FFCP PHASE1:Mm9::chr4:149611803..149611814,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=100045967,100503183,13806,433182|HGNC=|UniProt=B1ARR6|association_with_transcript=0bp_to_ENSMUST00000141931_5end|description=CAGE_peak_6_at_LOC100045967_5end,CAGE_peak_6_at_LOC100503183_5end,CAGE_peak_7_at_Eno1_5end,CAGE_peak_8_at_Gm5506_5end|id=chr4:149611803..149611814,+|ontology_enrichment_celltype=CL:0000548!6.91e-16!115;CL:0000004!6.91e-16!115;CL:0000255!6.91e-16!115;CL:0000055!7.41e-16!50;CL:0002371!3.19e-15!118;CL:0000144!1.36e-14!121;CL:0000012!1.36e-14!121;CL:0002321!5.86e-14!70;CL:0000220!5.86e-14!70;CL:0000221!3.16e-12!44;CL:0000133!3.16e-12!44;CL:0002319!2.06e-11!43;CL:0000333!8.44e-11!10;CL:0000095!8.44e-11!10;CL:0000243!8.44e-11!10;CL:0000123!8.44e-11!10;CL:0000125!8.44e-11!10;CL:0000030!8.44e-11!10;CL:0000339!8.44e-11!10;CL:0000034!3.26e-10!97;CL:0000723!2.56e-09!91;CL:0000048!2.56e-09!91;CL:0000393!1.13e-08!39;CL:0000211!1.13e-08!39;CL:0002453!6.54e-08!8;CL:0000680!2.36e-07!6;CL:0000183!2.36e-07!6;CL:0000187!2.36e-07!6;CL:0000056!2.36e-07!6;CL:0000219!7.75e-07!54|ontology_enrichment_celltype_v019_2=CL:0002453,6.76e-13,8;CL:0000333,1.87e-10,10;CL:0000095,1.87e-10,10;CL:0000243,1.87e-10,10;CL:0000123,1.87e-10,10;CL:0000125,1.87e-10,10;CL:0000030,1.87e-10,10;CL:0000339,1.87e-10,10;CL:0000128,2.66e-08,6;CL:0000126,2.66e-08,6;CL:0000127,2.66e-08,6;CL:0000219,2.50e-07,54;CL:0002605,5.87e-07,2;CL:0002604,5.87e-07,2;CL:0000708,9.80e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000010!4.29e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0003210,9.80e-07,2|phase1_expression=0,0,0.454999239389536,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0.629484089877886,0.405507724878058,0.183546752161682,0,0,3.51497892375155,0.194429899074283,0.279972843250725,1.43752564364972,0,0,0,2.57259436035947,0.286533439938757,0,0,0,0,2.03306719241479,0.889294796111139,0.449949858640699,2.96659908770092,0,1.19840044207362,0.384218305321555,0.725827286159344,0,0,0,0,0,0.191690942036473,0.919218786610021,0,0.255374676170375,0,0,0.182975287204819,0,0,0,0.15279824777681,0,0,0.186399445825301,0.530083353332288,0.453429360640713,0,0,0.679971333707751,0,0,0,0.280888840263504,1.70430322578058,0.519572009205738,0.70667914902068,0.14084341977668,0,0,0,0,0,0.505524445014783,0,0,0.148442139064825,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.54390568381871,0,0,0,0,0.491804836130026,0,0.94652465824877,0.390438744296638,0.430846795465598,0,0.222798674082394,0,0,0.292255857911312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.665957860122194,3.40912655116008,0,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0.25347929989024,0,0,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0.0941093804153306,0,0,0.263069711437843,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p6@LOC100045967,p6@LOC100503183,p7@Eno1,p8@Gm5506}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=100045967,100503183,13806,433182 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=B1ARR6 | |||
|association_with_transcript=0bp_to_ENSMUST00000141931_5end | |||
|cluster_id=chr4:149611803..149611814,+ | |||
|description=CAGE_peak_6_at_LOC100045967_5end,CAGE_peak_6_at_LOC100503183_5end,CAGE_peak_7_at_Eno1_5end,CAGE_peak_8_at_Gm5506_5end | |||
|id=chr4:149611803..149611814,+ | |||
