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FFCP PHASE1:Mm9::chr9:46036784..46036797,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr9:46036784..46036797,+
|DHSsupport=NA
|short_description=p1@Apoa1
|DPIdataset=NA
|description=CAGE_peak_1_at_Apoa1_5end
|association_with_transcript=-6bp_to_ENSMUST00000132155_5end
|EntrezGene=11806
|EntrezGene=11806
|HGNC=
|HGNC=
|MCL_coexpression_id=207
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=-6bp_to_ENSMUST00000132155_5end
|cluster_id=chr9:46036784..46036797,+
|description=CAGE_peak_1_at_Apoa1_5end
|id=chr9:46036784..46036797,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004119!1.97e-17!130;UBERON:0000925!1.97e-17!130;UBERON:0006595!1.97e-17!130;UBERON:0001007!8.43e-17!128;UBERON:0001555!8.43e-17!128;UBERON:0007026!8.43e-17!128;UBERON:0005409!4.91e-16!59;UBERON:0004921!1.19e-15!126;UBERON:0004185!1.19e-15!126;UBERON:0000160!1.95e-14!43;UBERON:0009854!5.53e-13!23;UBERON:0009856!5.53e-13!23;UBERON:0002107!7.48e-13!22;UBERON:0007499!7.48e-13!22;UBERON:0006925!7.48e-13!22;UBERON:0009497!7.48e-13!22;UBERON:0000015!7.48e-13!22;UBERON:0002423!7.48e-13!22;UBERON:0006235!7.48e-13!22;UBERON:0008835!7.48e-13!22;UBERON:0003894!7.48e-13!22;UBERON:0004161!7.48e-13!22;UBERON:0008836!7.48e-13!22;UBERON:0005172!1.01e-10!49;UBERON:0005173!1.01e-10!49;UBERON:0002417!1.01e-10!49;UBERON:0000916!1.01e-10!49;UBERON:0002365!1.27e-09!25;UBERON:0002330!1.27e-09!25;UBERON:0000344!3.81e-08!15;UBERON:0009569!3.89e-08!66;UBERON:0004923!4.75e-08!24;UBERON:0005177!5.29e-08!85;UBERON:0001242!6.75e-07!13;UBERON:0000060!6.75e-07!13;UBERON:0001262!6.75e-07!13;UBERON:0004786!6.75e-07!13
|ontology_enrichment_uberon_v019_2=UBERON:0005409,7.65e-16,47;UBERON:0000160,3.25e-15,31;UBERON:0004119,6.00e-15,118;UBERON:0000925,6.00e-15,118;UBERON:0006595,6.00e-15,118;UBERON:0001007,2.42e-14,116;UBERON:0001555,2.42e-14,116;UBERON:0007026,2.42e-14,116;UBERON:0009854,1.03e-13,23;UBERON:0009856,1.03e-13,23;UBERON:0002107,1.42e-13,22;UBERON:0007499,1.42e-13,22;UBERON:0006925,1.42e-13,22;UBERON:0009497,1.42e-13,22;UBERON:0000015,1.42e-13,22;UBERON:0002423,1.42e-13,22;UBERON:0006235,1.42e-13,22;UBERON:0008835,1.42e-13,22;UBERON:0003894,1.42e-13,22;UBERON:0004161,1.42e-13,22;UBERON:0008836,1.42e-13,22;UBERON:0004921,3.09e-13,114;UBERON:0002365,1.72e-10,25;UBERON:0002330,1.72e-10,25;UBERON:0005172,1.92e-10,49;UBERON:0005173,1.92e-10,49;UBERON:0002417,1.92e-10,49;UBERON:0000916,1.92e-10,49;UBERON:0000344,1.44e-08,15;UBERON:0004923,4.23e-08,24;UBERON:0005177,4.89e-08,79;UBERON:0001242,3.06e-07,13;UBERON:0001262,3.06e-07,13;UBERON:0004786,3.06e-07,13;UBERON:0009569,8.51e-07,66;UBERON:0003929,9.09e-07,55
|phase1_expression=0,24781.4416472863,23569.4155996174,9076.64851710666,8380.98735346228,2806.43778855106,3486.20143560703,0,0,0,0,0,0,0,1.33243904726265,0,0,0,0,0,14.2022294552287,0,0,13210.4143576288,16997.3924528288,25221.990559824,16918.1773991477,16359.0069279781,8075.23523321807,9176.66905468884,11269.8966650772,0,0,15.8481681015439,9.82095507154334,102.234306895473,8.77928231928187,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0,1.43752564364972,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4209602298922,0,0,0,0,0,3.42781181284564,0,0,0,0,1.10115880999389,0,0,0,0,0,0,3.37657566019008,0.61119299110724,0.589257170947335,0,4.65998614563251,2.34751199332871,0,37.6823835312181,11509.029778503,19144.5929005417,13676.0788761023,19025.4535028678,15508.4506968743,3331.20120110502,0,0,0,0.14084341977668,0,0,0,0,0,0,6236.72351025506,0,35.1807869583635,82.5790155406807,130.920155674221,443.242985726144,349.073635519874,363.231516342192,125.163924964357,28674.8634521551,4.916378135277,0,3.558870698843,0.220841518460394,0,236.717536747015,0,0,6571.1218311306,0,0,0,0,0,0.125654352112864,0,0,0,0,22.2009813193689,0.622034853050465,0.505445516867349,0,0,0,0,149.649884110865,0,0,0,0,0,24.3946843416487,0.175951124163949,0,0.278047249225598,2.089512999133,0.205782136407943,0.398068533636986,0,0,0,7.24940203874257,14.7751417788091,0.