!6.98e-07!47;UBERON:0005177!8.34e-07!85
|ontology_enrichment_uberon=UBERON:0005172!5.55e-16!49;UBERON:0005173!5.55e-16!49;UBERON:0002417!5.55e-16!49;UBERON:0000916!5.55e-16!49;UBERON:0000160!1.00e-15!43;UBERON:0005409!7.81e-15!59;UBERON:0009854!1.03e-14!23;UBERON:0009856!1.03e-14!23;UBERON:0002107!3.28e-14!22;UBERON:0007499!3.28e-14!22;UBERON:0006925!3.28e-14!22;UBERON:0009497!3.28e-14!22;UBERON:0000015!3.28e-14!22;UBERON:0002423!3.28e-14!22;UBERON:0006235!3.28e-14!22;UBERON:0008835!3.28e-14!22;UBERON:0003894!3.28e-14!22;UBERON:0004161!3.28e-14!22;UBERON:0008836!3.28e-14!22;UBERON:0004119!3.37e-12!130;UBERON:0000925!3.37e-12!130;UBERON:0006595!3.37e-12!130;UBERON:0000344!5.24e-12!15;UBERON:0001007!1.06e-11!128;UBERON:0001555!1.06e-11!128;UBERON:0007026!1.06e-11!128;UBERON:0002365!2.35e-11!25;UBERON:0002330!2.35e-11!25;UBERON:0004921!9.39e-11!126;UBERON:0004185!9.39e-11!126;UBERON:0001242!9.83e-11!13;UBERON:0000060!9.83e-11!13;UBERON:0001262!9.83e-11!13;UBERON:0004786!9.83e-11!13;UBERON:0009569!6.88e-09!66;UBERON:0004923!8.24e-09!24;UBERON:0003350!1.20e-07!9;UBERON:0004808!1.20e-07!9;UBERON:0001277!1.20e-07!9;UBERON:0005256!6.98e-07!47;UBERON:0005177!8.34e-07!85
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.90e-21,31;UBERON:0009854,1.53e-15,23;UBERON:0009856,1.53e-15,23;UBERON:0005409,3.55e-15,47;UBERON:0002107,5.78e-15,22;UBERON:0007499,5.78e-15,22;UBERON:0006925,5.78e-15,22;UBERON:0009497,5.78e-15,22;UBERON:0000015,5.78e-15,22;UBERON:0002423,5.78e-15,22;UBERON:0006235,5.78e-15,22;UBERON:0008835,5.78e-15,22;UBERON:0003894,5.78e-15,22;UBERON:0004161,5.78e-15,22;UBERON:0008836,5.78e-15,22;UBERON:0005172,1.12e-13,49;UBERON:0005173,1.12e-13,49;UBERON:0002417,1.12e-13,49;UBERON:0000916,1.12e-13,49;UBERON:0000344,1.68e-13,15;UBERON:0002365,3.42e-12,25;UBERON:0002330,3.42e-12,25;UBERON:0001242,4.80e-12,13;UBERON:0001262,4.80e-12,13;UBERON:0004786,4.80e-12,13;UBERON:0004119,1.03e-11,118;UBERON:0000925,1.03e-11,118;UBERON:0006595,1.03e-11,118;UBERON:0001007,3.43e-11,116;UBERON:0001555,3.43e-11,116;UBERON:0007026,3.43e-11,116;UBERON:0004921,3.47e-10,114;UBERON:0004923,6.15e-09,24;UBERON:0003104,1.19e-08,61;UBERON:0009142,1.19e-08,61;UBERON:0003350,1.60e-08,9;UBERON:0004808,1.60e-08,9;UBERON:0001277,1.60e-08,9;UBERON:0003929,1.06e-07,55;UBERON:0009569,3.53e-07,66
|phase1_expression=0,376.544464842871,309.854482024274,126.127576114948,143.256178764655,73.6990003693196,46.9561407597007,0,0,0,0,0,0,0,0,0,0,0,0,0,9.69493507722195,0,0,71.8365978342396,75.7050627521661,215.911218507248,118.459548943746,159.448712187558,119.334707418603,173.144699145072,70.7320328990422,0,0,0,39.2838202861733,49.7041589621892,43.0797341713599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.869593466105033,34.4169550792555,39.4383373550495,167.847692599361,107.862885296313,81.5408934517151,31.0382168491172,0,0,0,0,0,0,0,0,0,0,100.253446393335,0,0.445326417194474,1.04091196059682,1.52232739156071,2.99800146432876,1.05505848386836,1.88141931417128,0.879666139307728,15.3260879995312,0,0,0,0,0,26.0948465705371,0,0,95.2854815928046,0,0,0,0,0,0,0,0,0,0,1.12023300235348,0.248813941220186,0.758168275301024,0,0,0,0,1.20563854268572,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0.59710280045548,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,159.922690964158,77.2195654657549,0.426576501070468,0.928946687441754,14.0465532841082,25.6138076271645,24.6839628667806,45.6541502670142,115.785091016861,37.5513616770745,64.5931486616693,62.4723322209214,65.8978614462626,94.3760379086933,83.6454253015067,84.4358998598517,3.22435431620239,7.65465034485183,7.88954149711563,10.5898690479563,18.6194387680921,25.9502533594179,41.29345874214,97.570307814517,69.2364389780463,72.4341352220969,159.195060745799,7.17433954579204,9.23827277032054,10.3436571697033,14.2002084971952,20.7412357387078,29.7912246584261,31.0711828446875,93.0656201688703,47.22456306835,84.8232418511392,75.1724714290377,77.6973806055256,124.521386827926,95.4394239936573,173.197224169449,0,0,0,0.339490171550376,0,0,0.714130922658041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0,0,1.95872164033981