FFCP PHASE1:Mm9::chr5:98609885..98609900,+: Difference between revisions
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|DHSsupport=NA | |DHSsupport=NA | ||
|DPIdataset=NA | |DPIdataset=NA | ||
|EntrezGene= | |EntrezGene=77630 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3532 | |MCL_coexpression_id=3532 | ||
|TSSclassifier=NA | |TSSclassifier=NA | ||
|UniProt= | |UniProt=B2RU90,Q8BZ97 | ||
|association_with_transcript=0bp_to_ENSMUST00000112959,NM_029947,uc008ygb.1_5end | |association_with_transcript=0bp_to_ENSMUST00000112959,NM_029947,uc008ygb.1_5end | ||
|cluster_id=chr5:98609885..98609900,+ | |cluster_id=chr5:98609885..98609900,+ | ||
Latest revision as of 10:06, 26 September 2015
| Short description: | p1@Prdm8 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Prdm8_5end |
| Coexpression cluster: | MCL_coexpression_mm9:3532 |
| Association with transcript: | 0bp_to_ENSMUST00000112959, NM_029947, uc008ygb.1_5end |
| EntrezGene: | Prdm8 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@Prdm8 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| CNS neuron (sensu Vertebrata) | 8.97e-18 | 23 |
| neuroblast (sensu Vertebrata) | 8.97e-18 | 23 |
| neuron | 8.02e-10 | 33 |
| neuronal stem cell | 8.02e-10 | 33 |
| neuroblast | 8.02e-10 | 33 |
| electrically signaling cell | 8.02e-10 | 33 |
| neuron of cerebral cortex | 1.83e-07 | 6 |
| electrically responsive cell | 3.75e-07 | 39 |
| electrically active cell | 3.75e-07 | 39 |
Showing 1 to 9 of 9 entries
| Ontology term | p-value | n |
|---|---|---|
| gray matter | 7.04e-25 | 34 |
| neurectoderm | 1.03e-23 | 64 |
| neural plate | 1.03e-23 | 64 |
| presumptive neural plate | 1.03e-23 | 64 |
| regional part of nervous system | 8.84e-22 | 54 |
| brain grey matter | 3.58e-21 | 29 |
| regional part of telencephalon | 3.58e-21 | 29 |
| telencephalon | 3.58e-21 | 29 |
| pre-chordal neural plate | 1.24e-20 | 49 |
| neural tube | 2.15e-20 | 52 |
Showing 1 to 10 of 42 entries