|ontology_enrichment_celltype=CL:0000548!6.91e-16!115;CL:0000004!6.91e-16!115;CL:0000255!6.91e-16!115;CL:0000055!7.41e-16!50;CL:0002371!3.19e-15!118;CL:0000144!1.36e-14!121;CL:0000012!1.36e-14!121;CL:0002321!5.86e-14!70;CL:0000220!5.86e-14!70;CL:0000221!3.16e-12!44;CL:0000133!3.16e-12!44;CL:0002319!2.06e-11!43;CL:0000333!8.44e-11!10;CL:0000095!8.44e-11!10;CL:0000243!8.44e-11!10;CL:0000123!8.44e-11!10;CL:0000125!8.44e-11!10;CL:0000030!8.44e-11!10;CL:0000339!8.44e-11!10;CL:0000034!3.26e-10!97;CL:0000723!2.56e-09!91;CL:0000048!2.56e-09!91;CL:0000393!1.13e-08!39;CL:0000211!1.13e-08!39;CL:0002453!6.54e-08!8;CL:0000680!2.36e-07!6;CL:0000183!2.36e-07!6;CL:0000187!2.36e-07!6;CL:0000056!2.36e-07!6;CL:0000219!7.75e-07!54 | |||
|ontology_enrichment_celltype_v019_2=CL:0002453,6.76e-13,8;CL:0000333,1.87e-10,10;CL:0000095,1.87e-10,10;CL:0000243,1.87e-10,10;CL:0000123,1.87e-10,10;CL:0000125,1.87e-10,10;CL:0000030,1.87e-10,10;CL:0000339,1.87e-10,10;CL:0000128,2.66e-08,6;CL:0000126,2.66e-08,6;CL:0000127,2.66e-08,6;CL:0000219,2.50e-07,54;CL:0002605,5.87e-07,2;CL:0002604,5.87e-07,2;CL:0000708,9.80e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000010!4.29e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003210,9.80e-07,2 | |||
|phase1_expression=0,0,0.454999239389536,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0.629484089877886,0.405507724878058,0.183546752161682,0,0,3.51497892375155,0.194429899074283,0.279972843250725,1.43752564364972,0,0,0,2.57259436035947,0.286533439938757,0,0,0,0,2.03306719241479,0.889294796111139,0.449949858640699,2.96659908770092,0,1.19840044207362,0.384218305321555,0.725827286159344,0,0,0,0,0,0.191690942036473,0.919218786610021,0,0.255374676170375,0,0,0.182975287204819,0,0,0,0.15279824777681,0,0,0.186399445825301,0.530083353332288,0.453429360640713,0,0,0.679971333707751,0,0,0,0.280888840263504,1.70430322578058,0.519572009205738,0.70667914902068,0.14084341977668,0,0,0,0,0,0.505524445014783,0,0,0.148442139064825,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.54390568381871,0,0,0,0,0.491804836130026,0,0.94652465824877,0.390438744296638,0.430846795465598,0,0.222798674082394,0,0,0.292255857911312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.665957860122194,3.40912655116008,0,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0.25347929989024,0,0,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0.0941093804153306,0,0,0.263069711437843,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p6@LOC100045967,p6@LOC100503183,p7@Eno1,p8@Gm5506 | |||
}} |
Latest revision as of 18:11, 26 September 2015
Short description: | p6@LOC100045967, p6@LOC100503183, p7@Eno1, p8@Gm5506 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_LOC100045967_5end, CAGE_peak_6_at_LOC100503183_5end, CAGE_peak_7_at_Eno1_5end, CAGE_peak_8_at_Gm5506_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000141931_5end |
EntrezGene: | 100045967,100503183,13806,433182 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 6.76e-13 | 8 |
migratory neural crest cell | 1.87e-10 | 10 |
neuron associated cell | 1.87e-10 | 10 |
glial cell (sensu Vertebrata) | 1.87e-10 | 10 |
neuron associated cell (sensu Vertebrata) | 1.87e-10 | 10 |
glial cell | 1.87e-10 | 10 |
glioblast | 1.87e-10 | 10 |
glioblast (sensu Vertebrata) | 1.87e-10 | 10 |
oligodendrocyte | 2.66e-08 | 6 |
macroglial cell | 2.66e-08 | 6 |
astrocyte | 2.66e-08 | 6 |
motile cell | 2.50e-07 | 54 |
astrocyte of the cerebral cortex | 5.87e-07 | 2 |
astrocyte of the hippocampus | 5.87e-07 | 2 |
leptomeningeal cell | 9.80e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
blood-cerebrospinal fluid barrier | 9.80e-07 | 2 |