FFCP PHASE1:Mm9::chr4:107596084..107596100,-: Difference between revisions
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{{FFCP|EntrezGene=12896|HGNC=|MCL_coexpression_id=1455|UniProt=|association_with_transcript=-32bp_to_ENSMUST00000141738_5end|description=CAGE_peak_2_at_Cpt2_5end|id=chr4:107596084..107596100,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!7.68e-10!43;UBERON:0005409!9.41e-10!59;UBERON:0009854!5.79e-08!23;UBERON:0009856!5.79e-08!23;UBERON:0000344!5.90e-08!15;UBERON:0002107!2.21e-07!22;UBERON:0007499!2.21e-07!22;UBERON:0006925!2.21e-07!22;UBERON:0009497!2.21e-07!22;UBERON:0000015!2.21e-07!22;UBERON:0002423!2.21e-07!22;UBERON:0006235!2.21e-07!22;UBERON:0008835!2.21e-07!22;UBERON:0003894!2.21e-07!22;UBERON:0004161!2.21e-07!22;UBERON:0008836!2.21e-07!22;UBERON:0002365!3.54e-07!25;UBERON:0002330!3.54e-07!25;UBERON:0001242!6.15e-07!13;UBERON:0000060!6.15e-07!13;UBERON:0001262!6.15e-07!13;UBERON:0004786!6.15e-07!13;UBERON:0004119!7.52e-07!130;UBERON:0000925!7.52e-07!130;UBERON:0006595!7.52e-07!130|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.63e-14,31;UBERON:0005409,9.02e-12,47;UBERON:0000344,8.13e-09,15;UBERON:0009854,3.14e-08,23;UBERON:0009856,3.14e-08,23;UBERON:0004119,3.36e-08,118;UBERON:0000925,3.36e-08,118;UBERON:0006595,3.36e-08,118;UBERON:0001007,9.22e-08,116;UBERON:0001555,9.22e-08,116;UBERON:0007026,9.22e-08,116;UBERON:0001242,1.16e-07,13;UBERON:0001262,1.16e-07,13;UBERON:0004786,1.16e-07,13;UBERON:0002107,1.38e-07,22;UBERON:0007499,1.38e-07,22;UBERON:0006925,1.38e-07,22;UBERON:0009497,1.38e-07,22;UBERON:0000015,1.38e-07,22;UBERON:0002423,1.38e-07,22;UBERON:0006235,1.38e-07,22;UBERON:0008835,1.38e-07,22;UBERON:0003894,1.38e-07,22;UBERON:0004161,1.38e-07,22;UBERON:0008836,1.38e-07,22;UBERON:0002365,3.28e-07,25;UBERON:0002330,3.28e-07,25;UBERON:0004921,4.94e-07,114|phase1_expression=0.160148847104794,6.2815573375085,11.3749809847384,6.95667686005709,9.01612313903425,4.70061961353291,4.43864017131499,0,0.140788722151667,0.234064526321993,0,0,0,0.262261207256992,0.666219523631325,0,0.699561878128147,0.157731082679119,0.274228867211478,0,2.12608225377674,0.198581902401771,0.261199789138935,9.43955294481099,5.50582274561208,9.76194338995534,13.7843838770904,8.40337807474967,13.1116159424898,6.5527833737582,8.20402889424627,1.27006134691926,0.61506478758457,0,2.3108129580102,1.99481574430191,1.83752420636132,0.418531630736908,1.5626706890476,1.0470474879476,1.17646297606203,0.683045484958446,0.971020706062307,0,0.506884656097573,0,2.34717403304412,0.872100625521786,1.31811709640683,1.94429899074283,3.49966054063406,1.43752564364972,0,0,0,0.514518872071894,2.0057340795713,1.54701627683233,0,0,0,1.35537812827653,1.77858959222228,0,0,0.7104801149461,1.19840044207362,0.768436610643109,0.103689612308478,0,0,0.285650984403804,0.662605622854841,0,0,0,0,0.255374676170375,0.153606533256243,0.263772575460388,0.182975287204819,1.04182674111352,0.837548997004143,0.56276261003168,0,0.294628585473668,0.427115042397309,0.559198337475902,0.454357159999104,1.20914496170857,2.31891590961342,5.16254326188832,1.3599426674155,7.55584468292944,8.4470934268197,15.2329141613094,5.75822122540183,0.340860645156116,1.29893002301434,0.70667914902068,0.845060518660083,0,0,0,1.5154372870785,0.760079596425296,1.01104889002957,9.36307813696292,0.776813650941515,2.67195850316685,1.04091196059682,2.43572382649713,1.84492397804847,1.95939432718409,2.70454026412121,5.52933001850572,2.71914464507811,17.2073234734695,0.884610551949874,0.970601099684455,2.20841518460394,0.484875253135222,11.1835056730873,0,0.41889341362691,9.96282515313506,0.11981512450592,0.599902730993408,0.508280908292259,0.299581278809645,0.457500602818626,0.125654352112864,0.173824320192276,0.255715457330331,0,0,0.407357455401265,0.746441823660558,0.505445516867349,4.8401626853889,0.520481771850815,0.459804208866946,0.720248519221397,0.150704817835715,0.544291993210623,0.12811372028485,0.187403449119458,1.03481348295606,0.646703978798527,0.567318240503458,0.351902248327898,0,0.278047249225598,0,0.205782136407943,0,0,0.772043721344145,0,2.07125772535502,0.703578179943289,1.44049649168812,1.18372367792605,0.590292695242212,1.07