FFCP PHASE1:Mm9::chr17:26978449..26978458,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=18091 | |EntrezGene=18091 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=19 | |MCL_coexpression_id=19 | ||
|TSSclassifier=NA | |||
|UniProt=P42582,Q3UQU2 | |UniProt=P42582,Q3UQU2 | ||
|association_with_transcript=51bp_to_ENSMUST00000015723,NM_008700,uc008beo.1_5end | |association_with_transcript=51bp_to_ENSMUST00000015723,NM_008700,uc008beo.1_5end | ||
|cluster_id=chr17:26978449..26978458,- | |||
|description=CAGE_peak_3_at_Nkx2-5_5end | |description=CAGE_peak_3_at_Nkx2-5_5end | ||
|id=chr17:26978449..26978458,- | |id=chr17:26978449..26978458,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!1.46e-16!18;UBERON:0000948!1.46e-16!18;UBERON:0005498!1.46e-16!18;UBERON:0004140!1.46e-16!18;UBERON:0009881!1.46e-16!18;UBERON:0004141!1.46e-16!18;UBERON:0003084!1.46e-16!18;UBERON:0007005!1.46e-16!18;UBERON:0004139!1.46e-16!18;UBERON:0004291!1.46e-16!18;UBERON:0004872!7.35e-15!33;UBERON:0004535!7.64e-12!23;UBERON:0001009!7.64e-12!23;UBERON:0000945!1.21e-10!16;UBERON:0010039!1.21e-10!16;UBERON:0002106!5.86e-08!6;UBERON:0004457!5.86e-08!6;UBERON:0000042!5.86e-08!6;UBERON:0004854!5.86e-08!6;UBERON:0009034!5.86e-08!6;UBERON:0002095!5.86e-08!6;UBERON:0004782!5.86e-08!6;UBERON:0003281!5.86e-08!6;UBERON:0009664!5.86e-08!6;UBERON:0002296!5.86e-08!6;UBERON:0005602!5.86e-08!6;UBERON:0001179!5.86e-08!6;UBERON:0006293!5.86e-08!6 | |ontology_enrichment_uberon=UBERON:0007100!1.46e-16!18;UBERON:0000948!1.46e-16!18;UBERON:0005498!1.46e-16!18;UBERON:0004140!1.46e-16!18;UBERON:0009881!1.46e-16!18;UBERON:0004141!1.46e-16!18;UBERON:0003084!1.46e-16!18;UBERON:0007005!1.46e-16!18;UBERON:0004139!1.46e-16!18;UBERON:0004291!1.46e-16!18;UBERON:0004872!7.35e-15!33;UBERON:0004535!7.64e-12!23;UBERON:0001009!7.64e-12!23;UBERON:0000945!1.21e-10!16;UBERON:0010039!1.21e-10!16;UBERON:0002106!5.86e-08!6;UBERON:0004457!5.86e-08!6;UBERON:0000042!5.86e-08!6;UBERON:0004854!5.86e-08!6;UBERON:0009034!5.86e-08!6;UBERON:0002095!5.86e-08!6;UBERON:0004782!5.86e-08!6;UBERON:0003281!5.86e-08!6;UBERON:0009664!5.86e-08!6;UBERON:0002296!5.86e-08!6;UBERON:0005602!5.86e-08!6;UBERON:0001179!5.86e-08!6;UBERON:0006293!5.86e-08!6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,3.03e-57,18;UBERON:0000948,3.03e-57,18;UBERON:0005498,3.03e-57,18;UBERON:0004140,3.03e-57,18;UBERON:0009881,3.03e-57,18;UBERON:0004141,3.03e-57,18;UBERON:0003084,3.03e-57,18;UBERON:0007005,3.03e-57,18;UBERON:0004139,3.03e-57,18;UBERON:0004291,3.03e-57,18;UBERON:0004535,2.36e-44,23;UBERON:0001009,2.36e-44,23;UBERON:0004872,3.59e-39,33;UBERON:0003103,1.02e-22,43;UBERON:0003914,1.36e-20,47;UBERON:0003081,2.35e-13,87;UBERON:0010314,2.25e-09,92;UBERON:0000926,5.76e-09,120;UBERON:0004120,5.76e-09,120;UBERON:0006603,5.76e-09,120;UBERON:0001048,9.52e-08,134;UBERON:0000025,4.32e-07,114 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062129805349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.3562886267751,4.22146907965973,5.94204802821349,6.62885259638589,6.49321964766433,4.9365476123961,7.90615412151387,6.9751084363901,5.95503246072564,7.5697530960201,3.11918181750281,5.59374785866405,4.5321996101853,5.48875288227627,5.09984391289413,0,0,0,0,0.426576501070468,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0.196558995113203,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0.189491411770485,0.325929952884052,0.169745085775188,0.469380496577004,0.335012514883631,0.238043640886014,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,1.47541450839008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485561272309963,0,0.377210159511796,0.590603785761546,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512612642393558,5.77883230297023,4.25947412950337,0.753473828018764,0.27338845544205,0.457556346413045,0,0,0,