FFCP PHASE1:Mm9::chr9:50885169..50885205,-: Difference between revisions
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{{FFCP|EntrezGene=244864|HGNC=|MCL_coexpression_id=2499|UniProt=E9QN84,Q8C351,A4QPF5|association_with_transcript=0bp_to_ENSMUST00000073452,ENSMUST00000098782,ENSMUST00000164790,NM_001033534,uc012gtc.1_5end|description=CAGE_peak_2_at_Layn_5end|id=chr9:50885169..50885205,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004535!2.24e-10!23;UBERON:0001009!2.24e-10!23;UBERON:0003103!2.89e-08!43;UBERON:0004872!1.39e-07!33;UBERON:0007100!1.44e-07!18;UBERON:0000948!1.44e-07!18;UBERON:0005498!1.44e-07!18;UBERON:0004140!1.44e-07!18;UBERON:0009881!1.44e-07!18;UBERON:0004141!1.44e-07!18;UBERON:0003084!1.44e-07!18;UBERON:0007005!1.44e-07!18;UBERON:0004139!1.44e-07!18;UBERON:0004291!1.44e-07!18;UBERON:0000025!6.72e-07!114;UBERON:0004111!8.62e-07!122|ontology_enrichment_uberon_v019_2=UBERON:0004535,1.23e-10,23;UBERON:0001009,1.23e-10,23;UBERON:0003103,3.55e-08,43;UBERON:0007100,9.56e-08,18;UBERON:0000948,9.56e-08,18;UBERON:0005498,9.56e-08,18;UBERON:0004140,9.56e-08,18;UBERON:0009881,9.56e-08,18;UBERON:0004141,9.56e-08,18;UBERON:0003084,9.56e-08,18;UBERON:0007005,9.56e-08,18;UBERON:0004139,9.56e-08,18;UBERON:0004291,9.56e-08,18;UBERON:0004872,5.27e-07,33|phase1_expression=2.7225304007815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12608225377674,0.198581902401771,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0.204169356262369,0.418531630736908,0,0.523523743973798,0,0.683045484958446,0,27.3196095007003,25.2428558736591,17.6204882075214,0.782391344348039,8.72100625521786,23.0670491871195,21.5817187972455,13.2987100544094,11.5002051491977,0,0,0,52.9954438234051,36.3897468722221,22.6895720602075,0.202316460859598,0,0,5.42151251310611,7.11435836888911,4.94944844504769,5.93319817540185,3.5524005747305,4.49400165777607,4.61061966385865,0.829516898467821,0.405017814995072,0.420649922702764,6.85562362569129,6.62605622854841,0.122490799214954,0.479227355091182,0.919218786610021,0,1.78762273319263,2.30409799884365,0.263772575460388,0.731901148819277,1.56274011167028,3.07101298901519,2.25105044012672,1.68078072554491,3.24091444021034,4.55589378557129,1.3047961207771,14.6151553133045,27.2813331985496,13.9134954576805,3.44169550792555,0,0,0.649776417447669,0,0.983110940922263,20.4516387093669,12.4697282209377,14.1335829804136,0.281686839553361,16.6824420638613,7.64415719119937,0,0.649473123033642,0.506719730950197,0.505524445014783,1.7127581957859,3.6251303710604,3.71105347662062,3.46970653532272,2.13125834818499,1.84492397804847,2.86373017049983,3.17489509266403,4.77533047052767,1.48316980640624,4.33798070759735,6.19227386364912,2.42650274921114,1.54589062922275,0.484875253135222,0,2.92780797011547,3.77004072264219,1.02182822083437,2.15667224110656,1.79970819298022,3.17675567682662,2.09706895166752,1.83000241127451,0,2.25971616249959,2.30143911597297,2.0778804455956,1.46017136760982,3.97173519016234,4.10543003013307,1.0108910337347,1.26265113531884,1.17108398666433,1.37941262660084,1.80062129805349,1.65775299619287,1.63287597963187,1.92170580427275,1.3118241438362,1.55222022443409,0.862271971731369,1.70195472151037,2.11141348996739,1.31517439456545,1.94633074457919,4.179025998266,2.26360350048738,2.58744546864041,5.61770549850588,2.83082697826187,2.84163499395593,2.69263504296152,3.51789089971644,3.78130329068131,6.62885259638589,5.1158700254325,3.08534225774756,4.65067889500816,4.56064782379353,4.67061369468678,3.12663714835613,4.76085645829376,6.24229833503089,4.09359964790931,3.51280184465681,7.51555945058082,1.89260953707715,2.05809224758569,0,0,1.2797295032114,0.232236671860439,1.15980715189884,1.21010114774006,1.33426826306922,1.33157938278791,0.474529061544512,1.81168850196412,0.754005626400808,2.38747766449381,1.9496408711912,0,1.29682829924817,1.1948476395262,2.46568271239006,1.71372768914593,5.63538678365402,1.22190796707189,3.10323979468201,3.15611189506434,3.47800954183415,4.87113488332687,4.39596437955849,5.18268088471562,0.889357881261447,1.00107063429656,0.589676985339609,0.449724224769707,0.811440485554012,0.72353147925725,1.2731292589071,2.