FFCP PHASE1:Mm9::chr2:164658938..164658980,-: Difference between revisions
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{{FFCP|EntrezGene=415115|HGNC=|MCL_coexpression_id=35|UniProt=A2A5J5|association_with_transcript=0bp_to_ENSMUST00000042775_5end|description=CAGE_peak_1_at_Neurl2_5end|id=chr2:164658938..164658980,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004535!1.81e-12!23;UBERON:0001009!1.81e-12!23;UBERON:0007100!2.12e-12!18;UBERON:0000948!2.12e-12!18;UBERON:0005498!2.12e-12!18;UBERON:0004140!2.12e-12!18;UBERON:0009881!2.12e-12!18;UBERON:0004141!2.12e-12!18;UBERON:0003084!2.12e-12!18;UBERON:0007005!2.12e-12!18;UBERON:0004139!2.12e-12!18;UBERON:0004291!2.12e-12!18;UBERON:0004872!3.90e-09!33|ontology_enrichment_uberon_v019_2=UBERON:0004535,1.29e-12,23;UBERON:0001009,1.29e-12,23;UBERON:0007100,1.52e-12,18;UBERON:0000948,1.52e-12,18;UBERON:0005498,1.52e-12,18;UBERON:0004140,1.52e-12,18;UBERON:0009881,1.52e-12,18;UBERON:0004141,1.52e-12,18;UBERON:0003084,1.52e-12,18;UBERON:0007005,1.52e-12,18;UBERON:0004139,1.52e-12,18;UBERON:0004291,1.52e-12,18;UBERON:0004872,4.55e-09,33|phase1_expression=3.52327463630547,0.348975407639361,0.454999239389536,0,0,0,0,0,0.422366166455,0.468129052643987,0.513653904676515,0.319088635981346,0.171200729931206,0.0874204024189974,0.999329285446988,1.41732687172878,0,8.67520954735154,6.85572168028694,9.76096199135469,2.12608225377674,4.86525660884338,3.13439746966722,2.71987118748791,4.81759490241057,0,0,0,0,0.252030129759931,0.221730510655305,9.52546010189447,4.92051830067656,0,0,0,0,0.418531630736908,0.7813353445238,1.0470474879476,0,0,0,4.53228544712078,6.2853697356099,11.7469921383476,6.25913075478431,9.59310688073965,12.3024262331304,9.3326351555656,6.29938897314131,7.18762821824858,4.02678254538567,0,0.336093799142464,6.68874533693462,15.4728057566929,15.4701627683233,1.01158230429799,2.64495489636016,1.26766280701236,5.42151251310611,2.66788438833342,20.6976934974722,29.6659908770092,29.8401648277362,16.1784059679939,8.06858441175265,0.622137673850866,0.810035629990144,0.841299845405528,3.71346279724945,1.76694832761291,0.734944795289724,0.575072826109418,0.919218786610021,2.20231761998777,1.91531007127782,1.84327839907492,0.791317726381163,1.64677758484337,0,1.11673199600552,2.25105044012672,1.98637722109853,3.53554302568401,2.27794689278565,1.67759501242771,0.605809546665472,0.982430281388212,2.89864488701678,3.44169550792555,4.0798280022465,1.07940638327563,1.29955283489534,0.448026887097336,13.0613310722529,6.13549161281008,12.2099422163348,11.3068663843309,0.704217098883403,3.84979432242953,2.54805239706646,0,0.216491041011214,0.253359865475099,0,1.7127581957859,3.10725460376606,0.593768556259299,2.25530924795977,4.26251669636998,2.53677046981664,1.80867168663147,2.23418543557839,1.25666591329675,1.97755974187499,2.74738778147832,10.6153266233985,22.8091258425847,14.1338571814652,12.1218813283806,1.86391761218122,3.51336956413857,2.51336048176146,1.27728527604296,4.91242010474273,6.59893004092748,6.4805815807263,1.64769703345305,1.83000241127451,0.628271760564322,1.04294592115366,0.767146371990992,1.0389402227978,0.811206315338788,3.56437773476107,5.59831367745419,0.252722758433675,1.89397670297827,2.08192708740326,2.5289231487682,2.52086981727489,3.16480117455002,2.72145996605311,2.43416068541215,2.71735001223214,2.58703370739016,1.29340795759705,3.21480336285293,3.16712023495108,3.94552318369635,1.66828349535359,5.92028683087683,3.2925141825271,2.9855140022774,7.02213187313235,5.40430604940902,3.40996199274711,28.9976081549703,29.7848096175992,27.1893712806132,23.4377288229358,24.5955289684255,28.2308816583902,34.18248987831,33.2659017735528,26.6224980597146,26.1650161362434,27.580133965288,27.2391200074075,34.2107970575278,35.5671186771502,34.3568432026552,1.89260953707715,1.3377599609307,0,0.264450566663544,2.55945900642281,2.32236671860439,2.57734922644187,1.61346819698674,3.33567065767305,2.85338439168839,1.42358718463353,1.97638745668813,2.5133520880027,2.38747766449381,0.779856348476481,2.69645822596266,0.864