FFCP PHASE1:Mm9::chr6:124865590..124865633,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=69202 | |EntrezGene=69202 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=88 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-43bp_to_ENSMUST00000134916_5end | |association_with_transcript=-43bp_to_ENSMUST00000134916_5end | ||
|cluster_id=chr6:124865590..124865633,- | |||
|description=CAGE_peak_3_at_Ptms_5end | |description=CAGE_peak_3_at_Ptms_5end | ||
|id=chr6:124865590..124865633,- | |id=chr6:124865590..124865633,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.41e-08,23;CL:0000337,1.41e-08,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.50e-09!43;UBERON:0000033!6.32e-09!63;UBERON:0002616!6.87e-08!49;UBERON:0000955!8.58e-08!50;UBERON:0006238!8.58e-08!50;UBERON:0003056!1.02e-07!49;UBERON:0007023!1.52e-07!51;UBERON:0000344!3.49e-07!15;UBERON:0003080!5.13e-07!40;UBERON:0002780!8.89e-07!39;UBERON:0001890!8.89e-07!39;UBERON:0006240!8.89e-07!39 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,6.85e-13,31;UBERON:0000007,1.32e-08,8;UBERON:0003296,1.32e-08,8;UBERON:0010133,1.32e-08,8;UBERON:0001894,7.28e-08,10;UBERON:0006222,7.28e-08,10;UBERON:0000344,2.12e-07,15;UBERON:0005409,2.17e-07,47;UBERON:0000073,4.79e-07,54;UBERON:0003080,5.37e-07,40 | |||
|phase1_expression=0.640595388419176,5.23463111459042,2.72999543633722,29.6414927080693,15.0268718983904,1.17515490338323,0.934450562382103,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,1.7008658030214,0.0992909512008853,0,1.59992422793407,1.83527424853736,3.44539178469012,2.15380998079537,1.72376986148711,2.66032787238923,2.52030129759931,0.886922042621219,0,0,0,1.44425809875637,0.664938581433969,1.42918549383658,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0.219686182734472,0.388859798148567,0,0,0,0,0,0,0,0,1.82084814773638,2.64495489636016,1.26766280701236,0,0,0,0,0,0.299600110518405,0,1.14058573539325,1.75507719831198,0.841299845405528,0,0,3.42974237801871,2.68367318851062,1.83843757322004,4.40463523997555,2.17068474744819,1.53606533256243,3.03338461779446,3.20206752608434,2.6045668527838,3.35019598801657,1.68828783009504,1.06958773443767,0.294628585473668,0.142371680799103,1.1183966749518,0,0.0755715601067855,2.02905142091174,2.58127163094416,0,2.15881276655127,1.29955283489534,1.79210754838934,1.26399978118577,0,0,0,1.54927761754349,0,0,0,0,0.506719730950197,0.505524445014783,2.8545969929765,0,0,0,0,0.230615497256059,0,0.23517741427141,0,3.95511948374998,3.32578520915797,0,0,0.220841518460394,0,3.72783522436244,0.585561594023094,1.67557365450764,3.0654846625031,0,0,0,1.19832511523858,0.457500602818626,2.1361239859187,0.521472960576829,1.02286182932132,1.66230435647648,0.648965052271031,0.305518091550949,0.248813941220186,0.505445516867349,6.73413938836717,0.260240885925407,0.229902104433473,0.360124259610698,0.30140963567143,0.476255494059295,0.768682321709099,0.749613796477831,3.62184719034622,0.646703978798527,0,0.351902248327898,0.219195732427575,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0.0810688095458557,0.146199987425332,0,0,0.630869845692382,0.514523061896422,12.2254949704005,12.4291766331866,0,0.696710015581316,0.644337306610467,0.403367049246685,0.22237804384487,1.14135375667535,7.59246498471219,3.45867804920423,3.01602250560323,4.17808591286417,3.50935356814416,1.79763881730844,6.91641759599022,2.19055400579804,0.379335801906163,0.342745537829186,0,0.610953983535943,0.193952487167626,0.701358198903186,0.442655759869801,1.47610147979602,1.8839847340965,3.20832626196681,0.889357881261447,0,0,0,0,0,0,0.287696137450811,0.162135226775035,0,0,0,0,0.757736633841335,0.538192240565737,2.41221760681684,3.14080423283228,0,0.162964976442026,0,0.234690248288502,0.335012514883631,0.476087281772027,0.780534591431195,0.157635144106191,0.221464689648775,0.318909537314974