540186184383045,0.23674473558521,5.50939848892731,2.31400669331067,3.0229412817553,0.536546802799238,0.934122738937356,7.89887279584706,0.32833492815819,0.243206428637567,0,1.75640092232841,4.83143107537338,0,0,16091.394731311,9846.28794858374,13.0105832826493,29.0295839825548,191.883649908597,1303.68230316529,2989.87279949428,4905.15799493845,7097.05664445972,16574.973405515,7261.82818786619,8617.40167351836,8250.29527461981,7278.63957128189,6913.1755252421,7930.00464226216,8.15571974098251,32.1038320433338,7.88954149711563,5.29493452397817,9.69762435838129,28.8959577948112,6.76630947229553,2.80459281161244,1.56998727841375,1.35736880313981,7521.00314920097,537.908620828687,773.459645770454,1194.69240310073,2119.88826850986,3687.3575954547,6396.20139674927,11221.5878412689,13816.839755315,14094.335584597,8669.22285359948,19437.6659786213,23500.80531295,14725.6011631946,9065.48949750279,14508.0415744392,0.554259570499814,19.138632588819,7.98528384565927,2.20668611507745,2.11221223459652,0.670025029767263,119.021820443007,24.0014386865093,0.788175720530955,0.221464689648775,7.97273843287435,1.80249646187312,0.345369963731791,0.433947175744535,0,0,0,0,0,0,0,1.00988370881749,20.1925260426404,0.780877488593277,1.29254038639679,0,5.56996685205985,32.8368775715046,11.334699646897,8.76767573733936,1.58115111178609,0,13.200427924369,323.189070656068,9.77321756121457,0.164970122972535,1.32745138339963,26.463089340893,32.9532677091579,10.9390946258421,12.993283286754,49.4970588189723,1864.81856350188,51.9853233152833,79.1424180014081,12.9575070753685,1.05418608574999,7.21948802737308,0,0.18006109403131,0.129358683782755,0.214337035031592,0.177340233642274,0,0.164549020602121,2.43571959291679,223.87680949278,896.896988037415,0,0,0.484393280087717,0,0.238744688006273,0.328281799490123,8555.25403592275,0,0.512612642393558,13.4151464176095,17.0378965180135,3.20226376907975,1.0935538217682,3.43167259809784,0,0,0,1146.55941223615,16.7658076598002,56.3194923941371,148.615348970799,97.4351459427424,423.186648540092,528.128780442958,1792.91876159399,1196.74816675098,4.01806417204558,0,0,0.149516546043979,0,0,5.8121920564979,1.35164900392623,0.352071715937262,367.566978414471,0.104859344425711,0,0,0.948033361884535,2.02725215290164,1.33524244314275,0.909445760844565,2.68540043501222,1.58945083825012,1.68273629327956,1.32920574457119,1.9183625490148,0.990688486514998,2.01652370273681,2.33898913775406,2.5977197242889,1.75315353272353,0,0,0,0,2.89784391048286,0.187682475451182,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,2.49089634202024,47.4839599347227,123.269663354485,414.010739167305,206.888191513819,459.057240599685,970.329213581852,1033.88391722477,813.20927710566,942.813297090728,964.742215382252,997.456093249571,878.919189112316,824.900063584336,988.923904477749,1102.61989532032,1047.82607519338,1092.83073392689,1280.35089379587,1422.08876741841,942.204705555122,994.041990298449,1019.79158440469,979.053462435365,1040.75563801314,842.507650777423,1044.88458104928,1263.26075432452,943.023766545664,1287.26037118285,1181.84205055302,1055.08151072466,1167.53616616312,856.800731758392,853.225940369588,0.749431733813838,1313.75991302941,1651.71379246927,33.4754581120476,155.075767641019,44.2867566035005
|phase1_expression=0,24781.4416472863,23569.4155996174,9076.64851710666,8380.98735346228,2806.43778855106,3486.20143560703,0,0,0,0,0,0,0,1.33243904726265,0,0,0,0,0,14.2022294552287,0,0,13210.4143576288,16997.3924528288,25221.990559824,16918.1773991477,16359.0069279781,8075.23523321807,9176.66905468884,11269.8966650772,0,0,15.8481681015439,9.82095507154334,102.234306895473,8.77928231928187,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0,1.43752564364972,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4209602298922,0,0,0,0,0,3.42781181284564,0,0,0,0,1.10115880999389,0,0,0,0,0,0,3.37657566019008,0.61119299110724,0.589257170947335,0,4.65998614563251,2.34751199332871,0,37.6823835312181,11509.029778503,19144.5929005417,13676.0788761023,19025.4535028678