FFCP PHASE1:Mm9::chr1:168060542..168060555,+: Difference between revisions
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{{FFCP|EntrezGene=59290|HGNC=|MCL_coexpression_id=12|UniProt=|association_with_transcript=0bp_to_ENSMUST00000027847_5end|description=CAGE_peak_2_at_Gpa33_5end|id=chr1:168060542..168060555,+|ontology_enrichment_celltype=CL:0002563!1.14e-08!9;CL:0002251!1.14e-08!9;CL:0002076!6.19e-07!15|ontology_enrichment_celltype_v019_2=CL:0002563,1.22e-12,9;CL:0002251,1.22e-12,9;CL:0000239,2.56e-09,6;CL:0000677,2.56e-09,6;CL:0000584,2.56e-09,6;CL:0002076,4.70e-08,15;CL:0000075,8.04e-08,7;CL:0000066,1.88e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!1.78e-20!59;UBERON:0000160!1.51e-19!43;UBERON:0000344!2.82e-14!15;UBERON:0001242!2.12e-12!13;UBERON:0000060!2.12e-12!13;UBERON:0001262!2.12e-12!13;UBERON:0004786!2.12e-12!13;UBERON:0003350!1.14e-08!9;UBERON:0004808!1.14e-08!9;UBERON:0001277!1.14e-08!9;UBERON:0001007!1.39e-08!128;UBERON:0001555!1.39e-08!128;UBERON:0007026!1.39e-08!128;UBERON:0004119!3.62e-08!130;UBERON:0000925!3.62e-08!130;UBERON:0006595!3.62e-08!130;UBERON:0004923!1.25e-07!24;UBERON:0004921!1.33e-07!126;UBERON:0004185!1.33e-07!126|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.56e-38,31;UBERON:0005409,4.64e-37,47;UBERON:0000344,2.21e-21,15;UBERON:0001242,1.88e-18,13;UBERON:0001262,1.88e-18,13;UBERON:0004786,1.88e-18,13;UBERON:0004923,4.76e-13,24;UBERON:0003350,1.22e-12,9;UBERON:0004808,1.22e-12,9;UBERON:0001277,1.22e-12,9;UBERON:0001007,1.39e-11,116;UBERON:0001555,1.39e-11,116;UBERON:0007026,1.39e-11,116;UBERON:0004119,3.45e-11,118;UBERON:0000925,3.45e-11,118;UBERON:0006595,3.45e-11,118;UBERON:0004921,4.25e-10,114;UBERON:0000485,6.38e-10,11;UBERON:0002108,3.37e-07,4|phase1_expression=0,139.590163055744,135.589773338082,50.8139874995474,52.5940516443665,77.3923443513812,77.7930093183101,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,117.594430753154,137.874977921369,109.678305145969,144.30526871329,138.763473849713,124.085292905012,106.104684628931,166.963074523444,0,0,0,36.6841557084119,44.7171196014344,36.3421454147017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.65155492342555,0,0,0,0,0,0,0,0.865964164044856,1.77351905832569,0.505524445014783,13.9304333257253,0,0,0,0,0,0,0,0,1.73036477414062,0,0,0.161766849947409,0,0,46.5979403045305,0,0,89.6654263782156,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,1.0108910337347,0,0,0.459804208866946,0,0,0,0.12811372028485,0,0,0,0,0,0.43839146485515,0.278047249225598,0,0.205782136407943,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,0,0,137.45421372126,68.2282461991944,0.426576501070468,1.39342003116263,9.27845721519072,16.7397325437374,22.6825604721768,27.7729414124336,78.2972951548444,55.1741498325436,55.2937459360593,60.681723972551,57.3194416130213,65.6138168317582,93.3716375458679,79.8556505750012,0.189667900953082,0.228497025219458,0,0.203651327845314,0.193952487167626,0.280543279561274,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0.325929952884052,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0.162886959353576,0.494910368917606,0,0,0.906970670894253,0.188605079755898,0.295301892880773,0,13.9551278310839,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0,0,0,0.16488625294148,0.161464426695906,0,0,0.656563598980245,81.3231534197284,0,0,0,0,0,0,0,0,0,0,7.63736494412091,0,0.609958401380546,3.13215488383224,2.50905955217