,0.162886959353576,0,0,0.485561272309963,2.11626489875326,0.188605079755898,0,0,11.1124166062335,0.727067458955011,0.712994756769443,0,0,0,0,0,0,0,0,0,0,0,3.52007562095566,1.90648863777438,0,0,0,0,0,0,91.816463538403,0,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0.954670618015114,0.316335993581135,1.01659733563424,4.32021363287205,1.04544148007234,2.18362563746178,0.944050424693745,7.60411792673091,0,77.7689839750757,0,0,0,0,0,0.258319646955462,0,0,1.3020438484395,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415149390336707,0,1.19513524027894,3.40349403895612,6.28839487883947,8.64064489715066,3.77819437262746,5.56294654545014,2.56735367673452,4.80124702351215,2.28131369901216,3.01802146217722,6.9294715527713,6.01836432605771,7.40917549527411,4.76293691283074,6.72129090480162,7.13764115715709,7.82963211526283,4.26876868389752,5.14303878578123,4.43689515398344,8.10683045820891,4.0696996657052,5.36423468367385,5.92302255241735,5.85369513192872,4.47218509444333,6.3827933507555,1.68342681497322,5.33857581558784,7.88035859004508,2.86461730218783,5.57772628269478,5.01557188550968,0,4.44470056046276,8.80971321598023,0,0.661774257358546,0
|phase1_expression=0,376.544464842871,309.854482024274,126.127576114948,143.256178764655,73.6990003693196,46.9561407597007,0,0,0,0,0,0,0,0,0,0,0,0,0,9.69493507722195,0,0,71.8365978342396,75.7050627521661,215.911218507248,118.459548943746,159.448712187558,119.334707418603,173.144699145072,70.7320328990422,0,0,0,39.2838202861733,49.7041589621892,43.0797341713599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.869593466105033,34.4169550792555,39.4383373550495,167.847692599361,107.862885296313,81.5408934517151,31.0382168491172,0,0,0,0,0,0,0,0,0,0,100.253446393335,0,0.445326417194474,1.04091196059682,1.52232739156071,2.99800146432876,1.05505848386836,1.88141931417128,0.879666139307728,15.3260879995312,0,0,0,0,0,26.0948465705371,0,0,95.2854815928046,0,0,0,0,0,0,0,0,0,0,1.12023300235348,0.248813941220186,0.758168275301024,0,0,0,0,1.20563854268572,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0.59710280045548,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,159.922690964158,77.2195654657549,0.426576501070468,0.928946687441754,14.0465532841082,25.6138076271645,24.6839628667806,45.6541502670142,115.785091016861,37.5513616770745,64.5931486616693,62.4723322209214,65.8978614462626,94.3760379086933,83.6454253015067,84.4358998598517,3.22435431620239,7.65465034485183,7.88954149711563,10.5898690479563,18.6194387680921,25.9502533594179,41.29345874214,97.570307814517,69.2364389780463,72.4341352220969,159.195060745799,7.17433954579204,9.23827277032054,10.3436571697033,14.2002084971952,20.7412357387078,29.7912246584261,31.0711828446875,93.0656201688703,47.22456306835,84.8232418511392,75.1724714290377,77.6973806055256,124.521386827926,95.4394239936573,173.197224169449,0,0,0,0.339490171550376,0,0,0.714130922658041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0,0,1.95872164033981,0.162886959353576,0,0,0.485561272309963,2.11626489875326,0.188605079755898,0,0,11.1124166062335,0.727067458955011,0.712994756769443,0,0,0,0,0,0,0,0,0,0,0,3.52007562095566,1.90648863777438,0,0,0,0,0,0,91.816463538403,0,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0.954670618015114,0.316335993581135,1.01659733563424,4.32021363287205,1.04544148007234,2.18362563746178,0.944050424693745,7.60411792673091,0,77.7689839750757,0,0,0,0,0,0.258319646955462,0,0,1.3020438484395,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415149390336707,0,1.19513524027894,3.40349403895612,6.28839487883947,8.64064489715066,3.77819437262746,5.56294654545014,2.56735367673452,4.80124702351215,2.28131369901216,3.01802146217722,6.9294715527713,6.01836432605771,7.40917549527411,4.76293691283074,6.72129090480162,7.13764115715709,7.82963211526283,4.26876868389752,5.14303878578123,4.43689515398344,8.10683045820891,4.0696996657052,5.36423468367385,5.92302255241735,5.85369513192872,4.47218509444333,6.3827933507555,1.68342681497322,5.33857581558784,7.88035859004508,2.86461730218783,5.57772628269478,5.01557188550968,0,4.44470056046276,8.80971321598023,0,0.661774257358546,0
