FFCP PHASE1:Mm9::chr2:164568682..164568711,-: Difference between revisions
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{{FFCP|EntrezGene=71856|HGNC=|MCL_coexpression_id=37|UniProt=Q14AE4|association_with_transcript=55bp_to_NM_027961,uc008nvt.1_5end|description=CAGE_peak_3_at_Wfdc3_5end|id=chr2:164568682..164568711,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002605,9.72e-11,2;CL:0002604,9.72e-11,2;CL:0000128,7.92e-08,6;CL:0000126,7.92e-08,6;CL:0000127,7.92e-08,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000466!4.49e-13!79;UBERON:0002365!4.31e-11!25;UBERON:0002330!4.31e-11!25;UBERON:0005256!1.99e-10!47;UBERON:0002100!3.11e-10!98;UBERON:0001264!6.44e-10!12;UBERON:0003922!6.44e-10!12;UBERON:0002114!6.44e-10!12;UBERON:0003923!6.44e-10!12;UBERON:0003924!6.44e-10!12;UBERON:0003921!6.44e-10!12;UBERON:0002107!1.43e-09!22;UBERON:0007499!1.43e-09!22;UBERON:0006925!1.43e-09!22;UBERON:0009497!1.43e-09!22;UBERON:0000015!1.43e-09!22;UBERON:0002423!1.43e-09!22;UBERON:0006235!1.43e-09!22;UBERON:0008835!1.43e-09!22;UBERON:0003894!1.43e-09!22;UBERON:0004161!1.43e-09!22;UBERON:0008836!1.43e-09!22;UBERON:0009854!5.74e-09!23;UBERON:0009856!5.74e-09!23;UBERON:0001045!6.15e-09!13;UBERON:0002108!3.89e-08!16;UBERON:0003914!5.55e-08!47;UBERON:0000077!1.04e-07!97;UBERON:0005177!1.22e-07!85;UBERON:0003104!7.63e-07!131;UBERON:0009142!7.63e-07!131|ontology_enrichment_uberon_v019_2=UBERON:0002365,9.99e-12,25;UBERON:0002330,9.99e-12,25;UBERON:0001911,1.22e-11,2;UBERON:0000076,1.22e-11,2;UBERON:0005333,1.22e-11,2;UBERON:0008425,1.22e-11,2;UBERON:0005311,1.22e-11,2;UBERON:0000162,7.17e-08,3;UBERON:0001353,7.17e-08,3;UBERON:0000163,7.17e-08,3;UBERON:0006866,7.17e-08,3;UBERON:0001046,7.17e-08,3;UBERON:0000164,7.17e-08,3;UBERON:0000931,7.17e-08,3;UBERON:0005256,1.02e-07,45;UBERON:0002107,1.72e-07,22;UBERON:0007499,1.72e-07,22;UBERON:0006925,1.72e-07,22;UBERON:0009497,1.72e-07,22;UBERON:0000015,1.72e-07,22;UBERON:0002423,1.72e-07,22;UBERON:0006235,1.72e-07,22;UBERON:0008835,1.72e-07,22;UBERON:0003894,1.72e-07,22;UBERON:0004161,1.72e-07,22;UBERON:0008836,1.72e-07,22;UBERON:0009854,3.80e-07,23;UBERON:0009856,3.80e-07,23|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.304130793658544,0.550640256485045,0,0.436050312760893,3.95435128922049,1.36100929351998,0.419959264876088,1.43752564364972,0,0,0,0.257259436035947,0,0.515672092277442,0,0,0,0,0.889294796111139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0,1.73918693221007,1.72084775396277,0,0,0,0,0.421333260395256,0,0,0.35333957451034,0.845060518660083,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622034853050465,4.54900965180614,0,0,0,0,0.150704817835715,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201683524623343,0,0,0,0.164698954724011,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0.166845105716094,0,0.224862112384854,0.405720242777006,0.241177159752417,0.50925170356284,0,0.486405680325106,1.37280706594041,1.43768206527355,1.11642284300551,1.87222603868736,0.252578877947112,0,0.482443521363367,0.369506380333209,0,0,0,0,0,0.476087281772027,0.195133647857799,0.157635144106191,0,0,0,0,0.723245292907558,0,0,136.710467899292,39.7