,0.655453258862952,0.690739927463582,1.88043776155965,0,0,0.491764273019036,0.551873492609465,0.963303539926752,1.17211686592203,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,1.56134093729095,0.35613120733451,0.488660878060728,4.94910368917606,1.32745138339963,0.242780636154981,0,0.377210159511796,1.18120757152309,0.922305443831782,1.29214146584111,0,1.06949213515416,0.316036757935816,0,0,1.36175842301515,1.98067203434441,4.78627129996192,4.28674070063185,6.20690817747958,4.28085162244969,4.60737257685939,13.3964577610424,1.17335854031855,4.87213762986786,0.661585194164886,0.49465875882444,0.322928853391811,0,0.119372344003136,0.328281799490123,4.08073171281791,0.18542530201051,0,0,0,0,0,0.228778173206523,0,0,0,0,0.632671987162271,0,0,0,0.436725127492355,0.404593039154462,0.165306911450672,1.30877970992015,1.8146096260851,3.72803587852155,0,0.299033092087958,0.496375471371293,0.583353565032143,0.904118764344118,0.506868376472335,0.117357238645754,0.2604087696879,0.838874755405687,0.724752362478018,0,0.632022241256357,0.202725215290164,0.102710957164827,0.129920822977795,0.716106782669926,0.198681354781265,0.120195449519969,0.147689527174577,0.403865799792591,0,0.302478555410522,0.292373642219257,0.577271049841977,0.233753804363138,0,1.77588762699252,0.0897138566094757,1.34307693091263,3.47741269257943,1.12609485270709,1.83151624267265,0,2.50786052017682,0,0,0,0,0,0,0.675022500231806,0.900642406448441,0.906284817968409,1.55328093525546,0.62272408550506,0.399024873401031,0.170733605754134,0,0.419226325255965,1.10306105070008,0.666740183404846,0.206035057238894,0.320919209591815,0.505394423527595,1.01391719956096,1.69763707247469,0.468207537349412,0.768301828858431,0.574354689556133,0,0.811190281613988,0.578727661391115,0.412085900803307,0.588795680537589,0,0.177475806159338,0,0.145346416632329,0.846984423737976,0.592302255241736,0.73171189149109,0.526139422875686,0.543216455383447,0.561142271657738,0.593175090620871,0.29551344712669,0,0.309873682371932,0.578719832943424,1.74867404556562,0.467863216890817,1.07435527024149,0.57386499620653,0.441182838239031,0.463735671240843 | |phase1_expression=0.640595388419176,5.23463111459042,2.72999543633722,29.6414927080693,15.0268718983904,1.17515490338323,0.934450562382103,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,1.7008658030214,0.0992909512008853,0,1.59992422793407,1.83527424853736,3.44539178469012,2.15380998079537,1.72376986148711,2.66032787238923,2.52030129759931,0.886922042621219,0,0,0,1.44425809875637,0.664938581433969,1.42918549383658,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0.219686182734472,0.388859798148567,0,0,0,0,0,0,0,0,1.82084814773638,2.64495489636016,1.26766280701236,0,0,0,0,0,0.299600110518405,0,1.14058573539325,1.75507719831198,0.841299845405528,0,0,3.42974237801871,2.68367318851062,1.83843757322004,4.40463523997555,2.17068474744819,1.53606533256243,3.03338461779446,3.20206752608434,2.6045668527838,3.35019598801657,1.68828783009504,1.06958773443767,0.294628585473668,0.142371680799103,1.1183966749518,0,0.0755715601067855,2.02905142091174,2.58127163094416,0,2.15881276655127,1.29955283489534,1.79210754838934,1.26399978118577,0,0,0,1.54927761754349,0,0,0,0,0.506719730950197,0.505524445014783,2.8545969929765,0,0,0,0,0.230615497256059,0,0.23517741427141,0,3.95511948374998,3.32578520915797,0,0,0.220841518460394,0,3.72783522436244,0.585561594023094,1.67557365450764,3.0654846625031,0,0,0,1.19832511523858,0.457500602818626,2.1361239859187,0.521472960576829,1.02286182932132,1.66230435647648,0.648965052271031,0.305518091550949,0.248813941220186,0.505445516867349,6.73413938836717,0.260240885925407,0.229902104433473,0.360124259610698,0.30140963567143,0.476255494059295,0.768682321709099,0.749613796477831,3.62184719034622,0.646703978798527,0,0.351902248327898,0.219195732427575,