FFCP PHASE1:Mm9::chr4:151505982..151505995,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr4:151505982..151505995,-
|short_description=p6@Espn
|description=CAGE_peak_6_at_Espn_5end
|association_with_transcript=-7bp_to_ENSMUST00000156517_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=56226 | |EntrezGene=56226 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-7bp_to_ENSMUST00000156517_5end | |||
|cluster_id=chr4:151505982..151505995,- | |||
|description=CAGE_peak_6_at_Espn_5end | |||
|id=chr4:151505982..151505995,- | |||
|ontology_enrichment_celltype=CL:0002563!5.64e-07!9;CL:0002251!5.64e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,2.25e-12,6;CL:0000677,2.25e-12,6;CL:0000584,2.25e-12,6;CL:0000075,1.77e-10,7;CL:0002563,5.95e-08,9;CL:0002251,5.95e-08,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!4.12e-20!43;UBERON:0005409!1.10e-19!59;UBERON:0001007!1.01e-11!128;UBERON:0001555!1.01e-11!128;UBERON:0007026!1.01e-11!128;UBERON:0004119!1.26e-11!130;UBERON:0000925!1.26e-11!130;UBERON:0006595!1.26e-11!130;UBERON:0000344!2.74e-11!15;UBERON:0004921!8.93e-11!126;UBERON:0004185!8.93e-11!126;UBERON:0001242!5.12e-10!13;UBERON:0000060!5.12e-10!13;UBERON:0001262!5.12e-10!13;UBERON:0004786!5.12e-10!13;UBERON:0004923!1.24e-07!24;UBERON:0000485!2.19e-07!11;UBERON:0003350!5.64e-07!9;UBERON:0004808!5.64e-07!9;UBERON:0001277!5.64e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.83e-21,31;UBERON:0005409,1.06e-18,47;UBERON:0000344,2.20e-17,15;UBERON:0001242,1.76e-14,13;UBERON:0001262,1.76e-14,13;UBERON:0004786,1.76e-14,13;UBERON:0004923,1.21e-13,24;UBERON:0002108,1.70e-08,4;UBERON:0003350,5.95e-08,9;UBERON:0004808,5.95e-08,9;UBERON:0001277,5.95e-08,9;UBERON:0000970,1.74e-07,9;UBERON:0000019,1.74e-07,9;UBERON:0000047,1.74e-07,9;UBERON:0010312,1.74e-07,9;UBERON:0004088,1.74e-07,9;UBERON:0002104,1.74e-07,9;UBERON:0001456,1.74e-07,9;UBERON:0003072,1.74e-07,9;UBERON:0004128,1.74e-07,9;UBERON:0003071,1.74e-07,9;UBERON:0001007,2.90e-07,116;UBERON:0001555,2.90e-07,116;UBERON:0007026,2.90e-07,116;UBERON:0004119,5.02e-07,118;UBERON:0000925,5.02e-07,118;UBERON:0006595,5.02e-07,118 | |||
|phase1_expression=0.480446541314382,2.09385244583617,2.72999543633722,3.93203474698879,2.50447864973174,4.70061961353291,3.97141489012394,1.03298658753261,1.40788722151667,1.17032263160997,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,1.11994695955385,1.83527424853736,1.72269589234506,1.7230479846363,1.50829862880122,2.85035129184561,4.78857246543868,1.10865255327652,0,0,0,0.866554859253824,0.997407872150954,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,2.719885334831,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0.649473123033642,0,0.505524445014783,0.22836775943812,0,0,0.346970653532272,0,0,0,0,0,3.95511948374998,0,0,0,0,0,1.86391761218122,0,0,5.10914110417183,0,0,0,0,0,0,0,0,0,0,0.407357455401265,0.124406970610093,0,0,0,0.689706313300419,1.0803727788321,3.76762044589288,5.64702942956021,3.71529788826064,3.93547243150861,1.03481348295606,0,0.189106080167819,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0.23674473558521,0.393528463494808,0,0,0,0,0,0,0,0,0,0,0,0,6.60837565967596,1.05780226665418,0.426576501070468,1.16118335930219,1.28867461322093,1.21010114774006,0.667134131534611,0.380451252225118,0.949058123089023,0.494096864172033,0.754005626400808,0,0.38