|short_description=p1@Hnf4a
|short_description=p1@Hnf4a
}}
}}

Latest revision as of 02:06, 26 September 2015

Short description:p1@Hnf4a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Hnf4a_5end
Coexpression cluster:MCL_coexpression_mm9:810
Association with transcript: -18bp_to_ENSMUST00000109411_5end
EntrezGene:Hnf4a
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Hnf4a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5376.54
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6309.85
CD326+ enterocyte, pool1.CNhs13542.11848-124I3126.13
CD326+ enterocyte, pool2.CNhs13197.11849-124I4143.26
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I773.70
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I846.96
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A39.69
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D171.84
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D275.71
GP2+ M cell, pool1.CNhs13228.11845-124H9215.91
GP2+ M cell, pool2.CNhs13231.11846-124I1118.46
GP2+ M cell, pool3.CNhs13240.11847-124I2159.45
Ileum epithelium, pool1.CNhs13199.10252-104B9119.33
Ileum epithelium, pool2.CNhs13232.10253-104C1173.14
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C870.73
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F539.28
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F649.70
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F743.08
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F734.42
Mouse hepatocyte, donor1.CNhs13078.11714-123C439.44
Mouse hepatocyte, donor3.CNhs12615.11637-122C8167.85
Mouse hepatocyte, donor6.CNhs13090.11822-124F4107.86
Mouse hepatocyte, donor8.CNhs13091.11824-124F681.54
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A731.04
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B6100.25
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C51.04
adrenal gland, embryo E16.CNhs11004.1254-43D61.52
adrenal gland, embryo E17.CNhs11043.1263-45I13.00
adrenal gland, embryo E18.CNhs11026.1262-18F51.06
adrenal gland, neonate N00.CNhs11191.1311-23C11.88
adrenal gland, neonate N25.CNhs11223.1377-27I30.88
amnion, adult pregnant day17.5.CNhs10488.583-22A815.33
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H426.09
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H795.29
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.12
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D41.21
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I3159.92
intestine, adult.CNhs10496.178-9A377.22
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D814.05
intestine, embryo E16.CNhs10585.463-22H425.61
intestine, embryo E17.CNhs10582.482-18D324.68
intestine, embryo E18.CNhs10526.1289-20F745.65
intestine, neonate N00.CNhs11126.644-26D1115.79
intestine, neonate N01.CNhs11192.1322-23E937.55
intestine, neonate N06.CNhs11102.688-20B864.59
intestine, neonate N07.CNhs11095.720-20F262.47
intestine, neonate N10.CNhs11098.755-23A565.90
intestine, neonate N20.CNhs11187.827-18D194.38
intestine, neonate N25.CNhs11121.1352-25E383.65
intestine, neonate N30.CNhs11131.1384-42G184.44
kidney, embryo E14.CNhs10606.411-4I93.22
kidney, embryo E15.CNhs10997.434-16F87.65
kidney, embryo E16.CNhs10584.464-22A57.89
kidney, embryo E17.CNhs11028.483-18I210.59
kidney, embryo E18.CNhs11001.1288-20C718.62
kidney, neonate N00.CNhs11214.646-21G725.95
kidney, neonate N10.CNhs11206.758-6D541.29
kidney, neonate N20.CNhs11113.832-19I197.57
kidney, neonate N25.CNhs11122.1353-25F369.24
kidney, neonate N30.CNhs11203.1385-42H172.43
liver, adult pregnant day01.CNhs10466.508-5B2159.20
liver, embryo E12.CNhs10601.355-15F87.17
liver, embryo E13.CNhs10524.378-3H69.24
liver, embryo E14.CNhs10594.409-16E110.34
liver, embryo E15.CNhs10520.433-16D714.20
liver, embryo E16.CNhs10523.462-17F520.74
liver, embryo E17.CNhs10510.481-18A329.79
liver, embryo E18.CNhs10579.499-43G431.07
liver, neonate N00.CNhs11117.641-24F493.07
liver, neonate N03.CNhs11123.1345-25G247.22
liver, neonate N06.CNhs11101.684-20A884.82
liver, neonate N07.CNhs11103.716-20H275.17
liver, neonate N10.CNhs11115.751-24B977.70
