FFCP PHASE1:Mm9::chr1:137815919..137815930,-: Difference between revisions
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{{FFCP|EntrezGene=18772|HGNC=|MCL_coexpression_id=75|UniProt=P97350|association_with_transcript=-135bp_to_ENSMUST00000027667_5end|description=CAGE_peak_6_at_Pkp1_5end|id=chr1:137815919..137815930,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000072!1.63e-08!27;UBERON:0000014!6.95e-08!5;UBERON:0001003!6.95e-08!5;UBERON:0002097!6.95e-08!5;UBERON:0002199!6.95e-08!5;UBERON:0007029!6.95e-08!5;UBERON:0007376!6.95e-08!5;UBERON:0002416!6.95e-08!5;UBERON:0007383!6.95e-08!5;UBERON:0003102!8.89e-08!23|ontology_enrichment_uberon_v019_2=UBERON:0000014,2.70e-24,5;UBERON:0001003,2.70e-24,5;UBERON:0002097,2.70e-24,5;UBERON:0002199,2.70e-24,5;UBERON:0007029,2.70e-24,5;UBERON:0007376,2.70e-24,5;UBERON:0002416,2.70e-24,5;UBERON:0007383,2.70e-24,5;UBERON:0003102,7.29e-21,22;UBERON:0002102,9.50e-07,7;UBERON:0004710,9.50e-07,7;UBERON:0005419,9.50e-07,7;UBERON:0005417,9.50e-07,7;UBERON:0005729,9.50e-07,7|phase1_expression=0,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0.42438965179803,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0.866554859253824,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0.865964164044856,0.760079596425296,0.505524445014783,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.124406970610093,0,0,0,0,0.180062129805349,0.150704817835715,0.0680364991513279,0,0,0,0,0,0.703804496655795,0.657587197282725,1.66828349535359,4.179025998266,5.96768195583036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.11147384118588,3.71368181400583,4.16159182004275,3.9392873521035,6.07321329056727,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.324016022465404,0.627264888043406,0.436725127492355,0.809186078308924,0.330613822901344,0.523511883968059,0.129614973291793,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0.948033361884535,0,1.43795340030758,2.20865399062252,0.358053391334963,0.198681354781265,0.480781798079875,1.18151621739662,0.302899349844443,0.304827226619999,0.403304740547362,0.682205165178267,0.288635524920988,0.584384510907845,10.2028672626845,0,0,0,0,0,0.36630324853453,13.9339446401393,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341467211508268,0,0.419226325255965,0.735374033800057,0,0.412070114477788,0.320919209591815,0.505394423527595,1.52087579934144,0.943131706930381,0.37456602987953,0.576226371643824,0.229741875822453,0.952587382566147,0,0,0,0.147198920134397,0.342869252385415,0.887379030796687,0.715308569841963,1.30811774969096,0.658765662907314,1.18460451048347,0.548783918618318,0,0,0.561142271657738,0.830445126869219,0.591026894253381,0.409231043169689,0.464810523557898,1.73615949883027,0.749431733813838,1.40358965067245,1.50409737833809,0.57386499620653,0.661774257358546,0|short_description=p6@Pkp1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=18772 | |||
|HGNC= | |||
|MCL_coexpression_id=75 | |||
|TSSclassifier=NA | |||
|UniProt=P97350 | |||
|association_with_transcript=-135bp_to_ENSMUST00000027667_5end | |||
|cluster_id=chr1:137815919..137815930,- | |||
|description=CAGE_peak_6_at_Pkp1_5end | |||
|id=chr1:137815919..137815930,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000072!1.63e-08!27;UBERON:0000014!6.95e-08!5;UBERON:0001003!6.95e-08!5;UBERON:0002097!6.95e-08!5;UBERON:0002199!6.95e-08!5;UBERON:0007029!6.95e-08!5;UBERON:0007376!6.95e-08!5;UBERON:0002416!6.95e-08!5;UBERON:0007383!6.95e-08!5;UBERON:0003102!8.89e-08!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000014,2.70e-24,5;UBERON:0001003,2.70e-24,5;UBERON:0002097,2.70e-24,5;UBERON:0002199,2.70e-24,5;UBERON:0007029,2.70e-24,5;UBERON:0007376,2.70e-24,5;UBERON:0002416,2.70e-24,5;UBERON:0007383,2.70e-24,5;UBERON:0003102,7.29e-21,22;UBERON:0002102,9.50e-07,7;UBERON:0004710,9.50e-07,7;UBERON:0005419,9.50e-07,7;UBERON:0005417,9.50e-07,7;UBERON:0005729,9.50e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0.42438965179803,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0.866554859253824,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0.865964164044856,0.760079596425296,0.505524445014783,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.124406970610093,0,0,0,0,0.180062129805349,0.150704817835715,0.0680364991513279,0,0,0,0,0,0.703804496655795,0.657587197282725,1.66828349535359,4.179025998266,5.96768195583036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.11147384118588,3.71368181400583,4.16159182004275,3.9392873521035,6.07321329056727,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.324016022465404,0.627264888043406,0.436725127492355,0.809186078308924,0.330613822901344,0.523511883968059,0.129614973291793,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0.948033361884535,0,1.43795340030758,2.20865399062252,0.358053391334963,0.198681354781265,0.480781798079875,1.18151621739662,0.302899349844443,0.304827226619999,0.403304740547362,0.682205165178267,0.288635524920988,0.584384510907845,10.2028672626845,0,0,0,0,0,0.36630324853453,13.9339446401393,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341467211508268,0,0.419226325255965,0.735374033800057,0,0.412070114477788,0.320919209591815,0.505394423527595,1.52087579934144,0.943131706930381,0.37456602987953,0.576226371643824,0.229741875822453,0.952587382566147,0,0,0,0.147198920134397,0.342869252385415,0.887379030796687,0.715308569841963,1.30811774969096,0.658765662907314,1.18460451048347,0.548783918618318,0,0,0.561142271657738,0.830445126869219,0.591026894253381,0.409231043169689,0.464810523557898,1.73615949883027,0.749431733813838,1.40358965067245,1.50409737833809,0.57386499620653,0.661774257358546,0 | |||
|short_description=p6@Pkp1 | |||
}} |
Latest revision as of 11:08, 26 September 2015
Short description: | p6@Pkp1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Pkp1_5end |
Coexpression cluster: | MCL_coexpression_mm9:75 |
Association with transcript: | -135bp_to_ENSMUST00000027667_5end |
EntrezGene: | Pkp1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
zone of skin | 2.70e-24 | 5 |
skin epidermis | 2.70e-24 | 5 |
skin of body | 2.70e-24 | 5 |
integument | 2.70e-24 | 5 |
surface | 2.70e-24 | 5 |
outer epithelium | 2.70e-24 | 5 |
integumental system | 2.70e-24 | 5 |
enveloping layer of ectoderm | 2.70e-24 | 5 |
surface structure | 7.29e-21 | 22 |
forelimb | 9.50e-07 | 7 |
pectoral appendage | 9.50e-07 | 7 |
pectoral appendage bud | 9.50e-07 | 7 |
forelimb bud | 9.50e-07 | 7 |
forelimb/pectoral fin field | 9.50e-07 | 7 |