,15508.4506968743,3331.20120110502,0,0,0,0.14084341977668,0,0,0,0,0,0,6236.72351025506,0,35.1807869583635,82.5790155406807,130.920155674221,443.242985726144,349.073635519874,363.231516342192,125.163924964357,28674.8634521551,4.916378135277,0,3.558870698843,0.220841518460394,0,236.717536747015,0,0,6571.1218311306,0,0,0,0,0,0.125654352112864,0,0,0,0,22.2009813193689,0.622034853050465,0.505445516867349,0,0,0,0,149.649884110865,0,0,0,0,0,24.3946843416487,0.175951124163949,0,0.278047249225598,2.089512999133,0.205782136407943,0.398068533636986,0,0,0,7.24940203874257,14.7751417788091,0.540186184383045,0.23674473558521,5.50939848892731,2.31400669331067,3.0229412817553,0.536546802799238,0.934122738937356,7.89887279584706,0.32833492815819,0.243206428637567,0,1.75640092232841,4.83143107537338,0,0,16091.394731311,9846.28794858374,13.0105832826493,29.0295839825548,191.883649908597,1303.68230316529,2989.87279949428,4905.15799493845,7097.05664445972,16574.973405515,7261.82818786619,8617.40167351836,8250.29527461981,7278.63957128189,6913.1755252421,7930.00464226216,8.15571974098251,32.1038320433338,7.88954149711563,5.29493452397817,9.69762435838129,28.8959577948112,6.76630947229553,2.80459281161244,1.56998727841375,1.35736880313981,7521.00314920097,537.908620828687,773.459645770454,1194.69240310073,2119.88826850986,3687.3575954547,6396.20139674927,11221.5878412689,13816.839755315,14094.335584597,8669.22285359948,19437.6659786213,23500.80531295,14725.6011631946,9065.48949750279,14508.0415744392,0.554259570499814,19.138632588819,7.98528384565927,2.20668611507745,2.11221223459652,0.670025029767263,119.021820443007,24.0014386865093,0.788175720530955,0.221464689648775,7.97273843287435,1.80249646187312,0.345369963731791,0.433947175744535,0,0,0,0,0,0,0,1.00988370881749,20.1925260426404,0.780877488593277,1.29254038639679,0,5.56996685205985,32.8368775715046,11.334699646897,8.76767573733936,1.58115111178609,0,13.200427924369,323.189070656068,9.77321756121457,0.164970122972535,1.32745138339963,26.463089340893,32.9532677091579,10.9390946258421,12.993283286754,49.4970588189723,1864.81856350188,51.9853233152833,79.1424180014081,12.9575070753685,1.05418608574999,7.21948802737308,0,0.18006109403131,0.129358683782755,0.214337035031592,0.177340233642274,0,0.164549020602121,2.43571959291679,223.87680949278,896.896988037415,0,0,0.484393280087717,0,0.238744688006273,0.328281799490123,8555.25403592275,0,0.512612642393558,13.4151464176095,17.0378965180135,3.20226376907975,1.0935538217682,3.43167259809784,0,0,0,1146.55941223615,16.7658076598002,56.3194923941371,148.615348970799,97.4351459427424,423.186648540092,528.128780442958,1792.91876159399,1196.74816675098,4.01806417204558,0,0,0.149516546043979,0,0,5.8121920564979,1.35164900392623,0.352071715937262,367.566978414471,0.104859344425711,0,0,0.948033361884535,2.02725215290164,1.33524244314275,0.909445760844565,2.68540043501222,1.58945083825012,1.68273629327956,1.32920574457119,1.9183625490148,0.990688486514998,2.01652370273681,2.33898913775406,2.5977197242889,1.75315353272353,0,0,0,0,2.89784391048286,0.187682475451182,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,2.49089634202024,47.4839599347227,123.269663354485,414.010739167305,206.888191513819,459.057240599685,970.329213581852,1033.88391722477,813.20927710566,942.813297090728,964.742215382252,997.456093249571,878.919189112316,824.900063584336,988.923904477749,1102.61989532032,1047.82607519338,1092.83073392689,1280.35089379587,1422.08876741841,942.204705555122,994.041990298449,1019.79158440469,979.053462435365,1040.75563801314,842.507650777423,1044.88458104928,1263.26075432452,943.023766545664,1287.26037118285,1181.84205055302,1055.08151072466,1167.53616616312,856.800731758392,853.225940369588,0.749431733813838,1313.75991302941,1651.71379246927,33.4754581120476,155.075767641019,44.2867566035005
|short_description=p1@Apoa1
}}
}}

Latest revision as of 18:04, 26 September 2015

Short description:p1@Apoa1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Apoa1_5end
