Personal tools

FFCP PHASE1:Mm9::chr9:20807189..20807234,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{FFCP |id=chr9:20807189..20807234,+ |short_description=p3@Mrpl4 |description=CAGE_peak_3_at_Mrpl4_5end |association_with_transcript=8bp_to_ENSMUST00000003386,NM_023167,uc...")
 
No edit summary
 
(8 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr9:20807189..20807234,+
|DHSsupport=NA
|short_description=p3@Mrpl4
|DPIdataset=NA
|description=CAGE_peak_3_at_Mrpl4_5end
|association_with_transcript=8bp_to_ENSMUST00000003386,NM_023167,uc009oju.1,uc009ojv.1_5end
|EntrezGene=66163
|EntrezGene=66163
|HGNC=
|HGNC=
|MCL_coexpression_id=207
|TSSclassifier=NA
|UniProt=Q9DCU6
|UniProt=Q9DCU6
|association_with_transcript=8bp_to_ENSMUST00000003386,NM_023167,uc009oju.1,uc009ojv.1_5end
|cluster_id=chr9:20807189..20807234,+
|description=CAGE_peak_3_at_Mrpl4_5end
|id=chr9:20807189..20807234,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002368!4.57e-08!60;UBERON:0004119!1.10e-07!130;UBERON:0000925!1.10e-07!130;UBERON:0006595!1.10e-07!130;UBERON:0002530!1.35e-07!65;UBERON:0001007!2.63e-07!128;UBERON:0001555!2.63e-07!128;UBERON:0007026!2.63e-07!128;UBERON:0002405!3.46e-07!70;UBERON:0003929!4.27e-07!55;UBERON:0000490!7.15e-07!66;UBERON:0005911!7.16e-07!69
|ontology_enrichment_uberon_v019_2=UBERON:0004119,3.62e-09,118;UBERON:0000925,3.62e-09,118;UBERON:0006595,3.62e-09,118;UBERON:0001007,9.37e-09,116;UBERON:0001555,9.37e-09,116;UBERON:0007026,9.37e-09,116;UBERON:0002368,3.29e-08,60;UBERON:0004921,5.10e-08,114;UBERON:0002530,9.97e-08,65;UBERON:0003929,3.13e-07,55;UBERON:0000490,5.38e-07,66;UBERON:0005911,6.51e-07,69;UBERON:0005256,9.51e-07,45
|phase1_expression=2.24208385946712,16.7508195666893,23.2049612088663,16.030603199262,18.5331420080148,4.8684988854448,2.56973904655078,9.29687928779349,6.19470377467334,10.2988391581677,3.08192342805909,2.95156988282745,10.2720437958723,14.0746847894586,3.33109761815663,2.83465374345756,6.29605690315332,5.8360500591274,4.9361196098066,3.81950686618227,2.97651515528744,1.09220046320974,1.30599894569468,7.35965144849671,9.86459908588831,16.0784949952206,12.4920978886132,10.3426191689227,4.3705386474966,5.79669298447841,6.87364583031445,0,0.61506478758457,0,1.1554064790051,2.32728503501889,1.22501613757421,1.25559489221072,2.3440060335714,2.09409497589519,0.588231488031014,2.04913645487534,1.94204141212461,7.80560271448579,7.40051597902456,3.48738829107195,23.4717403304412,4.57852828398938,5.4921545683618,4.47188767870852,4.61955191363696,1.43752564364972,6.20795642413625,10.8804321301702,7.73015738027667,2.05807548828758,2.29226751951005,3.09403255366465,1.21389876515759,2.11596391708813,1.26766280701236,7.45457970552091,10.6715375533337,5.39939830368839,2.96659908770092,3.5524005747305,11.3848041996994,14.6002956022191,1.55534418462716,2.02508907497536,1.26194976810829,3.99911378165325,4.63823935998388,1.22490799214954,1.53352753629178,0,0,1.53224805702225,1.68967186581868,3.42904348098504,2.19570344645783,2.08365348222704,1.11673199600552,2.8138130501584,2.13917546887534,2.35702868378934,1.85083185038834,1.86399445825301,0.984440513331393,0.906858721281426,6.08715426273523,18.9293252935905,4.75979933595425,16.1910957491345,13.6453047664011,8.06448396775204,6.31999890592883,0.852151612890289,0.779358013808606,1.06001872353102,1.12674735821344,2.56652954828636,0,0,1.73192832808971,1.52015919285059,1.01104889002957,6.73684890342454,2.84831672011889,5.78924342352817,1.56136794089522,3.34912026143355,5.5347719341454,4.97384713823654,5.29149182110672,5.27799683584637,2.96633961281249,2.89198713839823,0.884610551949874,3.07357014900077,2.42925670306433,1.93950101254089,3.72783522436244,0.878342391034642,2.30391377494801,5.8755122697976,0.599075622529601,1.19980546198682,0.508280908292259,1.79748767285787,0.915001205637253,0.879580464790051,1.21677024134594,2.55715457330331,1.45451631191692,1.78465389374533,1.83310854