992817423824,4.49409704327111,2.80979464837102,1.7922714592893,0.948339504765408,0.571242563048644,0,0.610953983535943,0.193952487167626,0.140271639780637,0.0632365371242573,0,0,0.246794327843601,0.296452627087149,0,0.196558995113203,0,0,0.241177159752417,0.50925170356284,0.575392274901621,0,0,0,0,0,0,0,0.482443521363367,0.184753190166605,0,0.651859905768103,0.678980343100753,0.234690248288502,0.167506257441816,0.476087281772027,0.195133647857799,0,0,0,0,0.172684981865896,0,0,0,0,0.551873492609465,0,0,0,0,0,0,0,0.238968797952552,0.222798674082394,0.566153061577665,0,0.292255857911312,0,0,0,0.178065603667255,0,0,0,0.971122544619926,3.62788268357701,3.58349651536206,2.06711325016541,2.76691633149535,0.775284879504663,0.727067458955011,1.06949213515416,0,0,0,0,0.18006109403131,0.905510786479282,0.643011105094777,1.06404140185364,0.713475270408282,1.15184314421485,1.2178597964584,0,0.21183207086382,0,0.16488625294148,0.322928853391811,0.120625849856312,0.119372344003136,0,3.78925087618806,0,0,1.65109494370578,0,0,0,0,0,0,0,0.954670618015114,0.316335993581135,1.01659733563424,0.216010681643603,0,0.218362563746178,0.134864346384821,0.330613822901344,1.30877970992015,4.14767914533737,0.621339313086926,0.56369293868419,0,0,0,0,0,0,0,0,0.241584120826006,0,0,0,0.205421914329655,0,0.179026695667481,0,0,0.147689527174577,0.100966449948148,0,0,0.292373642219257,0.0962118416403295,0.233753804363138,0,0.221985953374065,0,0.671538465456314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,0.486213434136588,0,0.183843508450014,0,0.206035057238894,0.320919209591815,0,0,0.188626341386076,0.280924522409647,0.256100609619477,0.17230640686684,0.476293691283074,0.347652977834566,0.38581844092741,0.412085900803307,0.147198920134397,0,0.177475806159338,0.238436189947321,0.145346416632329,0.188218760830661,0.25384382367503,0,0,0.407412341537585,0,0.237270036248348,0.492522411877817,0,0,0.385813221962283,0.249810577937946,0.233931608445408,0,0,0,0 | |phase1_expression=0.480446541314382,2.09385244583617,2.72999543633722,3.93203474698879,2.50447864973174,4.70061961353291,3.97141489012394,1.03298658753261,1.40788722151667,1.17032263160997,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,1.11994695955385,1.83527424853736,1.72269589234506,1.7230479846363,1.50829862880122,2.85035129184561,4.78857246543868,1.10865255327652,0,0,0,0.866554859253824,0.997407872150954,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,2.719885334831,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0.649473123033642,0,0.505524445014783,0.22836775943812,0,0,0.346970653532272,0,0,0,0,0,3.95511948374998,0,0,0,0,0,1.86391761218122,0,0,5.10914110417183,0,0,0,0,0,0,0,0,0,0,0.407357455401265,0.124406970610093,0,0,0,0.689706313300419,1.0803727788321,3.76762044589288,5.64702942956021,3.71529788826064,3.93547243150861,1.03481348295606,0,0.189106080167819,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0.23674473558521,0.393528463494808,0,0,0,0,0,0,0,0,0,0,0,0,6.60837565967596,1.05780226665418,0.426576501070468,1.16118335930219,1.28867461322093,1.21010114774006,0.667134131534611,0.380451252225118,0.949058123089023,0.494096864172033,0.754005626400808,0,0.38992817423824,4.49409704327111,2.80979464837102,1.7922714592893,0.948339504765408,0.571242563048644,0,0.610953983535943,0.193952487167626,0.140271639780637,0.0632365