Coexpression cluster:MCL_coexpression_mm9:207
Association with transcript: -6bp_to_ENSMUST00000132155_5end
EntrezGene:Apoa1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Apoa1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I524781.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I623569.42
CD326+ enterocyte, pool1.CNhs13542.11848-124I39076.65
CD326+ enterocyte, pool2.CNhs13197.11849-124I48380.99
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72806.44
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I83486.20
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A314.20
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D113210.41
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D216997.39
GP2+ M cell, pool1.CNhs13228.11845-124H925221.99
GP2+ M cell, pool2.CNhs13231.11846-124I116918.18
GP2+ M cell, pool3.CNhs13240.11847-124I216359.01
Ileum epithelium, pool1.CNhs13199.10252-104B98075.24
Ileum epithelium, pool2.CNhs13232.10253-104C19176.67
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C811269.90
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F59.82
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F6102.23
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F78.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.61
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E14.66
Mouse Schwann, donor1.CNhs12507.11728-123D92.35
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G337.68
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F711509.03
Mouse hepatocyte, donor1.CNhs13078.11714-123C419144.59
Mouse hepatocyte, donor3.CNhs12615.11637-122C813676.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F419025.45
Mouse hepatocyte, donor8.CNhs13091.11824-124F615508.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73331.20
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B66236.72
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D735.18
adrenal gland, embryo E14.CNhs11038.406-44C582.58
adrenal gland, embryo E16.CNhs11004.1254-43D6130.92
adrenal gland, embryo E17.CNhs11043.1263-45I1443.24
adrenal gland, embryo E18.CNhs11026.1262-18F5349.07
adrenal gland, neonate N00.CNhs11191.1311-23C1363.23
adrenal gland, neonate N25.CNhs11223.1377-27I3125.16
amnion, adult pregnant day17.5.CNhs10488.583-22A828674.86
aorta, adult.CNhs10498.46-23H14.92
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F53.56
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H4236.72
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H76571.12
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B122.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.62
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D4149.65
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H224.39
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C42.09
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E97.25
heart, embryo E12.CNhs11015.353-12F514.78
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C85.51
heart, embryo E16.CNhs11021.457-17C62.31
heart, embryo E17.CNhs11025.479-18E53.02
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.93
heart, neonate N03.CNhs11221.1349-25I27.90
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.24
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D31.76
heart, neonate N30.CNhs11202.1390-42D24.83
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I316091.39
intestine, adult.CNhs10496.178-9A39846.29
intestine, embryo E12.CNhs11019.1251-16I513.01
intestine, embryo E13.CNhs11010.381-16D529.03
intestine, embryo E15.CNhs10602.976-16D8191.88
intestine, embryo E16.CNhs10585.463-22H41303.68
intestine, embryo E17.CNhs10582.482-18D32989.87
intestine, embryo E18.CNhs10526.1289-20F74905.16
intestine, neonate N00.CNhs11126.644-26D17097.06
intestine, neonate N01.CNhs11192.1322-23E916574.97
intestine, neonate N06.CNhs11102.688-20B87261.83
intestine, neonate N07.CNhs11095.720-20F28617.40
intestine, neonate N10.CNhs11098.755-23A58250.30
intestine, neonate N20.CNhs11187.827-18D17278.64