930569,1.8661045591514,1.26361379216837,0.631325567659422,0.650602214813519,3.21862946206862,1.26043490863744,1.65775299619287,2.24520447199382,1.92170580427275,2.71735001223214,1.29351685369508,0.646703978798527,1.51284864134255,0.703804496655795,2.41115305670332,2.50242524303038,1.74126083261083,2.67516777330327,1.99034266818493,0,1.28673953557358,1.42081749697796,0.414251545071004,0.938104239924385,1.44049649168812,0.23674473558521,1.37734962223183,1.69693824176116,1.86027155800326,2.68273401399619,1.5179494507732,1.81015834904829,1.80584210487005,2.26992666728396,2.77779976108131,1.53685080703735,3.08674763148855,1.26173969138476,1.23485534855141,10.2429822724977,5.02456076660734,1.49301775374664,0.464473343720877,2.19074684247559,1.00841762311671,2.89091456998331,3.80451252225118,6.16887780007865,4.28217282282428,4.77536896720512,4.57599885694647,4.67913809085888,8.98819408654222,6.48414149624083,7.16908583715722,1.32767530667157,1.14248512609729,1.1270773567308,1.22190796707189,1.93952487167626,2.73529697572242,5.31186911843761,6.05201606716369,9.26292494264111,10.488758933353,17.1942523710546,3.33690211432188,3.14494392181125,3.37293168577281,2.84004169943904,2.65294875727659,3.31013607315846,2.30156909960649,1.62135226775035,4.66754402419738,1.43768206527355,5.20997326735905,7.48890415474945,8.84026072814891,10.0462551572271,11.5786445127208,3.51031061316549,0.757965647081939,0.977789858652155,1.69745085775188,2.34690248288502,4.52266895092903,3.80869825417622,3.70753930929818,1.89162172927429,0.664394068946325,2.23236676120482,5.73521601505083,6.04397436530635,6.50920763616802,0,2.71952841909355,2.45882136509518,1.10374698521893,2.40825884981688,0.937693492737625,1.14754461763673,3.7870639080656,2.2085575359138,1.95219372148319,2.80050417052639,2.15071918157297,1.11399337041197,1.69845918473299,2.83367491172426,3.21481443702443,3.16230222357219,0.963963949265421,1.84522110770749,2.31485284767432,2.28041743095006,1.64970122972535,3.98235415019888,1.69946445308487,0.906970670894253,2.26326095707078,1.47650946440386,1.53717573971964,2.58428293168221,0.727067458955011,0.356497378384721,1.58018378967908,5.27093042874994,3.09406629744561,7.14923172082955,1.44048875225048,2.58717367565509,2.57204442037911,3.19212420556092,4.10248280484762,4.27827453565514,6.08929898229199,3.52007562095566,3.81297727554876,3.96951116498931,1.31909002353184,2.42196640043858,2.17126529741361,2.02932984805332,2.79039529566604,4.95517422270746,1.29797711407357,2.22132145037209,2.06386867963222,2.40752885580625,3.01389531207506,1.6403307326523,2.97411625168479,1.5298058699447,1.6794174278839,2.21119958087078,2.86401185404534,0.474503990371703,1.21991680276109,1.62008011232702,3.13632444021703,1.52853794622324,0.809186078308924,2.39695021603474,1.04702376793612,2.46268449254406,3.10669656543463,1.12738587736838,4.9340460194513,5.46013018508422,4.4723773319131,4.52059382172059,3.54807863530634,2.46450201156083,2.47388331203505,1.78260885523708,0.483168241652012,0.864090018773596,3.47612232690996,4.05450430580328,2.36235201479103,1.29920822977795,1.25318686967237,2.38417625737518,3.00488623799922,2.06765338044408,1.61546319917036,2.13379058634,2.52065462842101,3.31356794515158,3.46362629905186,2.45441494581295,1.58711268530648,0.887943813496259,1.16628013592318,1.51096154727671,2.89784391048286,2.25218970541418,1.64836461840539,3.42989406526505,1.50471631210609,1.6942555278512,0.460325236507177,0.572895513439397,2.06223818812425,0.685082519770642,0,0,0,0.906284817968409,0.51776031175182,0.830298780673413,0.798049746802062,1.02440163452481,1.45864030240976,1.88651846365184,1.83843508450014,2.66696073361938,2.06035057238894,3.20919209591815,1.51618327058278,1.2673964994512,2.45214243801899,1.96647165686753,2.36893063898016,2.87177344778066,0.952587382566147,0.927074607558844,1.15745532278223,3.70877310722976,1.61918812147837,1.71434626192708,2.8396128985494,1.66905332963125,2.0348498328526,1.41164070622996,1.94613598150856,1.28049581010941,1.8414879800649,2.71608227691724,1.12228454331548,1.66089025373844,2.46261205938909,1.22769312950907,2.47898945897546,1.54325288784913,2.24829520144151,2.8071793013449,3.22306581072447,3.82576664137687,4.85301122062934,2.08681052058379
