FFCP PHASE1:Mm9::chr4:140954649..140954661,-: Difference between revisions
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{{FFCP|EntrezGene=12733|HGNC=|MCL_coexpression_id=11|UniProt=Q9WUB7|association_with_transcript=-10bp_to_ENSMUST00000042617_5end|description=CAGE_peak_2_at_Clcnka_5end|id=chr4:140954649..140954661,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002113!1.57e-27!14;UBERON:0003918!1.57e-27!14;UBERON:0005095!1.57e-27!14;UBERON:0007687!1.57e-27!14;UBERON:0006554!7.96e-24!16;UBERON:0001008!2.67e-22!17;UBERON:0000489!1.20e-17!21;UBERON:0005172!1.23e-07!49;UBERON:0005173!1.23e-07!49;UBERON:0002417!1.23e-07!49;UBERON:0000916!1.23e-07!49;UBERON:0003103!1.55e-07!43|ontology_enrichment_uberon_v019_2=UBERON:0002113,8.75e-31,14;UBERON:0003918,8.75e-31,14;UBERON:0011143,8.75e-31,14;UBERON:0005095,8.75e-31,14;UBERON:0007687,8.75e-31,14;UBERON:0006554,6.33e-24,18;UBERON:0001008,1.17e-22,19;UBERON:0000489,1.73e-20,21;UBERON:0003103,6.97e-10,43;UBERON:0005172,1.24e-08,49;UBERON:0005173,1.24e-08,49;UBERON:0002417,1.24e-08,49;UBERON:0000916,1.24e-08,49;UBERON:0003104,7.35e-07,61;UBERON:0009142,7.35e-07,61|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53077922271926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12355536105401,0,0,0,0.14084341977668,0,0,0,0,0,0,1.48439043634778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0.150704817835715,0.0680364991513279,0,0,0,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379335801906163,0.114248512609729,1.1270773567308,0.610953983535943,1.74557238450863,3.36651935473529,3.73095569033118,11.2183712464498,11.1469096767376,15.9182341459123,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325773918707152,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.128050304809739,0.0574354689556133,0,0.115884325944855,0,0,0.147198920134397,0,0,0,0,0,0,0,0.263069711437843,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0|short_description=p2@Clcnka}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=12733 | |||
|HGNC= | |||
|MCL_coexpression_id=11 | |||
|TSSclassifier=NA | |||
|UniProt=Q9WUB7 | |||
|association_with_transcript=-10bp_to_ENSMUST00000042617_5end | |||
|cluster_id=chr4:140954649..140954661,- | |||
|description=CAGE_peak_2_at_Clcnka_5end | |||
|id=chr4:140954649..140954661,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002113!1.57e-27!14;UBERON:0003918!1.57e-27!14;UBERON:0005095!1.57e-27!14;UBERON:0007687!1.57e-27!14;UBERON:0006554!7.96e-24!16;UBERON:0001008!2.67e-22!17;UBERON:0000489!1.20e-17!21;UBERON:0005172!1.23e-07!49;UBERON:0005173!1.23e-07!49;UBERON:0002417!1.23e-07!49;UBERON:0000916!1.23e-07!49;UBERON:0003103!1.55e-07!43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,8.75e-31,14;UBERON:0003918,8.75e-31,14;UBERON:0011143,8.75e-31,14;UBERON:0005095,8.75e-31,14;UBERON:0007687,8.75e-31,14;UBERON:0006554,6.33e-24,18;UBERON:0001008,1.17e-22,19;UBERON:0000489,1.73e-20,21;UBERON:0003103,6.97e-10,43;UBERON:0005172,1.24e-08,49;UBERON:0005173,1.24e-08,49;UBERON:0002417,1.24e-08,49;UBERON:0000916,1.24e-08,49;UBERON:0003104,7.35e-07,61;UBERON:0009142,7.35e-07,61 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53077922271926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12355536105401,0,0,0,0.14084341977668,0,0,0,0,0,0,1.48439043634778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0.150704817835715,0.0680364991513279,0,0,0,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379335801906163,0.114248512609729,1.1270773567308,0.610953983535943,1.74557238450863,3.36651935473529,3.73095569033118,11.2183712464498,11.1469096767376,15.9182341459123,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325773918707152,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.128050304809739,0.0574354689556133,0,0.115884325944855,0,0,0.147198920134397,0,0,0,0,0,0,0,0.263069711437843,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | |||
|short_description=p2@Clcnka | |||
}} |
Latest revision as of 15:24, 26 September 2015
Short description: | p2@Clcnka |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Clcnka_5end |
Coexpression cluster: | MCL_coexpression_mm9:11 |
Association with transcript: | -10bp_to_ENSMUST00000042617_5end |
EntrezGene: | Clcnka |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney | 8.75e-31 | 14 |
kidney mesenchyme | 8.75e-31 | 14 |
upper urinary tract | 8.75e-31 | 14 |
kidney rudiment | 8.75e-31 | 14 |
kidney field | 8.75e-31 | 14 |
urinary system structure | 6.33e-24 | 18 |
renal system | 1.17e-22 | 19 |
cavitated compound organ | 1.73e-20 | 21 |
compound organ | 6.97e-10 | 43 |
abdomen element | 1.24e-08 | 49 |
abdominal segment element | 1.24e-08 | 49 |
abdominal segment of trunk | 1.24e-08 | 49 |
abdomen | 1.24e-08 | 49 |
mesenchyme | 7.35e-07 | 61 |
entire embryonic mesenchyme | 7.35e-07 | 61 |