552199498777,1.1948476395262,6.06937283049861,2.85621281524322,4.50830942692322,3.05476991767971,3.49114476901726,2.87556861550306,2.02356918797623,0.885660887877613,0.941992367048249,2.96153193412321,0.889357881261447,1.50160595144485,1.17935397067922,1.79889689907883,1.42002084971952,0.482354319504834,3.05551022137704,0.863088412352432,2.7562988551756,0.823684239564244,2.87536413054709,3.34926852901653,1.87222603868736,2.52578877947112,2.33216637578486,7.71909634181387,2.77129785249907,4.54779388249163,3.58522948172457,2.8856664581782,3.52035372432753,3.35012514883632,4.52282917683426,2.92700471786698,4.57141917907954,3.76489972402917,2.23236676120482,3.60499292374624,3.10832967358612,2.74833211304872,13.5712155545345,4.89515115436839,1.47529281905711,0.827810238914197,0.481651769963376,0.937693492737625,5.40985319743029,39.3854646438822,2.52406575533005,2.73307121007647,1.93881057959519,4.06246956519338,4.90157082981267,3.67999490025482,3.6432963150740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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=415115 | |||
|HGNC= | |||
|MCL_coexpression_id=35 | |||
|TSSclassifier=NA | |||
|UniProt=A2A5J5 | |||
|association_with_transcript=0bp_to_ENSMUST00000042775_5end | |||
|cluster_id=chr2:164658938..164658980,- | |||
|description=CAGE_peak_1_at_Neurl2_5end | |||
|id=chr2:164658938..164658980,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!1.81e-12!23;UBERON:0001009!1.81e-12!23;UBERON:0007100!2.12e-12!18;UBERON:0000948!2.12e-12!18;UBERON:0005498!2.12e-12!18;UBERON:0004140!2.12e-12!18;UBERON:0009881!2.12e-12!18;UBERON:0004141!2.12e-12!18;UBERON:0003084!2.12e-12!18;UBERON:0007005!2.12e-12!18;UBERON:0004139!2.12e-12!18;UBERON:0004291!2.12e-12!18;UBERON:0004872!3.90e-09!33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004535,1.29e-12,23;UBERON:0001009,1.29e-12,23;UBERON:0007100,1.52e-12,18;UBERON:0000948,1.52e-12,18;UBERON:0005498,1.52e-12,18;UBERON:0004140,1.52e-12,18;UBERON:0009881,1.52e-12,18;UBERON:0004141,1.52e-12,18;UBERON:0003084,1.52e-12,18;UBERON:0007005,1.52e-12,18;UBERON:0004139,1.52e-12,18;UBERON:0004291,1.52e-12,18;UBERON:0004872,4.55e-09,33 | |||
|phase1_expression=3.52327463630547,0.348975407639361,0.454999239389536,0,0,0,0,0,0.422366166455,0.468129052643987,0.513653904676515,0.319088635981346,0.171200729931206,0.0874204024189974,0.999329285446988,1.41732687172878,0,8.67520954735154,6.85572168028694,9.76096199135469,2.12608225377674,4.86525660884338,3.13439746966722,2.71987118748791,4.81759490241057,0,0,0,0,0.252030129759931,0.221730510655305,9.52546010189447,4.92051830067656,0,0,0,0,0.418531630736908,0.7813353445238,1.0470474879476,0,0,0,4.53228544712078,6.2853697356099,11.7469921383476,6.25913075478431,9.59310688073965,12.3024262331304,9.3326351555656,6.29938897314131,7.18762821824858,4.02678254538567,0,0.336093799142464,6.68874533693462,15.4728057566929,15.4701627683233,1.01158230429799,2.64495489636016,1.26766280701236,5.42151251310611,2.66788438833342,20.6976934974722,29.6659908770092,29.8401648277362,16.1784059679939,8.06858441175265,0.622137673850866,0.810035629990144,0.841299845405528,3.71346279724945,1.76694832761291,0.734944795289724,0.575072826109418,0.919218786610021,2.20231761998777,1.91531007127782,1.84327839907492,0.791317726381163,1.64677758484337,0,1.11673199600552,2.25105044012672,1.98637722109853,3.53554302568401,2.27794689278565,1.67759501242771,0.605809546665472,0.982430281388212,2.89864488701678,3.44169550792555,4.0798280022465,1.07940638327563,1.29955283489534,0.448026887097336,13.0613310722529,6.13549161281008,12.2099422163348,11.3068663843309,0.704217098883403,3.84979432242953,2.54805239706646,0,0.216491041011214,0.253359865475099,0,1.7127581957859,3.10725460376606,0.593768556259299,2.25530924795977,4.26251669636998,2.53677046981664,1.80867168663147,2.23418543557839,1.25666591329675,1.97755974187499,2.74738778147832,10.6153266233985,22.8091258425847,14.1338571814652,12.1218813283806,1.86391761218122,3.51336956413857,2.51336048176146,1.27728527604296,4.91242010474273,6.