FFCP PHASE2:Mm9::chr10:88996274..88996286,-: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
(Created page with "{{FFCP |DHSsupport=NA |DPIdataset=NA |EntrezGene=entrezgene:20186 |HGNC= |MCL_coexpression_id=8 |TSSclassifier=NA |UniProt=uniprot:D3YTT2 |association_with_transcript=43bp_to_...") |
No edit summary |
||
Line 2: | Line 2: | ||
|DHSsupport=NA | |DHSsupport=NA | ||
|DPIdataset=NA | |DPIdataset=NA | ||
|EntrezGene= | |EntrezGene=20186 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=8 | |MCL_coexpression_id=8 | ||
|TSSclassifier=NA | |TSSclassifier=NA | ||
|UniProt= | |UniProt=D3YTT2 | ||
|association_with_transcript=43bp_to_ENSMUST00000105297_5end | |association_with_transcript=43bp_to_ENSMUST00000105297_5end | ||
|cluster_id=chr10:88996274..88996286,- | |cluster_id=chr10:88996274..88996286,- |
Latest revision as of 13:46, 26 September 2015
Short description: | p4@Nr1h4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Nr1h4_5end |
Coexpression cluster: | MCL_coexpression_mm9:8 |
Association with transcript: | 43bp_to_ENSMUST00000105297_5end |
EntrezGene: | Nr1h4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p4@Nr1h4 |
---|
0
5
10
15
20
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 7.92e-12 | 5 |
cardiocyte | 5.52e-07 | 3 |
striated muscle cell | 5.52e-07 | 3 |
cardiac muscle cell | 5.52e-07 | 3 |
cardiac muscle myoblast | 5.52e-07 | 3 |
Showing 1 to 5 of 5 entries
Ontology term | p-value | n |
---|---|---|
trunk mesenchyme | 1.31e-33 | 45 |
liver | 1.29e-30 | 22 |
epithelial sac | 1.29e-30 | 22 |
digestive gland | 1.29e-30 | 22 |
epithelium of foregut-midgut junction | 1.29e-30 | 22 |
anatomical boundary | 1.29e-30 | 22 |
hepatobiliary system | 1.29e-30 | 22 |
foregut-midgut junction | 1.29e-30 | 22 |
hepatic diverticulum | 1.29e-30 | 22 |
liver primordium | 1.29e-30 | 22 |
Showing 1 to 10 of 37 entries