362,6.11415178489297,7.01294601201068,7.60411792673091,7.32916637555283,102.525443873808,0,0,0,0,0.388902376688095,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0.120195449519969,0.295379054349154,0.201932899896295,0,0.302478555410522,0.292373642219257,0.288635524920988,0.350630706544707,0,0.221985953374065,0,0.167884616364078,7.53439416725543,0,0.36630324853453,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0.209613162627982,0.551530525350042,1.77797382241292,1.64828045791115,0.64183841918363,3.28506375292937,1.77435509923168,1.50901073108861,2.24739617927718,1.6646539625266,1.55075766180156,0.952587382566147,2.0859178670074,2.12200142510076,0,0.735994600671987,1.02860775715625,0.532427418478012,0.238436189947321,1.88950341622027,1.2234219453993,1.18460451048347,0.914639864363863,0.789209134313529,1.22223702461276,0,1.77952527186261,1.97008964751127,0.818462086339379,1.23949472948773,0.385813221962283,0,1.87145286756327,3.86767897286937,0,0.220591419119515,0.231867835620421|short_description=p2@Gpa33}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=59290 | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000027847_5end | |||
|cluster_id=chr1:168060542..168060555,+ | |||
|description=CAGE_peak_2_at_Gpa33_5end | |||
|id=chr1:168060542..168060555,+ | |||
|ontology_enrichment_celltype=CL:0002563!1.14e-08!9;CL:0002251!1.14e-08!9;CL:0002076!6.19e-07!15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.22e-12,9;CL:0002251,1.22e-12,9;CL:0000239,2.56e-09,6;CL:0000677,2.56e-09,6;CL:0000584,2.56e-09,6;CL:0002076,4.70e-08,15;CL:0000075,8.04e-08,7;CL:0000066,1.88e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.78e-20!59;UBERON:0000160!1.51e-19!43;UBERON:0000344!2.82e-14!15;UBERON:0001242!2.12e-12!13;UBERON:0000060!2.12e-12!13;UBERON:0001262!2.12e-12!13;UBERON:0004786!2.12e-12!13;UBERON:0003350!1.14e-08!9;UBERON:0004808!1.14e-08!9;UBERON:0001277!1.14e-08!9;UBERON:0001007!1.39e-08!128;UBERON:0001555!1.39e-08!128;UBERON:0007026!1.39e-08!128;UBERON:0004119!3.62e-08!130;UBERON:0000925!3.62e-08!130;UBERON:0006595!3.62e-08!130;UBERON:0004923!1.25e-07!24;UBERON:0004921!1.33e-07!126;UBERON:0004185!1.33e-07!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.56e-38,31;UBERON:0005409,4.64e-37,47;UBERON:0000344,2.21e-21,15;UBERON:0001242,1.88e-18,13;UBERON:0001262,1.88e-18,13;UBERON:0004786,1.88e-18,13;UBERON:0004923,4.76e-13,24;UBERON:0003350,1.22e-12,9;UBERON:0004808,1.22e-12,9;UBERON:0001277,1.22e-12,9;UBERON:0001007,1.39e-11,116;UBERON:0001555,1.39e-11,116;UBERON:0007026,1.39e-11,116;UBERON:0004119,3.45e-11,118;UBERON:0000925,3.45e-11,118;UBERON:0006595,3.45e-11,118;UBERON:0004921,4.25e-10,114;UBERON:0000485,6.38e-10,11;UBERON:0002108,3.37e-07,4 | |||
|phase1_expression=0,139.590163055744,135.589773338082,50.8139874995474,52.5940516443665,77.3923443513812,77.7930093183101,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,117.594430753154,137.874977921369,109.678305145969,144.30526871329,138.763473849713,124.085292905012,106.104684628931,166.963074523444,0,0,0,36.6841557084119,44.7171196014344,36.3421454147017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.65155492342555,0,0,0,0,0,0,0,0.865964164044856,1.77351905832569,0.505524445014783,13.9304333257253,0,0,0,0,0,0,0,0,1.73036477414062,0,0,0.161766849947409,0,0,46.5979403045305,0,0,89.6654263782156,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,1.0108910337347,0,0