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0.0810688095458557,0.146199987425332,0,0,0.630869845692382,0.514523061896422,12.2254949704005,12.4291766331866,0,0.696710015581316,0.644337306610467,0.403367049246685,0.22237804384487,1.14135375667535,7.59246498471219,3.45867804920423,3.01602250560323,4.17808591286417,3.50935356814416,1.79763881730844,6.91641759599022,2.19055400579804,0.379335801906163,0.342745537829186,0,0.610953983535943,0.193952487167626,0.701358198903186,0.442655759869801,1.47610147979602,1.8839847340965,3.20832626196681,0.889357881261447,0,0,0,0,0,0,0.287696137450811,0.162135226775035,0,0,0,0,0.757736633841335,0.538192240565737,2.41221760681684,3.14080423283228,0,0.162964976442026,0,0.234690248288502,0.335012514883631,0.476087281772027,0.780534591431195,0.157635144106191,0.221464689648775,0.318909537314974,0.655453258862952,0.690739927463582,1.88043776155965,0,0,0.491764273019036,0.551873492609465,0.963303539926752,1.17211686592203,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,1.56134093729095,0.35613120733451,0.488660878060728,4.94910368917606,1.32745138339963,0.242780636154981,0,0.377210159511796,1.18120757152309,0.922305443831782,1.29214146584111,0,1.06949213515416,0.316036757935816,0,0,1.36175842301515,1.98067203434441,4.78627129996192,4.28674070063185,6.20690817747958,4.28085162244969,4.60737257685939,13.3964577610424,1.17335854031855,4.87213762986786,0.661585194164886,0.49465875882444,0.322928853391811,0,0.119372344003136,0.328281799490123,4.08073171281791,0.18542530201051,0,0,0,0,0,0.228778173206523,0,0,0,0,0.632671987162271,0,0,0,0.436725127492355,0.404593039154462,0.165306911450672,1.30877970992015,1.8146096260851,3.72803587852155,0,0.299033092087958,0.496375471371293,0.583353565032143,0.904118764344118,0.506868376472335,0.117357238645754,0.2604087696879,0.838874755405687,0.724752362478018,0,0.632022241256357,0.202725215290164,0.102710957164827,0.129920822977795,0.716106782669926,0.198681354781265,0.120195449519969,0.147689527174577,0.403865799792591,0,0.302478555410522,0.292373642219257,0.577271049841977,0.233753804363138,0,1.77588762699252,0.0897138566094757,1.34307693091263,3.47741269257943,1.12609485270709,1.83151624267265,0,2.50786052017682,0,0,0,0,0,0,0.675022500231806,0.900642406448441,0.906284817968409,1.55328093525546,0.62272408550506,0.399024873401031,0.170733605754134,0,0.419226325255965,1.10306105070008,0.666740183404846,0.206035057238894,0.320919209591815,0.505394423527595,1.01391719956096,1.69763707247469,0.468207537349412,0.768301828858431,0.574354689556133,0,0.811190281613988,0.578727661391115,0.412085900803307,0.588795680537589,0,0.177475806159338,0,0.145346416632329,0.846984423737976,0.592302255241736,0.73171189149109,0.526139422875686,0.543216455383447,0.561142271657738,0.593175090620871,0.29551344712669,0,0.309873682371932,0.578719832943424,1.74867404556562,0.467863216890817,1.07435527024149,0.57386499620653,0.441182838239031,0.463735671240843 | ||
|short_description=p3@Ptms | |short_description=p3@Ptms | ||
}} | }} |
Latest revision as of 16:32, 26 September 2015
Short description: | p3@Ptms |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Ptms_5end |
Coexpression cluster: | MCL_coexpression_mm9:88 |
Association with transcript: | -43bp_to_ENSMUST00000134916_5end |
EntrezGene: | Ptms |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.41e-08 | 23 |
neuroblast (sensu Vertebrata) | 1.41e-08 | 23 |
Ontology term | p-value | n |
---|---|---|
intestine | 6.85e-13 | 31 |
pituitary gland | 1.32e-08 | 8 |
gland of diencephalon | 1.32e-08 | 8 |
neuroendocrine gland | 1.32e-08 | 8 |
diencephalon | 7.28e-08 | 10 |
future diencephalon | 7.28e-08 | 10 |
mucosa | 2.12e-07 | 15 |
gastrointestinal system | 2.17e-07 | 47 |
regional part of nervous system | 4.79e-07 | 54 |
anterior neural tube | 5.37e-07 | 40 |