FFCP PHASE1:Mm9::chr2:165109268..165109289,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=228875 | |EntrezGene=228875 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=987 | |||
|TSSclassifier=NA | |||
|UniProt=E0CYZ1,Q5GMH1 | |UniProt=E0CYZ1,Q5GMH1 | ||
|association_with_transcript=-168bp_to_ENSMUST00000145301,ENSMUST00000155289_5end | |association_with_transcript=-168bp_to_ENSMUST00000145301,ENSMUST00000155289_5end | ||
|cluster_id=chr2:165109268..165109289,- | |||
|description=CAGE_peak_7_at_Slc35c2_5end | |description=CAGE_peak_7_at_Slc35c2_5end | ||
|id=chr2:165109268..165109289,- | |id=chr2:165109268..165109289,- | ||
|ontology_enrichment_celltype=CL:0002563!6.20e-12!9;CL:0002251!6.20e-12!9;CL:0000239!2.53e-08!6;CL:0000677!2.53e-08!6;CL:0000212!2.53e-08!6;CL:0000584!2.53e-08!6;CL:0000075!4.77e-07!7;CL:0000473!6.61e-07!3;CL:0000627!6.61e-07!3;CL:0000682!6.61e-07!3;CL:0000066!7.24e-07!25 | |ontology_enrichment_celltype=CL:0002563!6.20e-12!9;CL:0002251!6.20e-12!9;CL:0000239!2.53e-08!6;CL:0000677!2.53e-08!6;CL:0000212!2.53e-08!6;CL:0000584!2.53e-08!6;CL:0000075!4.77e-07!7;CL:0000473!6.61e-07!3;CL:0000627!6.61e-07!3;CL:0000682!6.61e-07!3;CL:0000066!7.24e-07!25 | ||
|ontology_enrichment_celltype_v019_2=CL:0000682,2.33e-12,3;CL:0000239,1.29e-10,6;CL:0000677,1.29e-10,6;CL:0000584,1.29e-10,6;CL:0000075,4.13e-09,7;CL:0002563,4.25e-07,9;CL:0002251,4.25e-07,9;CL:0000066,7.95e-07,25 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.37e-25!43;UBERON:0000344!6.51e-21!15;UBERON:0005409!1.52e-19!59;UBERON:0001242!9.21e-18!13;UBERON:0000060!9.21e-18!13;UBERON:0001262!9.21e-18!13;UBERON:0004786!9.21e-18!13;UBERON:0003350!6.20e-12!9;UBERON:0004808!6.20e-12!9;UBERON:0001277!6.20e-12!9;UBERON:0004923!1.05e-11!24;UBERON:0000485!1.78e-09!11;UBERON:0001007!5.42e-07!128;UBERON:0001555!5.42e-07!128;UBERON:0007026!5.42e-07!128;UBERON:0004119!9.13e-07!130;UBERON:0000925!9.13e-07!130;UBERON:0006595!9.13e-07!130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.93e-32,31;UBERON:0005409,2.40e-20,47;UBERON:0000344,1.15e-11,15;UBERON:0001007,1.81e-09,116;UBERON:0001555,1.81e-09,116;UBERON:0007026,1.81e-09,116;UBERON:0004119,3.02e-09,118;UBERON:0000925,3.02e-09,118;UBERON:0006595,3.02e-09,118;UBERON:0001962,6.86e-08,2;UBERON:0001961,6.86e-08,2;UBERON:0001744,6.86e-08,2;UBERON:0004921,1.68e-07,114;UBERON:0001242,2.07e-07,13;UBERON:0001262,2.07e-07,13;UBERON:0004786,2.07e-07,13;UBERON:0003350,4.25e-07,9;UBERON:0004808,4.25e-07,9;UBERON:0001277,4.25e-07,9;UBERON:0004923,5.72e-07,24 | |||
|phase1_expression=0,6.63053274514786,4.09499315450582,3.93203474698879,8.01433167914156,0,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27993938234725,1.37645568640302,7.46501553349526,2.15380998079537,7.32602191132023,0.380046838912748,0.756090389279792,0.221730510655305,0,0,0,0.288851619751275,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.91347103775248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81002760729451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.2429822724977,15.073682299822,0,0,0,0.403367049246685,1.11189021922435,1.90225626112559,6.16887780007865,5.59976446061637,1.25667604400135,0.596869416123452,1.55971269695296,7.19055526923377,3.45820879799511,4.58024928485045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03371317267288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.95517422270746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.87345025498471,0,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0.25347929989024,0,0.187283014939765,0.128050304809739,0.114870937911227,0.476293691283074,0.115884325944855,0,0,0.294397840268795,0,0,0,0.290692833264657,0,0,0,0.263069711437843,0.135804113845862,0.561142271657738,0,0.197008964751127,0,0.154936841185966,0,0,0.233931608445408,0,0,0,0 | |phase1_expression=0,6.63053274514786,4.09499315450582,3.93203474698879,8.01433167914156,0,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27993938234725,1.37645568640302,7.46501553349526,2.15380998079537,7.32602191132023,0.380046838912748,0.756090389279792,0.221730510655305,0,0,0,0.288851619751275,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.91347103775248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81002760729451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.2429822724977,15.073682299822,0,0,0,0.403367049246685,1.11189021922435,1.90225626112559,6.16887780007865,5.59976446061637,1.25667604400135,0.596869416123452,1.55971269695296,7.19055526923377,3.45820879799511,4.58024928485045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03371317267288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.95517422270746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.87345025498471,0,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0.25347929989024,0,0.187283014939765,0.128050304809739,0.114870937911227,0.476293691283074,0.115884325944855,0,0,0.294397840268795,0,0,0,0.290692833264657,0,0,0,0.263069711437843,0.135804113845862,0.561142271657738,0,0.197008964751127,0,0.154936841185966,0,0,0.233931608445408,0,0,0,0 | ||
|short_description=p7@Slc35c2 | |short_description=p7@Slc35c2 | ||
}} | }} |
Latest revision as of 04:07, 26 September 2015
Short description: | p7@Slc35c2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Slc35c2_5end |
Coexpression cluster: | MCL_coexpression_mm9:987 |
Association with transcript: | -168bp_to_ENSMUST00000145301, ENSMUST00000155289_5end |
EntrezGene: | Slc35c2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 2.33e-12 | 3 |
brush border epithelial cell | 1.29e-10 | 6 |
gut absorptive cell | 1.29e-10 | 6 |
enterocyte | 1.29e-10 | 6 |
columnar/cuboidal epithelial cell | 4.13e-09 | 7 |
intestinal epithelial cell | 4.25e-07 | 9 |
epithelial cell of alimentary canal | 4.25e-07 | 9 |
epithelial cell | 7.95e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.93e-32 | 31 |
gastrointestinal system | 2.40e-20 | 47 |
mucosa | 1.15e-11 | 15 |
digestive system | 1.81e-09 | 116 |
digestive tract | 1.81e-09 | 116 |
primitive gut | 1.81e-09 | 116 |
endoderm-derived structure | 3.02e-09 | 118 |
endoderm | 3.02e-09 | 118 |
presumptive endoderm | 3.02e-09 | 118 |
gut-associated lymphoid tissue | 6.86e-08 | 2 |
mucosa-associated lymphoid tissue | 6.86e-08 | 2 |
lymphoid tissue | 6.86e-08 | 2 |
subdivision of digestive tract | 1.68e-07 | 114 |
intestinal mucosa | 2.07e-07 | 13 |
wall of intestine | 2.07e-07 | 13 |
gastrointestinal system mucosa | 2.07e-07 | 13 |
epithelium of mucosa | 4.25e-07 | 9 |
gastrointestinal system epithelium | 4.25e-07 | 9 |
intestinal epithelium | 4.25e-07 | 9 |
organ component layer | 5.72e-07 | 24 |