0,0.632671987162271,0.406638934253697,0.324016022465404,0.209088296014469,0.218362563746178,0.404593039154462,0.330613822901344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0.453460767230423,0.665957860122194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.726511433089237,0,0.170733605754134,0.972426868273176,0.419226325255965,0.183843508450014,0.222246727801615,0.412070114477788,0,0.505394423527595,0.25347929989024,0.377252682772152,0.187283014939765,0.192075457214608,0.0574354689556133,0,0.231768651889711,0.578727661391115,0,0.147198920134397,0.342869252385415,0.354951612318675,0,0.145346416632329,0.188218760830661,0.25384382367503,0,0.263069711437843,0,0,0.237270036248348,0.394017929502254,0,0.154936841185966,0.192906610981141,1.74867404556562,0.233931608445408,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062129805349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.3562886267751,4.22146907965973,5.94204802821349,6.62885259638589,6.49321964766433,4.9365476123961,7.90615412151387,6.9751084363901,5.95503246072564,7.5697530960201,3.11918181750281,5.59374785866405,4.5321996101853,5.48875288227627,5.09984391289413,0,0,0,0,0.426576501070468,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0.196558995113203,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0.189491411770485,0.325929952884052,0.169745085775188,0.469380496577004,0.335012514883631,0.238043640886014,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,1.47541450839008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485561272309963,0,0.377210159511796,0.590603785761546,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512612642393558,5.77883230297023,4.25947412950337,0.753473828018764,0.27338845544205,0.457556346413045,0,0,0,0,0.632671987162271,0.406638934253697,0.324016022465404,0.209088296014469,0.218362563746178,0.404593039154462,0.330613822901344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0.453460767230423,0.665957860122194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.726511433089237,0,0.170733605754134,0.972426868273176,0.419226325255965,0.183843508450014,0.222246727801615,0.412070114477788,0,0.505394423527595,0.25347929989024,0.377252682772152,0.187283014939765,0.192075457214608,0.0574354689556133,0,0.231768651889711,0.578727661391115,0,0.147198920134397,0.342869252385415,0.354951612318675,0,0.145346416632329,0.188218760830661,0.25384382367503,0,0.263069711437843,0,0,0.237270036248348,0.394017929502254,0,0.154936841185966,0.192906610981141,1.74867404556562,0.233931608445408,0,0,0,0 | ||
|short_description=p3@Nkx2-5 | |short_description=p3@Nkx2-5 | ||
}} | }} |
Latest revision as of 03:11, 26 September 2015
Short description: | p3@Nkx2-5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Nkx2-5_5end |
Coexpression cluster: | MCL_coexpression_mm9:19 |
Association with transcript: | 51bp_to_ENSMUST00000015723, NM_008700, uc008beo.1_5end |
EntrezGene: | Nkx2-5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 3.03e-57 | 18 |
heart | 3.03e-57 | 18 |
primitive heart tube | 3.03e-57 | 18 |
primary heart field | 3.03e-57 | 18 |
anterior lateral plate mesoderm | 3.03e-57 | 18 |
heart tube | 3.03e-57 | 18 |
heart primordium | 3.03e-57 | 18 |
cardiac mesoderm | 3.03e-57 | 18 |
cardiogenic plate | 3.03e-57 | 18 |
heart rudiment | 3.03e-57 | 18 |
cardiovascular system | 2.36e-44 | 23 |
circulatory system | 2.36e-44 | 23 |
splanchnic layer of lateral plate mesoderm | 3.59e-39 | 33 |
compound organ | 1.02e-22 | 43 |
epithelial tube | 1.36e-20 | 47 |
lateral plate mesoderm | 2.35e-13 | 87 |
structure with developmental contribution from neural crest | 2.25e-09 | 92 |
mesoderm | 5.76e-09 | 120 |
mesoderm-derived structure | 5.76e-09 | 120 |
presumptive mesoderm | 5.76e-09 | 120 |
primordium | 9.52e-08 | 134 |
tube | 4.32e-07 | 114 |