|phase1_expression=2.24208385946712,16.7508195666893,23.2049612088663,16.030603199262,18.5331420080148,4.8684988854448,2.56973904655078,9.29687928779349,6.19470377467334,10.2988391581677,3.08192342805909,2.95156988282745,10.2720437958723,14.0746847894586,3.33109761815663,2.83465374345756,6.29605690315332,5.8360500591274,4.9361196098066,3.81950686618227,2.97651515528744,1.09220046320974,1.30599894569468,7.35965144849671,9.86459908588831,16.0784949952206,12.4920978886132,10.3426191689227,4.3705386474966,5.79669298447841,6.87364583031445,0,0.61506478758457,0,1.1554064790051,2.32728503501889,1.22501613757421,1.25559489221072,2.3440060335714,2.09409497589519,0.588231488031014,2.04913645487534,1.94204141212461,7.80560271448579,7.40051597902456,3.48738829107195,23.4717403304412,4.57852828398938,5.4921545683618,4.47188767870852,4.61955191363696,1.43752564364972,6.20795642413625,10.8804321301702,7.73015738027667,2.05807548828758,2.29226751951005,3.09403255366465,1.21389876515759,2.11596391708813,1.26766280701236,7.45457970552091,10.6715375533337,5.39939830368839,2.96659908770092,3.5524005747305,11.3848041996994,14.6002956022191,1.55534418462716,2.02508907497536,1.26194976810829,3.99911378165325,4.63823935998388,1.22490799214954,1.53352753629178,0,0,1.53224805702225,1.68967186581868,3.42904348098504,2.19570344645783,2.08365348222704,1.11673199600552,2.8138130501584,2.13917546887534,2.35702868378934,1.85083185038834,1.86399445825301,0.984440513331393,0.906858721281426,6.08715426273523,18.9293252935905,4.75979933595425,16.1910957491345,13.6453047664011,8.06448396775204,6.31999890592883,0.852151612890289,0.779358013808606,1.06001872353102,1.12674735821344,2.56652954828636,0,0,1.73192832808971,1.52015919285059,1.01104889002957,6.73684890342454,2.84831672011889,5.78924342352817,1.56136794089522,3.34912026143355,5.5347719341454,4.97384713823654,5.29149182110672,5.27799683584637,2.96633961281249,2.89198713839823,0.884610551949874,3.07357014900077,2.42925670306433,1.93950101254089,3.72783522436244,0.878342391034642,2.30391377494801,5.8755122697976,0.599075622529601,1.19980546198682,0.508280908292259,1.79748767285787,0.915001205637253,0.879580464790051,1.21677024134594,2.55715457330331,1.45451631191692,1.78465389374533,1.83310854930569,1.8661045591514,1.26361379216837,0.631325567659422,0.650602214813519,3.21862946206862,1.26043490863744,1.65775299619287,2.24520447199382,1.92170580427275,2.71735001223214,1.29351685369508,0.646703978798527,1.51284864134255,0.703804496655795,2.41115305670332,2.50242524303038,1.74126083261083,2.67516777330327,1.99034266818493,0,1.28673953557358,1.42081749697796,0.414251545071004,0.938104239924385,1.44049649168812,0.23674473558521,1.37734962223183,1.69693824176116,1.86027155800326,2.68273401399619,1.5179494507732,1.81015834904829,1.80584210487005,2.26992666728396,2.77779976108131,1.53685080703735,3.08674763148855,1.26173969138476,1.23485534855141,10.2429822724977,5.02456076660734,1.49301775374664,0.464473343720877,2.19074684247559,1.00841762311671,2.89091456998331,3.80451252225118,6.16887780007865,4.28217282282428,4.77536896720512,4.57599885694647,4.67913809085888,8.98819408654222,6.48414149624083,7.16908583715722,1.32767530667157,1.14248512609729,1.1270773567308,1.22190796707189,1.93952487167626,2.73529697572242,5.31186911843761,6.05201606716369,9.26292494264111,10.488758933353,17.1942523710546,3.33690211432188,3.14494392181125,3.37293168577281,2.84004169943904,2.65294875727659,3.31013607315846,2.30156909960649,1.62135226775035,4.66754402419738,1.43768206527355,5.20997326735905,7.48890415474945,8.84026072814891,10.0462551572