348914678815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0.164970122972535,0,0.728341908464944,0.604647113929502,0.943025398779491,1.47650946440386,0.922305443831782,0,0.727067458955011,0.356497378384721,0.948110273807448,2.10837217149998,1.03135543248187,0,0,0,0,0,0,0,0,0.23467170806371,0,39.9156400479481,4.61681508236144,0,0.0603129249281559,0.119372344003136,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0.134864346384821,0.247960367176008,0,0.129614973291793,0,0,0.598066184175915,0.496375471371293,0.194451188344048,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.67060228661162,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0.238436189947321,0,0.188218760830661,0,0,0,0.135804113845862,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0|short_description=p3@Wfdc3}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=71856 | |||
|HGNC= | |||
|MCL_coexpression_id=37 | |||
|TSSclassifier=NA | |||
|UniProt=Q14AE4 | |||
|association_with_transcript=55bp_to_NM_027961,uc008nvt.1_5end | |||
|cluster_id=chr2:164568682..164568711,- | |||
|description=CAGE_peak_3_at_Wfdc3_5end | |||
|id=chr2:164568682..164568711,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,9.72e-11,2;CL:0002604,9.72e-11,2;CL:0000128,7.92e-08,6;CL:0000126,7.92e-08,6;CL:0000127,7.92e-08,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000466!4.49e-13!79;UBERON:0002365!4.31e-11!25;UBERON:0002330!4.31e-11!25;UBERON:0005256!1.99e-10!47;UBERON:0002100!3.11e-10!98;UBERON:0001264!6.44e-10!12;UBERON:0003922!6.44e-10!12;UBERON:0002114!6.44e-10!12;UBERON:0003923!6.44e-10!12;UBERON:0003924!6.44e-10!12;UBERON:0003921!6.44e-10!12;UBERON:0002107!1.43e-09!22;UBERON:0007499!1.43e-09!22;UBERON:0006925!1.43e-09!22;UBERON:0009497!1.43e-09!22;UBERON:0000015!1.43e-09!22;UBERON:0002423!1.43e-09!22;UBERON:0006235!1.43e-09!22;UBERON:0008835!1.43e-09!22;UBERON:0003894!1.43e-09!22;UBERON:0004161!1.43e-09!22;UBERON:0008836!1.43e-09!22;UBERON:0009854!5.74e-09!23;UBERON:0009856!5.74e-09!23;UBERON:0001045!6.15e-09!13;UBERON:0002108!3.89e-08!16;UBERON:0003914!5.55e-08!47;UBERON:0000077!1.04e-07!97;UBERON:0005177!1.22e-07!85;UBERON:0003104!7.63e-07!131;UBERON:0009142!7.63e-07!131 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002365,9.99e-12,25;UBERON:0002330,9.99e-12,25;UBERON:0001911,1.22e-11,2;UBERON:0000076,1.22e-11,2;UBERON:0005333,1.22e-11,2;UBERON:0008425,1.22e-11,2;UBERON:0005311,1.22e-11,2;UBERON:0000162,7.17e-08,3;UBERON:0001353,7.17e-08,3;UBERON:0000163,7.17e-08,3;UBERON:0006866,7.17e-08,3;UBERON:0001046,7.17e-08,3;UBERON:0000164,7.17e-08,3;UBERON:0000931,7.17e-08,3;UBERON:0005256,1.02e-07,45;UBERON:0002107,1.72e-07,22;UBERON:0007499,1.72e-07,22;UBERON:0006925,1.72e-07,22;UBERON:0009497,1.72e-07,22;UBERON:0000015,1.72e-07,22;UBERON:0002423,1.72e-07,22;UBERON:0006235,1.72e-07,22;UBERON:0008835,1.72e-07,22;UBERON:0003894,1.72e-07,22;UBERON:0004161,1.72e-07,22;UBERON:0008836,1.72e-07,22;UBERON:0009854,3.80e-07,23;UBERON:0009856,3.80e-07,23 