59893004092748,6.4805815807263,1.64769703345305,1.83000241127451,0.628271760564322,1.04294592115366,0.767146371990992,1.0389402227978,0.811206315338788,3.56437773476107,5.59831367745419,0.252722758433675,1.89397670297827,2.08192708740326,2.5289231487682,2.52086981727489,3.16480117455002,2.72145996605311,2.43416068541215,2.71735001223214,2.58703370739016,1.29340795759705,3.21480336285293,3.16712023495108,3.94552318369635,1.66828349535359,5.92028683087683,3.2925141825271,2.9855140022774,7.02213187313235,5.40430604940902,3.40996199274711,28.9976081549703,29.7848096175992,27.1893712806132,23.4377288229358,24.5955289684255,28.2308816583902,34.18248987831,33.2659017735528,26.6224980597146,26.1650161362434,27.580133965288,27.2391200074075,34.2107970575278,35.5671186771502,34.3568432026552,1.89260953707715,1.3377599609307,0,0.264450566663544,2.55945900642281,2.32236671860439,2.57734922644187,1.61346819698674,3.33567065767305,2.85338439168839,1.42358718463353,1.97638745668813,2.5133520880027,2.38747766449381,0.779856348476481,2.69645822596266,0.864552199498777,1.1948476395262,6.06937283049861,2.85621281524322,4.50830942692322,3.05476991767971,3.49114476901726,2.87556861550306,2.02356918797623,0.885660887877613,0.941992367048249,2.96153193412321,0.889357881261447,1.50160595144485,1.17935397067922,1.79889689907883,1.42002084971952,0.482354319504834,3.05551022137704,0.863088412352432,2.7562988551756,0.823684239564244,2.87536413054709,3.34926852901653,1.87222603868736,2.52578877947112,2.33216637578486,7.71909634181387,2.77129785249907,4.54779388249163,3.58522948172457,2.8856664581782,3.52035372432753,3.35012514883632,4.52282917683426,2.92700471786698,4.57141917907954,3.76489972402917,2.23236676120482,3.60499292374624,3.10832967358612,2.74833211304872,13.5712155545345,4.89515115436839,1.47529281905711,0.827810238914197,0.481651769963376,0.937693492737625,5.40985319743029,39.3854646438822,2.52406575533005,2.73307121007647,1.93881057959519,4.06246956519338,4.90157082981267,3.67999490025482,3.64329631507405,4.09158201075837,3.16230222357219,3.21321316421807,4.25820255624806,3.73937767701236,2.60619134965722,6.43383479592888,1.32745138339963,1.45668381692989,1.209294227859,1.50884063804718,1.77181135728464,0.614870295887855,2.06742634534577,0.727067458955011,4.27796854061666,0.632073515871632,0,1.03135543248187,1.02131881726136,1.44048875225048,3.23396709456886,1.92903331528433,1.59606210278046,2.31879462882692,1.97458824722545,3.34911444026059,0.938686832254841,1.69465656691056,1.54369878638473,3.95727007059552,5.00539722757307,1.93001359770099,2.14870219205646,0.984845398470368,1.7488850197791,1.66882771809459,3.93003025835061,4.74689796315412,2.22233432843654,1.31857919903284,1.36694227721025,1.83022538565218,2.71965487990169,2.23922323717853,2.48759952847963,1.90934123603023,2.84702394223022,1.82987520414164,3.99619761040665,1.88179466413022,3.05707589244649,3.2367443132357,3.71940550764012,2.35580347785627,1.42576470620972,0.621339313086926,0,4.33597983527538,5.12921320417003,0.972255941720238,4.26227417476513,2.02747350588934,2.93393096614385,2.8644964665669,1.99232754408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| |||
|short_description=p1@Neurl2 | |||
}} |
Latest revision as of 03:34, 26 September 2015
Short description: | p1@Neurl2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Neurl2_5end |
Coexpression cluster: | MCL_coexpression_mm9:35 |
Association with transcript: | 0bp_to_ENSMUST00000042775_5end |
EntrezGene: | Neurl2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiovascular system | 1.29e-12 | 23 |
circulatory system | 1.29e-12 | 23 |
primary circulatory organ | 1.52e-12 | 18 |
heart | 1.52e-12 | 18 |
primitive heart tube | 1.52e-12 | 18 |
primary heart field | 1.52e-12 | 18 |
anterior lateral plate mesoderm | 1.52e-12 | 18 |
heart tube | 1.52e-12 | 18 |
heart primordium | 1.52e-12 | 18 |
cardiac mesoderm | 1.52e-12 | 18 |
cardiogenic plate | 1.52e-12 | 18 |
heart rudiment | 1.52e-12 | 18 |
splanchnic layer of lateral plate mesoderm | 4.55e-09 | 33 |