FFCP PHASE1:Mm9::chr2:168559736..168559786,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=11981 | |EntrezGene=11981 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=Q8C288 | |UniProt=Q8C288 | ||
|association_with_transcript=0bp_to_uc008obb.1_5end | |association_with_transcript=0bp_to_uc008obb.1_5end | ||
|cluster_id=chr2:168559736..168559786,- | |||
|description=CAGE_peak_3_at_Atp9a_5end | |description=CAGE_peak_3_at_Atp9a_5end | ||
|id=chr2:168559736..168559786,- | |id=chr2:168559736..168559786,- | ||
|ontology_enrichment_celltype=CL:0000066!8.27e-07!25 | |ontology_enrichment_celltype=CL:0000066!8.27e-07!25 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.54e-10,25;CL:0000223,3.96e-08,20;CL:0002563,9.36e-08,9;CL:0002251,9.36e-08,9;CL:0000075,1.96e-07,7;CL:0000239,2.94e-07,6;CL:0000677,2.94e-07,6;CL:0000584,2.94e-07,6;CL:0002076,3.33e-07,15 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.84e-13!43;UBERON:0005409!6.04e-11!59;UBERON:0000344!1.71e-09!15;UBERON:0001242!2.92e-08!13;UBERON:0000060!2.92e-08!13;UBERON:0001262!2.92e-08!13;UBERON:0004786!2.92e-08!13;UBERON:0007023!6.17e-07!51 | |ontology_enrichment_uberon=UBERON:0000160!2.84e-13!43;UBERON:0005409!6.04e-11!59;UBERON:0000344!1.71e-09!15;UBERON:0001242!2.92e-08!13;UBERON:0000060!2.92e-08!13;UBERON:0001262!2.92e-08!13;UBERON:0004786!2.92e-08!13;UBERON:0007023!6.17e-07!51 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.88e-21,31;UBERON:0005409,4.75e-17,47;UBERON:0000344,1.87e-13,15;UBERON:0011216,1.30e-11,194;UBERON:0001242,1.31e-11,13;UBERON:0001262,1.31e-11,13;UBERON:0004786,1.31e-11,13;UBERON:0003350,9.36e-08,9;UBERON:0004808,9.36e-08,9;UBERON:0001277,9.36e-08,9;UBERON:0004923,2.01e-07,24;UBERON:0001007,2.26e-07,116;UBERON:0001555,2.26e-07,116;UBERON:0007026,2.26e-07,116;UBERON:0007023,2.48e-07,51;UBERON:0000485,4.90e-07,11;UBERON:0004119,5.12e-07,118;UBERON:0000925,5.12e-07,118;UBERON:0006595,5.12e-07,118 | |||
|phase1_expression=0,39.7831964708872,33.2149444754361,22.6848158480123,37.0662840160297,8.39396359559449,7.47560449905682,0.129123323441576,0,0,0,0.0797721589953364,0,0.0874204024189974,0,0,0,0,0,0,1.87095238332354,0,0,13.9193407830264,21.1056538581796,29.860062133981,19.3842898271584,18.0995835456147,22.9928337542212,19.9103802510345,13.7472916606289,0,0,0,1.1554064790051,1.82858109894342,1.02084678131185,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0.194429899074283,0.699932108126813,0,0,0,0,2.82985379639542,2.0057340795713,0,0,0,0,0,1.77858959222228,0,0,0,1.49800055259202,0.384218305321555,0,0.135005938331691,0,18.5673139862472,10.6016899656774,0,0.0958454710182364,0,16.5173821499083,6.51205424234457,5.9906547969935,0,0.0914876436024097,0,8.65467296904281,3.93933827022176,8.25110537994775,0.589257170947335,1.99320353118744,0,0.681535739998656,4.98772296704784,3.18850937571846,1.72084775396277,0.679971333707751,1.61910957491345,1.29955283489534,2.24013443548668,1.96622188184453,0,0,0,1.54927761754349,0,0,0,7.14420435337007,7.85415582972806,7.07734223020697,3.9964357901671,0,0.593768556259299,0.173485326766136,0,0,0,0,0.125666591329675,2.22