intestine, neonate N25.CNhs11121.1352-25E36913.18
intestine, neonate N30.CNhs11131.1384-42G17930.00
kidney, embryo E14.CNhs10606.411-4I98.16
kidney, embryo E15.CNhs10997.434-16F832.10
kidney, embryo E16.CNhs10584.464-22A57.89
kidney, embryo E17.CNhs11028.483-18I25.29
kidney, embryo E18.CNhs11001.1288-20C79.70
kidney, neonate N00.CNhs11214.646-21G728.90
kidney, neonate N10.CNhs11206.758-6D56.77
kidney, neonate N20.CNhs11113.832-19I12.80
kidney, neonate N25.CNhs11122.1353-25F31.57
kidney, neonate N30.CNhs11203.1385-42H11.36
liver, adult pregnant day01.CNhs10466.508-5B27521.00
liver, embryo E12.CNhs10601.355-15F8537.91
liver, embryo E13.CNhs10524.378-3H6773.46
liver, embryo E14.CNhs10594.409-16E11194.69
liver, embryo E15.CNhs10520.433-16D72119.89
liver, embryo E16.CNhs10523.462-17F53687.36
liver, embryo E17.CNhs10510.481-18A36396.20
liver, embryo E18.CNhs10579.499-43G411221.59
liver, neonate N00.CNhs11117.641-24F413816.84
liver, neonate N03.CNhs11123.1345-25G214094.34
liver, neonate N06.CNhs11101.684-20A88669.22
liver, neonate N07.CNhs11103.716-20H219437.67
liver, neonate N10.CNhs11115.751-24B923500.81
liver, neonate N20.CNhs11220.823-25A314725.60
liver, neonate N25.CNhs11198.1368-26H19065.49
liver, neonate N30.CNhs11106.1382-42D114508.04
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G219.14
lung, embryo E14.CNhs10604.404-26F87.99
lung, embryo E15.CNhs11020.432-17C52.21
lung, embryo E16.CNhs10998.458-17B62.11
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I6119.02
lung, neonate N00.CNhs11224.640-42C624.00
lung, neonate N06.CNhs11212.683-20E50.79
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E67.97
lung, neonate N20.CNhs11109.822-18A41.80
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.01
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E120.19
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.29
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D85.57
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D932.84
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D411.33
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D58.77
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I713.20
ovary, embryo E18.CNhs11040.505-44H7323.19
ovary, neonate N00.CNhs11217.1299-22I49.77
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F426.46
pancreas, embryo E15.CNhs11042.1556-45F232.95
pancreas, embryo E16.CNhs11003.460-26E510.94
pancreas, embryo E17.CNhs10599.1558-45G312.99
pancreas, embryo E18.CNhs10580.1535-43I749.50
pancreas, neonate N00.CNhs11105.645-26G91864.82
pancreas, neonate N01.CNhs11138.1531-43D751.99
pancreas, neonate N02.CNhs11139.1539-43D879.14
pancreas, neonate N16.CNhs11136.787-43B612.96
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H57.22
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E92.44
placenta, adult pregnant day10.CNhs10472.539-13I7223.88
placenta, adult pregnant day17.CNhs10464.577-18G3896.90
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I18555.25
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.51
spleen, embryo E16.CNhs11035.461-43C113.42
spleen, embryo E18.CNhs11011.1271-21F217.04
spleen, neonate N10.CNhs11116.752-24D13.20
spleen, neonate N20.CNhs11112.824-19H11.09
spleen, neonate N25.CNhs11099.1354-25G33.43
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H61146.56
stomach, embryo E12.CNhs10588.356-43E316.77
stomach, embryo E15.CNhs10603.1252-16G856.32
stomach, embryo E16.CNhs11022.459-17D4148.62
stomach, embryo E17.CNhs11006.1035-18D597.44
stomach, embryo E18.CNhs10999.1286-20C6423.19
stomach, neonate N03.CNhs11193.1340-24B8528.13
stomach, neonate N07.CNhs11210.718-18A91792.92
stomach, neonate N25.CNhs11104.1355-25E41196.75
stomach, neonate N30.CNhs11134.1386-42I14.02
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I55.81
testis, embryo E18.CNhs11027.503-18G51.35
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I4367.57
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.95
thymus, embryo E14.CNhs11041.402-44I42.03
thymus, embryo E15.CNhs11005.430-45I21.34