986979021165,0.930135779001631,2.41446061259657,1.98501082024188,2.13927804887525,3.61168420974009,7.45833047821873,7.45619935869195,9.22110484222413,7.64976586934119,0.630869845692382,0.514523061896422,21.1468021109631,13.7514294665043,0.426576501070468,0.464473343720877,1.54640953586512,2.8235693447268,6.0042071838115,3.80451252225118,7.11793592316767,3.95277491337626,3.51869292320377,5.37182474511107,5.06906626509712,9.88701349519644,9.51007419448655,5.97423819763102,0.948339504765408,0.913988100877831,0,1.01825663922657,1.16371492300575,1.54298803758701,4.17361145020098,4.57591458736767,4.86696056308262,8.51440431060424,8.00422093135302,2.00214126859313,1.57247196090562,0.674586337154561,1.62288097110802,1.4470629585145,0.763877555344259,3.16465751195892,5.0261920300261,5.76578967694971,5.75072826109418,5.95425516269605,8.4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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=12896 | |||
|HGNC= | |||
|MCL_coexpression_id=1455 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-32bp_to_ENSMUST00000141738_5end | |||
|cluster_id=chr4:107596084..107596100,- | |||
|description=CAGE_peak_2_at_Cpt2_5end | |||
|id=chr4:107596084..107596100,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!7.68e-10!43;UBERON:0005409!9.41e-10!59;UBERON:0009854!5.79e-08!23;UBERON:0009856!5.79e-08!23;UBERON:0000344!5.90e-08!15;UBERON:0002107!2.21e-07!22;UBERON:0007499!2.21e-07!22;UBERON:0006925!2.21e-07!22;UBERON:0009497!2.21e-07!22;UBERON:0000015!2.21e-07!22;UBERON:0002423!2.21e-07!22;UBERON:0006235!2.21e-07!22;UBERON:0008835!2.21e-07!22;UBERON:0003894!2.21e-07!22;UBERON:0004161!2.21e-07!22;UBERON:0008836!2.21e-07!22;UBERON:0002365!3.54e-07!25;UBERON:0002330!3.54e-07!25;UBERON:0001242!6.15e-07!13;UBERON:0000060!6.15e-07!13;UBERON:0001262!6.15e-07!13;UBERON:0004786!6.15e-07!13;UBERON:0004119!7.52e-07!130;UBERON:0000925!7.52e-07!130;UBERON:0006595!7.52e-07!130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.63e-14,31;UBERON:0005409,9.02e-12,47;UBERON:0000344,8.13e-09,15;UBERON:0009854,3.14e-08,23;UBERON:0009856,3.14e-08,23;UBERON:0004119,3.36e-08,118;UBERON:0000925,3.36e-08,118;UBERON:0006595,3.36e-08,118;UBERON:0001007,9.22e-08,116;UBERON:0001555,9.22e-08,116;UBERON:0007026,9.22e-08,116;UBERON:0001242,1.16e-07,13;UBERON:0001262,1.16e-07,13;UBERON:0004786,1.16e-07,13;UBERON:0002107,1.38e-07,22;UBERON:0007499,1.38e-07,22;UBERON:0006925,1.38e-07,22;UBERON:0009497,1.38e-07,22;UBERON:0000015,1.38e-07,22;UBERON:0002423,1.38e-07,22;UBERON:0006235,1.38e-07,22;UBERON:0008835,1.38e-07,22;UBERON:0003894,1.38e-07,22;UBERON:0004161,1.38e-07,22;UBERON:0008836,1.38e-07,22;UBERON:0002365,3.28e-07,25;UBERON:0002330,3.28e-07,25;UBERON:0004921,4.94e-07,114 | |||
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| |||
|short_description=p2@Cpt2 | |||
}} |
Latest revision as of 03:12, 26 September 2015
Short description: | p2@Cpt2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Cpt2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1455 |
Association with transcript: | -32bp_to_ENSMUST00000141738_5end |
EntrezGene: | Cpt2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 7.63e-14 | 31 |
gastrointestinal system | 9.02e-12 | 47 |
mucosa | 8.13e-09 | 15 |
digestive tract diverticulum | 3.14e-08 | 23 |
sac | 3.14e-08 | 23 |
endoderm-derived structure | 3.36e-08 | 118 |
endoderm | 3.36e-08 | 118 |
presumptive endoderm | 3.36e-08 | 118 |
digestive system | 9.22e-08 | 116 |
digestive tract | 9.22e-08 | 116 |
primitive gut | 9.22e-08 | 116 |
intestinal mucosa | 1.16e-07 | 13 |
wall of intestine | 1.16e-07 | 13 |
gastrointestinal system mucosa | 1.16e-07 | 13 |
liver | 1.38e-07 | 22 |
epithelial sac | 1.38e-07 | 22 |
digestive gland | 1.38e-07 | 22 |
epithelium of foregut-midgut junction | 1.38e-07 | 22 |
anatomical boundary | 1.38e-07 | 22 |
hepatobiliary system | 1.38e-07 | 22 |
foregut-midgut junction | 1.38e-07 | 22 |
hepatic diverticulum | 1.38e-07 | 22 |
liver primordium | 1.38e-07 | 22 |
septum transversum | 1.38e-07 | 22 |
liver bud | 1.38e-07 | 22 |
exocrine gland | 3.28e-07 | 25 |
exocrine system | 3.28e-07 | 25 |
subdivision of digestive tract | 4.94e-07 | 114 |