271,11.5786445127208,3.51031061316549,0.757965647081939,0.977789858652155,1.69745085775188,2.34690248288502,4.52266895092903,3.80869825417622,3.70753930929818,1.89162172927429,0.664394068946325,2.23236676120482,5.73521601505083,6.04397436530635,6.50920763616802,0,2.71952841909355,2.45882136509518,1.10374698521893,2.40825884981688,0.937693492737625,1.14754461763673,3.7870639080656,2.2085575359138,1.95219372148319,2.80050417052639,2.15071918157297,1.11399337041197,1.69845918473299,2.83367491172426,3.21481443702443,3.16230222357219,0.963963949265421,1.84522110770749,2.31485284767432,2.28041743095006,1.64970122972535,3.98235415019888,1.69946445308487,0.906970670894253,2.26326095707078,1.47650946440386,1.53717573971964,2.58428293168221,0.727067458955011,0.356497378384721,1.58018378967908,5.27093042874994,3.09406629744561,7.14923172082955,1.44048875225048,2.58717367565509,2.57204442037911,3.19212420556092,4.10248280484762,4.27827453565514,6.08929898229199,3.52007562095566,3.81297727554876,3.96951116498931,1.31909002353184,2.42196640043858,2.17126529741361,2.02932984805332,2.79039529566604,4.95517422270746,1.29797711407357,2.22132145037209,2.06386867963222,2.40752885580625,3.01389531207506,1.6403307326523,2.97411625168479,1.5298058699447,1.6794174278839,2.21119958087078,2.86401185404534,0.474503990371703,1.21991680276109,1.62008011232702,3.13632444021703,1.52853794622324,0.809186078308924,2.39695021603474,1.04702376793612,2.46268449254406,3.10669656543463,1.12738587736838,4.9340460194513,5.46013018508422,4.4723773319131,4.52059382172059,3.54807863530634,2.46450201156083,2.47388331203505,1.78260885523708,0.483168241652012,0.864090018773596,3.47612232690996,4.05450430580328,2.36235201479103,1.29920822977795,1.25318686967237,2.38417625737518,3.00488623799922,2.06765338044408,1.61546319917036,2.13379058634,2.52065462842101,3.31356794515158,3.46362629905186,2.45441494581295,1.58711268530648,0.887943813496259,1.16628013592318,1.51096154727671,2.89784391048286,2.25218970541418,1.64836461840539,3.42989406526505,1.50471631210609,1.6942555278512,0.460325236507177,0.572895513439397,2.06223818812425,0.685082519770642,0,0,0,0.906284817968409,0.51776031175182,0.830298780673413,0.798049746802062,1.02440163452481,1.45864030240976,1.88651846365184,1.83843508450014,2.66696073361938,2.06035057238894,3.20919209591815,1.51618327058278,1.2673964994512,2.45214243801899,1.96647165686753,2.36893063898016,2.87177344778066,0.952587382566147,0.927074607558844,1.15745532278223,3.70877310722976,1.61918812147837,1.71434626192708,2.8396128985494,1.66905332963125,2.0348498328526,1.41164070622996,1.94613598150856,1.28049581010941,1.8414879800649,2.71608227691724,1.12228454331548,1.66089025373844,2.46261205938909,1.22769312950907,2.47898945897546,1.54325288784913,2.24829520144151,2.8071793013449,3.22306581072447,3.82576664137687,4.85301122062934,2.08681052058379
|short_description=p3@Mrpl4
}}
}}

Latest revision as of 10:57, 26 September 2015

Short description:p3@Mrpl4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Mrpl4_5end
Coexpression cluster:MCL_coexpression_mm9:207
Association with transcript: 8bp_to_ENSMUST00000003386, NM_023167, uc009oju.1, uc009ojv.1_5end
EntrezGene:Mrpl4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Mrpl4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.24
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I516.75
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I623.20
CD326+ enterocyte, pool1.CNhs13542.11848-124I316.03
CD326+ enterocyte, pool2.CNhs13197.11849-124I418.53
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I74.87
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.57
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E99.30
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E76.19
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F210.30
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E63.08