,0.459804208866946,0,0,0,0.12811372028485,0,0,0,0,0,0.43839146485515,0.278047249225598,0,0.205782136407943,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,0,0,137.45421372126,68.2282461991944,0.426576501070468,1.39342003116263,9.27845721519072,16.7397325437374,22.6825604721768,27.7729414124336,78.2972951548444,55.1741498325436,55.2937459360593,60.681723972551,57.3194416130213,65.6138168317582,93.3716375458679,79.8556505750012,0.189667900953082,0.228497025219458,0,0.203651327845314,0.193952487167626,0.280543279561274,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0.325929952884052,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0.162886959353576,0.494910368917606,0,0,0.906970670894253,0.188605079755898,0.295301892880773,0,13.9551278310839,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0,0,0,0.16488625294148,0.161464426695906,0,0,0.656563598980245,81.3231534197284,0,0,0,0,0,0,0,0,0,0,7.63736494412091,0,0.609958401380546,3.13215488383224,2.50905955217362,6.11415178489297,7.01294601201068,7.60411792673091,7.32916637555283,102.525443873808,0,0,0,0,0.388902376688095,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0.120195449519969,0.295379054349154,0.201932899896295,0,0.302478555410522,0.292373642219257,0.288635524920988,0.350630706544707,0,0.221985953374065,0,0.167884616364078,7.53439416725543,0,0.36630324853453,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0.209613162627982,0.551530525350042,1.77797382241292,1.64828045791115,0.64183841918363,3.28506375292937,1.77435509923168,1.50901073108861,2.24739617927718,1.6646539625266,1.55075766180156,0.952587382566147,2.0859178670074,2.12200142510076,0,0.735994600671987,1.02860775715625,0.532427418478012,0.238436189947321,1.88950341622027,1.2234219453993,1.18460451048347,0.914639864363863,0.789209134313529,1.22223702461276,0,1.77952527186261,1.97008964751127,0.818462086339379,1.23949472948773,0.385813221962283,0,1.87145286756327,3.86767897286937,0,0.220591419119515,0.231867835620421 | |||
|short_description=p2@Gpa33 | |||
}} |
Latest revision as of 17:35, 26 September 2015
Short description: | p2@Gpa33 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Gpa33_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 0bp_to_ENSMUST00000027847_5end |
EntrezGene: | Gpa33 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.22e-12 | 9 |
epithelial cell of alimentary canal | 1.22e-12 | 9 |
brush border epithelial cell | 2.56e-09 | 6 |
gut absorptive cell | 2.56e-09 | 6 |
enterocyte | 2.56e-09 | 6 |
endo-epithelial cell | 4.70e-08 | 15 |
columnar/cuboidal epithelial cell | 8.04e-08 | 7 |
epithelial cell | 1.88e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
intestine | 5.56e-38 | 31 |
gastrointestinal system | 4.64e-37 | 47 |
mucosa | 2.21e-21 | 15 |
intestinal mucosa | 1.88e-18 | 13 |
wall of intestine | 1.88e-18 | 13 |
gastrointestinal system mucosa | 1.88e-18 | 13 |
organ component layer | 4.76e-13 | 24 |
epithelium of mucosa | 1.22e-12 | 9 |
gastrointestinal system epithelium | 1.22e-12 | 9 |
intestinal epithelium | 1.22e-12 | 9 |
digestive system | 1.39e-11 | 116 |
digestive tract | 1.39e-11 | 116 |
primitive gut | 1.39e-11 | 116 |
endoderm-derived structure | 3.45e-11 | 118 |
endoderm | 3.45e-11 | 118 |
presumptive endoderm | 3.45e-11 | 118 |
subdivision of digestive tract | 4.25e-10 | 114 |
simple columnar epithelium | 6.38e-10 | 11 |
small intestine | 3.37e-07 | 4 |