thymus, embryo E16.CNhs11002.456-26C50.91
thymus, embryo E17.CNhs10581.478-18C12.69
thymus, embryo E18.CNhs10595.1273-19G41.59
thymus, neonate N02.CNhs11181.1541-43F81.68
thymus, neonate N03.CNhs11137.2104-43C71.33
thymus, neonate N06.CNhs11197.681-26C41.92
thymus, neonate N07.CNhs11211.713-19D30.99
thymus, neonate N10.CNhs11194.748-24E42.02
thymus, neonate N20.CNhs11186.820-7A22.34
thymus, neonate N25.CNhs11125.1362-25G72.60
thymus, neonate N30.CNhs11132.1393-42G21.75
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E42.90
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I82.49
whole body, embryo E12.CNhs10587.857-27C947.48
whole body, embryo E13.CNhs10512.372-23H2123.27
whole body, embryo E14.5.CNhs10578.420-27D2414.01
whole body, embryo E14.CNhs10519.395-14B1206.89
whole body, embryo E16.CNhs10514.453-14F2459.06
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G5970.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51033.88
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G5813.21
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G5942.81
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G5964.74
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G5997.46
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G5878.92
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G5824.90
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G5988.92
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51102.62
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51047.83
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51092.83
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51280.35
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51422.09
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G5942.20
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G5994.04
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51019.79
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G5979.05
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51040.76
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G5842.51
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51044.88
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51263.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G5943.02
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51287.26
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51181.84
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51055.08
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51167.54
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G5856.80
whole body, embryo E17.5.CNhs10513.490-9F9853.23
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B31313.76
whole body, neonate N00.CNhs10525.657-19C21651.71
whole body, neonate N01.CNhs10576.659-23C633.48
whole body, neonate N06.CNhs10515.692-21D1155.08
whole body, neonate N10.CNhs10518.761-6B444.29





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
gastrointestinal system7.65e-1647
intestine3.25e-1531
endoderm-derived structure6.00e-15118
endoderm6.00e-15118
presumptive endoderm6.00e-15118
digestive system2.42e-14116
digestive tract2.42e-14116
primitive gut2.42e-14116
digestive tract diverticulum1.03e-1323
sac1.03e-1323
liver1.42e-1322
epithelial sac1.42e-1322
digestive gland1.42e-1322
epithelium of foregut-midgut junction1.42e-1322
anatomical boundary1.42e-1322
hepatobiliary system1.42e-1322
foregut-midgut junction1.42e-1322
hepatic diverticulum1.42e-1322
liver primordium1.42e-1322
septum transversum1.42e-1322
liver bud1.42e-1322
subdivision of digestive tract3.09e-13114
exocrine gland1.72e-1025
exocrine system1.72e-1025
abdomen element1.92e-1049
abdominal segment element1.92e-1049
abdominal segment of trunk1.92e-1049
abdomen1.92e-1049
mucosa1.44e-0815
organ component layer4.23e-0824
trunk region element4.89e-0879
intestinal mucosa3.06e-0713
wall of intestine3.06e-0713
gastrointestinal system mucosa3.06e-0713
subdivision of trunk8.51e-0766
gut epithelium9.09e-0755
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