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F12.95
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E410.27
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E814.07
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A13.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A32.83
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A56.30
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A25.84
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A44.94
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A63.82
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.98
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.09
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.31
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D17.36
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D29.86
GP2+ M cell, pool1.CNhs13228.11845-124H916.08
GP2+ M cell, pool2.CNhs13231.11846-124I112.49
GP2+ M cell, pool3.CNhs13240.11847-124I210.34
Ileum epithelium, pool1.CNhs13199.10252-104B94.37
Ileum epithelium, pool2.CNhs13232.10253-104C15.80
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C86.87
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.16
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F62.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.23
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.26
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H12.34
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H32.09
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41.94
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D87.81
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D97.40
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B33.49
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B723.47
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C24.58
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B85.49
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C34.47
Mouse Astrocytes, donor2.CNhs12078.11552-120C44.62
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A26.21
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I910.88
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A17.73
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.06
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C53.09
Mouse Granule cells, donor1.CNhs12131.11713-123C31.21
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C67.45
Mouse Meningeal cells, donor3.CNhs12109.11639-122D110.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C75.40
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E72.97
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D23.55
Mouse Microglia, donor1.CNhs12629.11718-123C811.38
Mouse Microglia, donor2.CNhs12634.11736-123E814.60
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.56
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.03
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.26
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.64
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.22
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.53
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.53
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.69
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.43
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.20
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.12
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.81
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.14
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.36
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.86
Mouse Schwann, donor1.CNhs12507.11728-123D90.98
Mouse Schwann, donor2.CNhs12573.11746-123F90.91
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G36.09
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F718.93
Mouse hepatocyte, donor1.CNhs13078.11714-123C44.76
Mouse hepatocyte, donor3.CNhs12615.11637-122C816.19