01387296215567,1.62135226775035,1.09824565275233,0,2.23284568601102,2.49630138491648,2.27320990152401,0.717589654087649,1.4473305640901,6.28160846566456,1.32643988239339,1.95557971730431,2.71592137240301,2.58159273117352,3.35012514883632,3.80869825417622,4.87834119644497,6.46304090835383,6.64394068946325,7.65382889555938,6.882259218061,6.38934432903814,6.94315481191256,3.01582567878545,8.70249094109935,0.983528546038072,1.37968373152366,4.0137647496948,2.93029216480508,11.9672510124973,3.53459298086122,3.47059041357882,3.51394869866975,0.430846795465598,3.10659437338318,4.45597348164788,2.26461224631066,4.04810701674894,4.67609372658099,4.74345333535828,2.57057053137446,4.9679029822894,5.52003371368491,7.00413925220377,5.44401405809367,0,0,1.51161778482376,2.64047111658257,1.77181135728464,1.53717573971964,1.55056975900933,1.81766864738753,3.20847640546249,3.1603675793581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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=244864 | |||
|HGNC= | |||
|MCL_coexpression_id=2499 | |||
|TSSclassifier=NA | |||
|UniProt=E9QN84,Q8C351,A4QPF5 | |||
|association_with_transcript=0bp_to_ENSMUST00000073452,ENSMUST00000098782,ENSMUST00000164790,NM_001033534,uc012gtc.1_5end | |||
|cluster_id=chr9:50885169..50885205,- | |||
|description=CAGE_peak_2_at_Layn_5end | |||
|id=chr9:50885169..50885205,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!2.24e-10!23;UBERON:0001009!2.24e-10!23;UBERON:0003103!2.89e-08!43;UBERON:0004872!1.39e-07!33;UBERON:0007100!1.44e-07!18;UBERON:0000948!1.44e-07!18;UBERON:0005498!1.44e-07!18;UBERON:0004140!1.44e-07!18;UBERON:0009881!1.44e-07!18;UBERON:0004141!1.44e-07!18;UBERON:0003084!1.44e-07!18;UBERON:0007005!1.44e-07!18;UBERON:0004139!1.44e-07!18;UBERON:0004291!1.44e-07!18;UBERON:0000025!6.72e-07!114;UBERON:0004111!8.62e-07!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004535,1.23e-10,23;UBERON:0001009,1.23e-10,23;UBERON:0003103,3.55e-08,43;UBERON:0007100,9.56e-08,18;UBERON:0000948,9.56e-08,18;UBERON:0005498,9.56e-08,18;UBERON:0004140,9.56e-08,18;UBERON:0009881,9.56e-08,18;UBERON:0004141,9.56e-08,18;UBERON:0003084,9.56e-08,18;UBERON:0007005,9.56e-08,18;UBERON:0004139,9.56e-08,18;UBERON:0004291,9.56e-08,18;UBERON:0004872,5.27e-07,33 | |||
|phase1_expression=2.7225304007815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12608225377674,0.198581902401771,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0.204169356262369,0.418531630736908,0,0.523523743973798,0,0.683045484958446,0,27.3196095007003,25.2428558736591,17.6204882075214,0.782391344348039,8.72100625521786,23.0670491871195,21.5817187972455,13.2987100544094,11.5002051491977,0,0,0,52.9954438234051,36.3897468722221,22.6895720602075,0.202316460859598,0,0,5.42151251310611,7.11435836888911,4.94944844504769,5.93319817540185,3.5524005747305,4.49400165777607,4.61061966385865,0.829516898467821,0.405017814995072,0.420649922702764,6.85562362569129,6.62605622854841,0.122490799214954,0.479227355091182,0.919218786610021,0,1.78762273319263,2.30409799884365,0.263772575460388,0.731901148819277,1.56274011167028,3.07101298901519,2.25105044012672,1.68078072554491,3.24091444021034,4.55589378557129,1.3047961207771,14.6151553133045,27.2813331985496,13.9134954576805,3.44169550792555,0,0,0.649776417447669,0,0.983110940922263,20.4516387093669,12.4697282209377,14.1335829804136,0.281686839553361,16.6824420638613,7.64415719119937,0,0.649473123033642,0.506719730950197,0.505524445014783,1.7127581957859,3.6251303710604,3.71105347662062,3.46970653532272,2.13125834818499,1.84492397804847,2.86373017049983,3.17489509266403,4.77533047052767,1.48316980640624,4.33798070759735,6.19227386364912,2.42650274921114,1.54589062922275,0.484875253135222,0,2.92780797011547,3.77004072264219,1.02182822083437,2.15667224110656,1.79970819298022,3.17675567682662,2.09706895166752,1.83000241127451,0,2.25971616249959,2.30143911597297,2.0778804455956,1.46017136760982,3.97173519016234,4.10543003013307,1.0108910337347,1.26265113531884,1.17108398666433,1.37941262660084,1.80062129805349,1.65775299619287,1.63287597963187,1.92170580427275,1.3118241438362,1.55222022443409,0.862271971731369,1.70195472151