475470960936,0.433798070759735,0,0,0.220841518460394,0.484875253135222,7.45567044872489,3.80615036115011,7.12118803165747,16.3492515333498,0,0,0,6.89036941262184,5.03250663100489,0.125654352112864,2.25971616249959,6.13717097592793,6.85700547046548,12.0058534670141,0.407357455401265,0.373220911830279,1.51633655060205,0.210441855886474,0,0,0,0,0.136072998302656,0,0.0937017245597288,0.776110112217047,0,0,0,0,0,0,0,0.398068533636986,0,0,0,0.207125772535502,0,0.540186184383045,0,0,0.154267112887378,0.465067889500816,0,0.350296027101508,1.15191894939436,0.985004784474571,0.810688095458557,1.31579988682799,1.09775057645525,1.47627060636409,3.78521907415429,0.102904612379284,38.9894163920882,16.1314845664762,0,0.232236671860439,0.515469845288373,2.8235693447268,3.55804870151792,5.89699440948933,20.8792787079585,11.8583247401288,26.3901969240283,23.4768637008558,18.7165523634355,21.5716658077013,15.9942156907274,13.1433240347882,0.189667900953082,0.114248512609729,0,0,0,0,0.126473074248515,0,0,0.123397163921801,1.1858105083486,0,0,0,0,0,0,0,0,0.549122826376163,1.43768206527355,0,0,0.252578877947112,1.61457672169721,0,1.10851914099963,0.189491411770485,0.325929952884052,0.169745085775188,0.234690248288502,0,0.476087281772027,0.390267295715598,0.157635144106191,0.44292937929755,0.956728611944923,0.327726629431476,0.863424909329478,1.73578870297814,0,0,0.983528546038072,0,11.559642479121,23.4423373184406,0,0,0,0.390438744296638,0.430846795465598,0.477937595905104,0.445597348164788,0.283076530788832,0.404810701674894,0.292255857911312,0.395287777946524,2.57057053137446,0.851640511249612,0,0,2.47455184458803,0,0.728341908464944,0.302323556964751,0.754420319023592,2.65771703592696,0.614870295887855,4.13485269069154,0,0.712994756769443,0.316036757935816,1.05418608574999,0,0.680879211507576,0,0.129358683782755,0,0.354680467284547,0.356737635204141,0.493647061806363,0.608929898229199,0,0,0.441056796109924,0.98931751764888,0.161464426695906,0.72375509913787,1.79058516004705,2.29797259643086,26.5247561333164,18.7279555030615,0,0,0,0,0,0,0,0,0,8.59203556213602,0,0.203319467126849,0.432021363287205,1.04544148007234,0.87345025498471,2.96701562046606,4.1326727862668,3.40282724579238,16.3314866347659,2.4853572523477,0,0.299033092087958,0.165458490457098,0,0,0,0,0.2604087696879,0.104859344425711,0,0,0,0.202725215290164,0,0.129920822977795,0,0.39736270956253,0.120195449519969,0.147689527174577,0.302899349844443,0,0.100826185136841,0.0974578807397524,0.192423683280659,0.233753804363138,1.58711268530648,0,0,0,0.965947970160952,0,1.64836461840539,0.643105137237198,0,2.25900737046827,5.06357760157895,1.14579102687879,2.92150409984269,5.48066015816514,2.2661816921691,3.37511250115903,1.80128481289688,0.906284817968409,3.10656187051092,0.103787347584177,0,0.170733605754134,0.243106717068294,0,0,0.44449345560323,0.618105171716683,0.64183841918363,0,0,0,0.187283014939765,0.576226371643824,0.516919220600519,0.952587382566147,0.463537303779422,0.192909220463705,0,0.147198920134397,0,0.177475806159338,0.238436189947321,0.290692833264657,0.282328141245992,0.676916863133412,0.548783918618318,0.263069711437843,0.543216455383447,0,0.355905054372522,0.492522411877817,0.409231043169689,0.464810523557898,0.192906610981141,0.249810577937946,0.935726433781634,0.214871054048298,0,1.32354851471709,0.231867835620421 | |phase1_expression=0,39.7831964708872,33.2149444754361,22.6848158480123,37.0662840160297,8.39396359559449,7.47560449905682,0.129123323441576,0,0,0,0.0797721589953364,0,0.0874204024189974,0,0,0,0,0,0,1.87095238332354,0,0,13.9193407830264,21.1056538581796,29.860062133981,19.3842898271584,18.0995835456147,22.9928337542212,19.9103802510345,13.7472916606289,0,0,0,1.1554064790051,1.82858109894342,1.02084678131185,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0.194429899074283,0.699932108126813,0,0,0,0,2.82985379639542,2.0057340795713,0,0,0,0,0,1.77858959222228,0,0,0,1.49800055259202,0.384218305321555,0,0.135005938331691,0,18.5673139862472,10.6016899656774,0,0.0958454710182364,0,16.5173821499083,6.51205424234457,5.9906547969935,0,0.0914876436024097,0,8.65467296904281,3.93933827022176,8.25110537994775,0.589257170947335,1.99320353118744,0,0.681535739998656,4.98772296704784,3.18850937571846,1.72084775396277,0.679971333707751,1.61910957491345,1.29955283489534,2.24013443548668,1.96622188184453,0,0,0,1.54927761754349,0,0,0,7.14420435337007,7.85415582972806,7.07734223020697,3.9964357901671,0,0.593768556259299,0.173485326766136,0,0,0,0,0.125666591329675,2.22475470960936,0.433798070759735,0,0,0.220841518460394,0.484875253135222,7.45567044872489,3.80615036115011,7.12118803165747,16.3492515333498,0,0,0,6.89036941262184,5.03250663100489,0.125654352112864,2.25971616249959,6.13717097592793,6.85700547046548,12.0058534670141,0.407357455401265,0.373220911830279,1.51633655060205,0.210441855886474,0,0,0,0,0.136072998302656,0,0.0937017245597288,0.776110112217047,0,0,0,0,0,0,0,0.398068533636986,0,0,0,0.207125772535502,0,0.540186184383045,0,0,0.154267112887378,0.465067889500816,0,0.350296027101508,1.15191894939436,0.985004784474571,0.810688095458557,1.31579988682799,1.09775057645525,1.47627060636409,3.78521907415429,0.102904612379284,38.9894163920882,16.1314845664762,0,0.232236671860439,0.515469845288373,2.8235693447268,3.55804870151792,5.89699440948933,20.8792787079585,11.8583247401288,26.3901969240283,23.4768637008558,18.7165523634355,21.5716658077013,15.9942156907274,13.1433240347882,0.189667900953082,0.114248512609729,0,0,0,0,0.126473074248515,0,0,0.123397163921801,1.1858105083486,0,0,0,0,0,0,0,0,0.549122826376163,1.43768206527355,0,0,0.252578877947112,1.61457672169721,0,1.10851914099963,0.189491411770485,0.325929952884052,0.169745085775188,0.234690248288502,0,0.476087281772027,0.390267295715598,0.157635144106191,0.44292937929755,0.956728611944923,0.327726629431476,0.863424909329478,1.73578870297814,0,0,0.983528546038072,0,11.559642479121,23.4423373184406,0,0,0,0.390438744296638,0.430846795465598,0.477937595905104,0.445597348164788,0.283076530788832,0.404810701674894,0.292255857911312,0.395287777946524,2.57057053137446,0.851640511249612,0,0,2.47455184458803,0,0.728341908464944,0.302323556964751,0.754420319023592,2.65771703592696,