Mouse hepatocyte, donor6.CNhs13090.11822-124F413.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F68.06
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A76.32
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.85
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.06
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.13
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.73
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.52
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B66.74
accessory axillary lymph node, adult.CNhs10475.1063-29H92.85
adrenal gland, adult.CNhs10508.49-24D75.79
adrenal gland, embryo E14.CNhs11038.406-44C51.56
adrenal gland, embryo E16.CNhs11004.1254-43D63.35
adrenal gland, embryo E17.CNhs11043.1263-45I15.53
adrenal gland, embryo E18.CNhs11026.1262-18F54.97
adrenal gland, neonate N00.CNhs11191.1311-23C15.29
adrenal gland, neonate N25.CNhs11223.1377-27I35.28
amnion, adult pregnant day17.5.CNhs10488.583-22A82.97
aorta, adult.CNhs10498.46-23H12.89
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F53.07
bone (os femoris), neonate N16.CNhs11225.1525-43A62.43
bone (os femoris), neonate N20.CNhs11195.1350-25C31.94
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I22.30
colon, adult.CNhs10468.36-18H75.88
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.60
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.51
corpora quadrigemina, adult.CNhs10501.16-22A41.80
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F10.88
cortex, adult.CNhs10473.12-14D51.22
cortex, neonate N30.CNhs11107.1392-42F22.56
diencephalon, adult.CNhs10482.20-12F21.45
diencephalon, neonate N30.CNhs11201.1388-42B21.78
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.83
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.87
epididymis, adult.CNhs10490.58-23B21.26
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C60.65
eyeball, embryo E14.CNhs10521.399-16E23.22
eyeball, embryo E15.CNhs10593.426-16C91.26
eyeball, embryo E17.CNhs11023.1261-18D41.66
eyeball, neonate N00.CNhs11207.633-15C62.25
eyeball, neonate N01.CNhs11140.1532-43E71.92
eyeball, neonate N02.CNhs11205.1551-44G82.72
eyeball, neonate N16.CNhs11188.777-19A21.29
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H21.51
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A82.41
forelimb, embryo E15.CNhs11007.437-20E72.50
forelimb, embryo E17.CNhs10598.1517-43C41.74
forelimb, embryo E18.CNhs11008.1520-43B52.68
gonad, embryo E13.CNhs11044.1564-45I61.99
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.29
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.42
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I91.44
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C81.38
heart, embryo E16.CNhs11021.457-17C61.70
heart, embryo E17.CNhs11025.479-18E51.86
heart, embryo E18.CNhs11030.1283-20G32.68
heart, neonate N00.CNhs11213.639-21E31.52
heart, neonate N03.CNhs11221.1349-25I21.81
heart, neonate N10.CNhs11118.749-24G11.81
heart, neonate N16.CNhs11209.782-15G12.27
heart, neonate N20.CNhs11127.821-26I62.78
heart, neonate N25.CNhs11196.1351-25D31.54
heart, neonate N30.CNhs11202.1390-42D23.09
hippocampus, adult.CNhs10478.13-16E81.26
hippocampus, neonate N00.CNhs11228.627-43G11.23
intestinal mucosa, adult.CNhs10506.860-29I310.24
intestine, adult.CNhs10496.178-9A35.02
intestine, embryo E12.CNhs11019.1251-16I51.49
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D82.19
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D32.89
intestine, embryo E18.CNhs10526.1289-20F73.80
intestine, neonate N00.CNhs11126.644-26D16.17
intestine, neonate N01.CNhs11192.1322-23E94.28
intestine, neonate N06.CNhs11102.688-20B84.78
intestine, neonate N07.CNhs11095.720-20F24.58
intestine, neonate N10.CNhs11098.755-23A54.68
intestine, neonate N20.CNhs11187.827-18D18.99
intestine, neonate N25.CNhs11121.1352-25E36.48
intestine, neonate N30.CNhs11131.1384-42G17.17