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.304130793658544,0.550640256485045,0,0.436050312760893,3.95435128922049,1.36100929351998,0.419959264876088,1.43752564364972,0,0,0,0.257259436035947,0,0.515672092277442,0,0,0,0,0.889294796111139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0,1.73918693221007,1.72084775396277,0,0,0,0,0.421333260395256,0,0,0.35333957451034,0.845060518660083,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622034853050465,4.54900965180614,0,0,0,0,0.150704817835715,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201683524623343,0,0,0,0.164698954724011,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0.166845105716094,0,0.224862112384854,0.405720242777006,0.241177159752417,0.50925170356284,0,0.486405680325106,1.37280706594041,1.43768206527355,1.11642284300551,1.87222603868736,0.252578877947112,0,0.482443521363367,0.369506380333209,0,0,0,0,0,0.476087281772027,0.195133647857799,0.157635144106191,0,0,0,0,0.723245292907558,0,0,136.710467899292,39.7348914678815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0.164970122972535,0,0.728341908464944,0.604647113929502,0.943025398779491,1.47650946440386,0.922305443831782,0,0.727067458955011,0.356497378384721,0.948110273807448,2.10837217149998,1.03135543248187,0,0,0,0,0,0,0,0,0.23467170806371,0,39.9156400479481,4.61681508236144,0,0.0603129249281559,0.119372344003136,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0.134864346384821,0.247960367176008,0,0.129614973291793,0,0,0.598066184175915,0.496375471371293,0.194451188344048,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.67060228661162,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0.238436189947321,0,0.188218760830661,0,0,0,0.135804113845862,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0 | |||
|short_description=p3@Wfdc3 | |||
}} |
Latest revision as of 03:25, 26 September 2015
Short description: | p3@Wfdc3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Wfdc3_5end |
Coexpression cluster: | MCL_coexpression_mm9:37 |
Association with transcript: | 55bp_to_NM_027961, uc008nvt.1_5end |
EntrezGene: | Wfdc3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 9.72e-11 | 2 |
astrocyte of the hippocampus | 9.72e-11 | 2 |
oligodendrocyte | 7.92e-08 | 6 |
macroglial cell | 7.92e-08 | 6 |
astrocyte | 7.92e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
exocrine gland | 9.99e-12 | 25 |
exocrine system | 9.99e-12 | 25 |
mammary gland | 1.22e-11 | 2 |
external ectoderm | 1.22e-11 | 2 |
mammary bud | 1.22e-11 | 2 |
mammary ridge | 1.22e-11 | 2 |
mammary placode | 1.22e-11 | 2 |
cloaca | 7.17e-08 | 3 |
anal region | 7.17e-08 | 3 |
embryonic cloaca | 7.17e-08 | 3 |
terminal part of digestive tract | 7.17e-08 | 3 |
hindgut | 7.17e-08 | 3 |
primitive urogenital sinus | 7.17e-08 | 3 |
proctodeum | 7.17e-08 | 3 |
trunk mesenchyme | 1.02e-07 | 45 |
liver | 1.72e-07 | 22 |
epithelial sac | 1.72e-07 | 22 |
digestive gland | 1.72e-07 | 22 |
epithelium of foregut-midgut junction | 1.72e-07 | 22 |
anatomical boundary | 1.72e-07 | 22 |
hepatobiliary system | 1.72e-07 | 22 |
foregut-midgut junction | 1.72e-07 | 22 |
hepatic diverticulum | 1.72e-07 | 22 |
liver primordium | 1.72e-07 | 22 |
septum transversum | 1.72e-07 | 22 |
liver bud | 1.72e-07 | 22 |
digestive tract diverticulum | 3.80e-07 | 23 |
sac | 3.80e-07 | 23 |