037,2.11141348996739,1.31517439456545,1.94633074457919,4.179025998266,2.26360350048738,2.58744546864041,5.61770549850588,2.83082697826187,2.84163499395593,2.69263504296152,3.51789089971644,3.78130329068131,6.62885259638589,5.1158700254325,3.08534225774756,4.65067889500816,4.56064782379353,4.67061369468678,3.12663714835613,4.76085645829376,6.24229833503089,4.09359964790931,3.51280184465681,7.51555945058082,1.89260953707715,2.05809224758569,0,0,1.2797295032114,0.232236671860439,1.15980715189884,1.21010114774006,1.33426826306922,1.33157938278791,0.474529061544512,1.81168850196412,0.754005626400808,2.38747766449381,1.9496408711912,0,1.29682829924817,1.1948476395262,2.46568271239006,1.71372768914593,5.63538678365402,1.22190796707189,3.10323979468201,3.15611189506434,3.47800954183415,4.87113488332687,4.39596437955849,5.18268088471562,0.889357881261447,1.00107063429656,0.589676985339609,0.449724224769707,0.811440485554012,0.72353147925725,1.2731292589071,2.01387296215567,1.62135226775035,1.09824565275233,0,2.23284568601102,2.49630138491648,2.27320990152401,0.717589654087649,1.4473305640901,6.28160846566456,1.32643988239339,1.95557971730431,2.71592137240301,2.58159273117352,3.35012514883632,3.80869825417622,4.87834119644497,6.46304090835383,6.64394068946325,7.65382889555938,6.882259218061,6.38934432903814,6.94315481191256,3.01582567878545,8.70249094109935,0.983528546038072,1.37968373152366,4.0137647496948,2.93029216480508,11.9672510124973,3.53459298086122,3.47059041357882,3.51394869866975,0.430846795465598,3.10659437338318,4.45597348164788,2.26461224631066,4.04810701674894,4.67609372658099,4.74345333535828,2.57057053137446,4.9679029822894,5.52003371368491,7.00413925220377,5.44401405809367,0,0,1.51161778482376,2.64047111658257,1.77181135728464,1.53717573971964,1.55056975900933,1.81766864738753,3.20847640546249,3.16036757935816,2.10837217149998,4.12542172992747,0.340439605753788,1.44048875225048,1.16422815404479,2.14337035031592,2.6601035046341,2.31879462882692,4.11372551505302,4.56697423671899,0.938686832254841,0.42366414172764,2.42581237860458,5.44124634706884,1.93757312035087,1.5078231232039,1.43246812803764,1.47726809770555,1.7488850197791,7.04616147639937,1.53783792718067,4.95328483111734,0.740778109478847,2.0720530270516,0.683471138605126,0.915112692826091,3.90950388985867,4.61839792668071,5.8043988997858,0,1.42351197111511,1.21991680276109,2.37611749807963,1.88179466413022,1.9652630737156,1.75323650300267,2.72756403893609,1.57053565190418,1.68499465279331,0.621339313086926,0.56369293868419,3.13984746692355,3.47462829959905,3.50012139019286,4.00395452780966,5.23763989021412,5.28107573905893,3.1249052362548,1.99232754408851,0.966336483304024,0.864090018773596,0.632022241256357,4.86540516696394,2.56777392912068,0.909445760844565,0.537080087002444,0.596044064343795,0.841368146639782,0.443068581523732,0.706765149637033,0.457240839929999,0.302478555410522,0.194915761479505,0.481059208201647,0.935015217452552,2.0405734525369,0,0.0897138566094757,0.671538465456314,3.67060228661162,13.5131382324851,2.38097111547445,3.42989406526505,1.00314420807073,3.3885110557024,4.1429271285645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| |||
|short_description=p2@Layn | |||
}} |
Latest revision as of 19:43, 26 September 2015
Short description: | p2@Layn |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Layn_5end |
Coexpression cluster: | MCL_coexpression_mm9:2499 |
Association with transcript: | 0bp_to_ENSMUST00000073452, ENSMUST00000098782, ENSMUST00000164790, NM_001033534, uc012gtc.1_5end |
EntrezGene: | Layn |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiovascular system | 1.23e-10 | 23 |
circulatory system | 1.23e-10 | 23 |
compound organ | 3.55e-08 | 43 |
primary circulatory organ | 9.56e-08 | 18 |
heart | 9.56e-08 | 18 |
primitive heart tube | 9.56e-08 | 18 |
primary heart field | 9.56e-08 | 18 |
anterior lateral plate mesoderm | 9.56e-08 | 18 |
heart tube | 9.56e-08 | 18 |
heart primordium | 9.56e-08 | 18 |
cardiac mesoderm | 9.56e-08 | 18 |
cardiogenic plate | 9.56e-08 | 18 |
heart rudiment | 9.56e-08 | 18 |
splanchnic layer of lateral plate mesoderm | 5.27e-07 | 33 |