kidney, embryo E14.CNhs10606.411-4I91.33
kidney, embryo E15.CNhs10997.434-16F81.14
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.22
kidney, embryo E18.CNhs11001.1288-20C71.94
kidney, neonate N00.CNhs11214.646-21G72.74
kidney, neonate N10.CNhs11206.758-6D55.31
kidney, neonate N20.CNhs11113.832-19I16.05
kidney, neonate N25.CNhs11122.1353-25F39.26
kidney, neonate N30.CNhs11203.1385-42H110.49
liver, adult pregnant day01.CNhs10466.508-5B217.19
liver, embryo E12.CNhs10601.355-15F83.34
liver, embryo E13.CNhs10524.378-3H63.14
liver, embryo E14.CNhs10594.409-16E13.37
liver, embryo E15.CNhs10520.433-16D72.84
liver, embryo E16.CNhs10523.462-17F52.65
liver, embryo E17.CNhs10510.481-18A33.31
liver, embryo E18.CNhs10579.499-43G42.30
liver, neonate N00.CNhs11117.641-24F41.62
liver, neonate N03.CNhs11123.1345-25G24.67
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H25.21
liver, neonate N10.CNhs11115.751-24B97.49
liver, neonate N20.CNhs11220.823-25A38.84
liver, neonate N25.CNhs11198.1368-26H110.05
liver, neonate N30.CNhs11106.1382-42D111.58
lung, adult.CNhs10474.28-22B13.51
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F80.98
lung, embryo E15.CNhs11020.432-17C51.70
lung, embryo E16.CNhs10998.458-17B62.35
lung, embryo E17.CNhs10605.480-44A64.52
lung, embryo E18.CNhs10583.1287-20I63.81
lung, neonate N00.CNhs11224.640-42C63.71
lung, neonate N06.CNhs11212.683-20E51.89
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E62.23
lung, neonate N20.CNhs11109.822-18A45.74
lung, neonate N25.CNhs11119.1359-25C76.04
lung, neonate N30.CNhs11133.1394-42H26.51
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.72
mammary gland, adult lactating day02.CNhs10480.595-22B62.46
mammary gland, adult pregnant day19.CNhs10476.588-5H21.10
medulla oblongata, adult.CNhs10477.17-12C22.41
medulla oblongata, neonate N30.CNhs11200.1396-42A30.94
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.15
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.79
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.21
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.95
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.80
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.15
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.11
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.70
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.83
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.21
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.16
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I71.85
ovary, embryo E18.CNhs11040.505-44H72.31
ovary, neonate N00.CNhs11217.1299-22I42.28
oviduct, adult pregnant day01.CNhs10500.988-6G61.65
pancreas, adult.CNhs10486.34-16E43.98
pancreas, embryo E14.CNhs11012.405-44F41.70
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E52.26
pancreas, embryo E17.CNhs10599.1558-45G31.48
pancreas, embryo E18.CNhs10580.1535-43I71.54
pancreas, neonate N00.CNhs11105.645-26G92.58
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B61.58
pancreas, neonate N25.CNhs11094.1555-45E25.27
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G87.15
pituitary gland, embryo E12.CNhs11018.346-16E61.44
pituitary gland, embryo E13.CNhs11009.370-44C72.59
pituitary gland, embryo E14.CNhs11037.398-44A52.57
pituitary gland, embryo E15.CNhs10592.427-16B93.19
pituitary gland, embryo E16.CNhs11036.449-43F64.10
pituitary gland, embryo E17.CNhs11039.1265-44F54.28
pituitary gland, neonate N00.CNhs11190.1308-22E96.09
placenta, adult pregnant day10.CNhs10472.539-13I73.52
placenta, adult pregnant day17.CNhs10464.577-18G33.81
prostate, adult.CNhs10470.859-1F83.97
skin, adult.CNhs10492.30-1C31.32
skin, neonate N00.CNhs11124.650-25G42.42
skin, neonate N03.CNhs11215.662-22H32.17
skin, neonate N06.CNhs11097.693-20I52.03
skin, neonate N10.CNhs11108.762-6C42.79
small intestine, neonate N16.CNhs11114.790-21I14.96
spinal cord, adult.CNhs10505.24-13C91.30