liver, neonate N20.CNhs11220.823-25A3124.52
liver, neonate N25.CNhs11198.1368-26H195.44
liver, neonate N30.CNhs11106.1382-42D1173.20
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H71.96
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F22.12
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G911.11
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I73.52
placenta, adult pregnant day17.CNhs10464.577-18G31.91
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I191.82
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D44.32
stomach, embryo E17.CNhs11006.1035-18D51.05
stomach, embryo E18.CNhs10999.1286-20C62.18
stomach, neonate N03.CNhs11193.1340-24B80.94
stomach, neonate N07.CNhs11210.718-18A97.60
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I177.77
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I41.30
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H21.20
whole body, embryo E14.5.CNhs10578.420-27D23.40
whole body, embryo E14.CNhs10519.395-14B16.29
whole body, embryo E16.CNhs10514.453-14F28.64
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G55.56
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.57
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G54.80
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.28
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.02
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G56.93
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G56.02
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G57.41
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.76
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G56.72
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G57.14
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G57.83
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G54.27
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G55.14
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.44
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G58.11
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G54.07
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G55.36
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G55.92
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G55.85
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G54.47
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G56.38
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G55.34
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G57.88
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G55.58
whole body, embryo E17.5.CNhs10513.490-9F95.02
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B34.44
whole body, neonate N00.CNhs10525.657-19C28.81
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
intestinal epithelial cell1.60e-089
epithelial cell of alimentary canal1.60e-089
epithelial cell4.13e-0725

Uber anatomy
Ontology termp-valuen
intestine3.90e-2131
digestive tract diverticulum1.53e-1523
sac1.53e-1523
gastrointestinal system3.55e-1547
liver5.78e-1522
epithelial sac5.78e-1522
digestive gland5.78e-1522
epithelium of foregut-midgut junction5.78e-1522
anatomical boundary5.78e-1522
hepatobiliary system5.78e-1522
foregut-midgut junction5.78e-1522
hepatic diverticulum5.78e-1522
liver primordium5.78e-1522
septum transversum5.78e-1522
liver bud5.78e-1522
abdomen element1.12e-1349
abdominal segment element1.12e-1349
abdominal segment of trunk1.12e-1349
abdomen1.12e-1349
mucosa1.68e-1315
exocrine gland3.42e-1225
exocrine system3.42e-1225
intestinal mucosa4.80e-1213
wall of intestine4.80e-1213
gastrointestinal system mucosa4.80e-1213
endoderm-derived structure1.03e-11118
endoderm1.03e-11118
presumptive endoderm1.03e-11118
digestive system3.43e-11116
digestive tract3.43e-11116
primitive gut3.43e-11116
subdivision of digestive tract3.47e-10114
organ component layer6.15e-0924
mesenchyme1.19e-0861
entire embryonic mesenchyme1.19e-0861
epithelium of mucosa1.60e-089
gastrointestinal system epithelium1.60e-089
intestinal epithelium1.60e-089
gut epithelium1.06e-0755
subdivision of trunk3.53e-0766
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