0.614870295887855,4.13485269069154,0,0.712994756769443,0.316036757935816,1.05418608574999,0,0.680879211507576,0,0.129358683782755,0,0.354680467284547,0.356737635204141,0.493647061806363,0.608929898229199,0,0,0.441056796109924,0.98931751764888,0.161464426695906,0.72375509913787,1.79058516004705,2.29797259643086,26.5247561333164,18.7279555030615,0,0,0,0,0,0,0,0,0,8.59203556213602,0,0.203319467126849,0.432021363287205,1.04544148007234,0.87345025498471,2.96701562046606,4.1326727862668,3.40282724579238,16.3314866347659,2.4853572523477,0,0.299033092087958,0.165458490457098,0,0,0,0,0.2604087696879,0.104859344425711,0,0,0,0.202725215290164,0,0.129920822977795,0,0.39736270956253,0.120195449519969,0.147689527174577,0.302899349844443,0,0.100826185136841,0.0974578807397524,0.192423683280659,0.233753804363138,1.58711268530648,0,0,0,0.965947970160952,0,1.64836461840539,0.643105137237198,0,2.25900737046827,5.06357760157895,1.14579102687879,2.92150409984269,5.48066015816514,2.2661816921691,3.37511250115903,1.80128481289688,0.906284817968409,3.10656187051092,0.103787347584177,0,0.170733605754134,0.243106717068294,0,0,0.44449345560323,0.618105171716683,0.64183841918363,0,0,0,0.187283014939765,0.576226371643824,0.516919220600519,0.952587382566147,0.463537303779422,0.192909220463705,0,0.147198920134397,0,0.177475806159338,0.238436189947321,0.290692833264657,0.282328141245992,0.676916863133412,0.548783918618318,0.263069711437843,0.543216455383447,0,0.355905054372522,0.492522411877817,0.409231043169689,0.464810523557898,0.192906610981141,0.249810577937946,0.935726433781634,0.214871054048298,0,1.32354851471709,0.231867835620421 | ||
|short_description=p3@Atp9a | |short_description=p3@Atp9a | ||
}} | }} |
Latest revision as of 05:28, 26 September 2015
Short description: | p3@Atp9a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Atp9a_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 0bp_to_uc008obb.1_5end |
EntrezGene: | Atp9a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.54e-10 | 25 |
endodermal cell | 3.96e-08 | 20 |
intestinal epithelial cell | 9.36e-08 | 9 |
epithelial cell of alimentary canal | 9.36e-08 | 9 |
columnar/cuboidal epithelial cell | 1.96e-07 | 7 |
brush border epithelial cell | 2.94e-07 | 6 |
gut absorptive cell | 2.94e-07 | 6 |
enterocyte | 2.94e-07 | 6 |
endo-epithelial cell | 3.33e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.88e-21 | 31 |
gastrointestinal system | 4.75e-17 | 47 |
mucosa | 1.87e-13 | 15 |
organ system subdivision | 1.30e-11 | 194 |
intestinal mucosa | 1.31e-11 | 13 |
wall of intestine | 1.31e-11 | 13 |
gastrointestinal system mucosa | 1.31e-11 | 13 |
epithelium of mucosa | 9.36e-08 | 9 |
gastrointestinal system epithelium | 9.36e-08 | 9 |
intestinal epithelium | 9.36e-08 | 9 |
organ component layer | 2.01e-07 | 24 |
digestive system | 2.26e-07 | 116 |
digestive tract | 2.26e-07 | 116 |
primitive gut | 2.26e-07 | 116 |
adult organism | 2.48e-07 | 51 |
simple columnar epithelium | 4.90e-07 | 11 |
endoderm-derived structure | 5.12e-07 | 118 |
endoderm | 5.12e-07 | 118 |
presumptive endoderm | 5.12e-07 | 118 |