spleen, adult.CNhs10465.25-2G22.22
spleen, embryo E16.CNhs11035.461-43C12.06
spleen, embryo E18.CNhs11011.1271-21F22.41
spleen, neonate N10.CNhs11116.752-24D13.01
spleen, neonate N20.CNhs11112.824-19H11.64
spleen, neonate N25.CNhs11099.1354-25G32.97
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.53
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.21
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G81.22
stomach, embryo E16.CNhs11022.459-17D41.62
stomach, embryo E17.CNhs11006.1035-18D53.14
stomach, embryo E18.CNhs10999.1286-20C61.53
stomach, neonate N03.CNhs11193.1340-24B80.81
stomach, neonate N07.CNhs11210.718-18A92.40
stomach, neonate N25.CNhs11104.1355-25E41.05
stomach, neonate N30.CNhs11134.1386-42I12.46
submandibular gland, adult.CNhs10469.59-29C13.11
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F54.93
testis, embryo E15.CNhs11034.443-27C55.46
testis, embryo E16.CNhs11033.470-26G54.47
testis, embryo E17.CNhs11029.486-18I54.52
testis, embryo E18.CNhs11027.503-18G53.55
testis, neonate N00.CNhs11189.1300-22B72.46
testis, neonate N07.CNhs11222.726-26I42.47
testis, neonate N10.CNhs11204.763-44D91.78
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B53.48
thymus, embryo E14.CNhs11041.402-44I44.05
thymus, embryo E15.CNhs11005.430-45I22.36
thymus, embryo E16.CNhs11002.456-26C51.30
thymus, embryo E17.CNhs10581.478-18C11.25
thymus, embryo E18.CNhs10595.1273-19G42.38
thymus, neonate N02.CNhs11181.1541-43F83.00
thymus, neonate N03.CNhs11137.2104-43C72.07
thymus, neonate N06.CNhs11197.681-26C41.62
thymus, neonate N07.CNhs11211.713-19D32.13
thymus, neonate N10.CNhs11194.748-24E42.52
thymus, neonate N20.CNhs11186.820-7A23.31
thymus, neonate N25.CNhs11125.1362-25G73.46
thymus, neonate N30.CNhs11132.1393-42G22.45
tongue, adult.CNhs10499.32-1B41.59
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.89
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.17
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.51
urinary bladder, adult.CNhs10481.879-12E42.90
uterus, adult pregnant day19.CNhs10497.590-15F52.25
uterus, adult.CNhs10509.92-27E51.65
vagina, adult.CNhs10502.89-27D53.43
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.06
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.83
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H21.02
whole body, embryo E14.5.CNhs10578.420-27D21.46
whole body, embryo E14.CNhs10519.395-14B11.89
whole body, embryo E16.CNhs10514.453-14F21.84
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.21
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.45
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.97
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.87
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.62
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.84
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.41
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.95
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.72
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.66
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.48
whole body, embryo E17.5.CNhs10513.490-9F91.54
whole body, embryo E17.CNhs10517.475-3I52.25
whole body, embryo E18.CNhs10516.493-3B32.81
whole body, neonate N00.CNhs10525.657-19C23.22
whole body, neonate N01.CNhs10576.659-23C63.83
whole body, neonate N06.CNhs10515.692-21D14.85
whole body, neonate N10.CNhs10518.761-6B42.09





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
endoderm-derived structure3.62e-09118
endoderm3.62e-09118
presumptive endoderm3.62e-09118
digestive system9.37e-09116
digestive tract9.37e-09116
primitive gut9.37e-09116
endocrine gland3.29e-0860
subdivision of digestive tract5.10e-08114
gland9.97e-0865
gut epithelium3.13e-0755
unilaminar epithelium5.38e-0766
endo-epithelium6.51e-0769
trunk mesenchyme9.51e-0745
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr9:20807189..20807234,%2B&oldid=4249844"