371242573,0,0,0.246794327843601,0.296452627087149,0,0.196558995113203,0,0,0.241177159752417,0.50925170356284,0.575392274901621,0,0,0,0,0,0,0,0.482443521363367,0.184753190166605,0,0.651859905768103,0.678980343100753,0.234690248288502,0.167506257441816,0.476087281772027,0.195133647857799,0,0,0,0,0.172684981865896,0,0,0,0,0.551873492609465,0,0,0,0,0,0,0,0.238968797952552,0.222798674082394,0.566153061577665,0,0.292255857911312,0,0,0,0.178065603667255,0,0,0,0.971122544619926,3.62788268357701,3.58349651536206,2.06711325016541,2.76691633149535,0.775284879504663,0.727067458955011,1.06949213515416,0,0,0,0,0.18006109403131,0.905510786479282,0.643011105094777,1.06404140185364,0.713475270408282,1.15184314421485,1.2178597964584,0,0.21183207086382,0,0.16488625294148,0.322928853391811,0.120625849856312,0.119372344003136,0,3.78925087618806,0,0,1.65109494370578,0,0,0,0,0,0,0,0.954670618015114,0.316335993581135,1.01659733563424,0.216010681643603,0,0.218362563746178,0.134864346384821,0.330613822901344,1.30877970992015,4.14767914533737,0.621339313086926,0.56369293868419,0,0,0,0,0,0,0,0,0.241584120826006,0,0,0,0.205421914329655,0,0.179026695667481,0,0,0.147689527174577,0.100966449948148,0,0,0.292373642219257,0.0962118416403295,0.233753804363138,0,0.221985953374065,0,0.671538465456314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,0.486213434136588,0,0.183843508450014,0,0.206035057238894,0.320919209591815,0,0,0.188626341386076,0.280924522409647,0.256100609619477,0.17230640686684,0.476293691283074,0.347652977834566,0.38581844092741,0.412085900803307,0.147198920134397,0,0.177475806159338,0.238436189947321,0.145346416632329,0.188218760830661,0.25384382367503,0,0,0.407412341537585,0,0.237270036248348,0.492522411877817,0,0,0.385813221962283,0.249810577937946,0.233931608445408,0,0,0,0 | ||
|short_description=p6@Espn | |||
}} | }} |
Latest revision as of 18:54, 26 September 2015
Short description: | p6@Espn |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Espn_5end |
Coexpression cluster: | NA |
Association with transcript: | -7bp_to_ENSMUST00000156517_5end |
EntrezGene: | Espn |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 2.25e-12 | 6 |
gut absorptive cell | 2.25e-12 | 6 |
enterocyte | 2.25e-12 | 6 |
columnar/cuboidal epithelial cell | 1.77e-10 | 7 |
intestinal epithelial cell | 5.95e-08 | 9 |
epithelial cell of alimentary canal | 5.95e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.83e-21 | 31 |
gastrointestinal system | 1.06e-18 | 47 |
mucosa | 2.20e-17 | 15 |
intestinal mucosa | 1.76e-14 | 13 |
wall of intestine | 1.76e-14 | 13 |
gastrointestinal system mucosa | 1.76e-14 | 13 |
organ component layer | 1.21e-13 | 24 |
small intestine | 1.70e-08 | 4 |
epithelium of mucosa | 5.95e-08 | 9 |
gastrointestinal system epithelium | 5.95e-08 | 9 |
intestinal epithelium | 5.95e-08 | 9 |
eye | 1.74e-07 | 9 |
camera-type eye | 1.74e-07 | 9 |
simple eye | 1.74e-07 | 9 |
immature eye | 1.74e-07 | 9 |
ocular region | 1.74e-07 | 9 |
visual system | 1.74e-07 | 9 |
face | 1.74e-07 | 9 |
optic cup | 1.74e-07 | 9 |
optic vesicle | 1.74e-07 | 9 |
eye primordium | 1.74e-07 | 9 |
digestive system | 2.90e-07 | 116 |
digestive tract | 2.90e-07 | 116 |
primitive gut | 2.90e-07 | 116 |
endoderm-derived structure | 5.02e-07 | 118 |
endoderm | 5.02e-07 | 118 |
presumptive endoderm | 5.02e-07 | 118 |