FFCP PHASE1:Mm9::chr15:59146750..59146765,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=20775 | |EntrezGene=20775 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=0 | |||
|TSSclassifier=NA | |||
|UniProt=Q3TSS7 | |UniProt=Q3TSS7 | ||
|association_with_transcript=88bp_to_ENSMUST00000100640_5end | |association_with_transcript=88bp_to_ENSMUST00000100640_5end | ||
|cluster_id=chr15:59146750..59146765,+ | |||
|description=CAGE_peak_4_at_Sqle_5end | |description=CAGE_peak_4_at_Sqle_5end | ||
|id=chr15:59146750..59146765,+ | |id=chr15:59146750..59146765,+ | ||
|ontology_enrichment_celltype=CL:0000055!6.70e-07!50 | |ontology_enrichment_celltype=CL:0000055!6.70e-07!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000192,2.23e-08,3;CL:0000359,2.23e-08,3;CL:0002539,2.23e-08,3;CL:0000514,2.23e-08,3;CL:0002612,2.70e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!2.07e-07!102;UBERON:0000924!2.07e-07!102;UBERON:0006601!2.07e-07!102 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001948,3.18e-11,5;UBERON:0002315,3.18e-11,5;UBERON:0002240,2.70e-09,6;UBERON:0005174,2.70e-09,6;UBERON:0001137,2.70e-09,6;UBERON:0001135,2.23e-08,3;UBERON:0004237,2.23e-08,3;UBERON:0004695,2.23e-08,3;UBERON:0002111,2.23e-08,3;UBERON:0004178,2.23e-08,3;UBERON:0000473,8.96e-08,14;UBERON:0002257,2.70e-07,3;UBERON:0003135,3.51e-07,15 | |||
|phase1_expression=0.80074423552397,0,0.454999239389536,0,0,0.33575854382378,0,0.387369970324729,0.84473233291,2.10658073689794,0,0.159544317990673,0,0.0874204024189974,0,0,0,0,0,0,5.01755411891312,0.198581902401771,0.261199789138935,0.319984845586813,0.45881856213434,0,0,0,0.760093677825496,0.756090389279792,0.665191531965914,0.635030673459631,0.61506478758457,0,0.288851619751275,0.166234645358492,0.204169356262369,0,0,0,0,0,0,3.27331726736501,1.92616169317078,6.05704282133549,0.782391344348039,0.872100625521786,0.659058548203415,1.55543919259427,1.25987779462826,0,0.167782606057736,0,0,0.514518872071894,0.286533439938757,0,0.809265843438391,0.528990979272033,1.26766280701236,0.677689064138264,3.55717918444456,0,0,0,0.299600110518405,1.53687322128622,0.311068836925433,0,0,1.42825492201902,1.54607978666129,0.244981598429908,0.191690942036473,0.919218786610021,0,0.255374676170375,0.46081959976873,0.659431438650969,1.09785172322892,1.56274011167028,1.11673199600552,0.56276261003168,0.916789486660861,1.47314292736834,1.28134512719193,1.4911955666024,0.530083353332288,1.058001841495,0.869593466105033,0,2.719885334831,0,0.649776417447669,0,0.702222100658759,0.681721290312231,0.259786004602869,0.70667914902068,0.281686839553361,1.28326477414318,0,0,0.649473123033642,0.506719730950197,0,0.5709193985953,0.517875767294343,0.29688427812965,0.867426633830679,0,0.230615497256059,0.150722640552623,0.23517741427141,0,1.97755974187499,0,0,0.161766849947409,0,0,0,0,0,0,0.11981512450592,0.599902730993408,0.127070227073065,0.149790639404823,0,1.25654352112864,0.173824320192276,0.255715457330331,0.20778804455956,0.162241263067758,0.101839363850316,0.124406970610093,0.505445516867349,6.31325567659422,0.260240885925407,0.459804208866946,1.26043490863744,0.150704817835715,0.680364991513279,0.768682321709099,0.281105173679186,3.10444044886819,0.431135985865684,0,0.175951124163949,0.43839146485515,0,0.348252166522167,0.205782136407943,0.199034266818493,0,0,0,0.414251545071004,0.234526059981096,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0.514523061896422,0.330418782983798,0,0.213288250535234,0.464473343720877,0.257734922644187,0.605050573870028,0,0.190225626112559,0,0,0,0.397912944082302,0,0,0,0.199141273254367,0,0.228497025219458,0,0.203651327845314,0,0.420814919341911,0.126473074248515,0,0.470996183524124,0,0,0,0.196558995113203,0.674586337154561,0.202860121388503,0,0.50925170356284,0,0,0,0,0.372140947668503,0.312037673114561,0,0.538192240565737,0.482443521363367,0.184753190166605,0,0.162964976442026,0.169745085775188,0,0,0.476087281772027,0,0.157635144106191,0,0,0.163863314715738,0,0,0,0,1.47529281905711,0.275936746304732,0.481651769963376,0.35163505977661,0.327869890753351,0,0,0,0.861693590931196,0,0.445597348164788,0.283076530788832,0.404810701674894,0,0,0,0.283880170416537,0.178065603667255,0.488660878060728,0,0,0.242780636154981,0,0,0.295301892880773,0,0.258428293168221,0,0.712994756769443,0,1.05418608574999,0,0.340439605753788,0.18006109403131,0.388076051348264,0.214337035031592,0.354680467284547,0,0.329098041204242,0.913394847343798,0.469343416127421,0.42366414172764,0,0.8244312647074,0.807322133479528,0.361877549568935,0.358117032009409,1.47726809770555,0,0.18542530201051,0.170870880797853,0,0,0,0,0,0.169978429993855,0.279902904647316,0.138199973804424,0.954670618015114,0.158167996790568,0.203319467126849,0.540026704109006,1.04544148007234,0.436725127492355,0.674321731924103,0.495920734352016,1.04702376793612,0,0,21.4203316699992,0.598066184175915,1.32366792365678,1.75006069509643,1.6790777052105,1.35164900392623,0.469428954583016,0.2604087696879,0.104859344425711,6.03960302065015,13.8254403003775,0.632022241256357,0.202725215290164,0.718976700153791,0.389762468933385,0,0.596044064343795,0,0.295379054349154,0.201932899896295,0.15241361331,0,0,0.192423683280659,0,0.226730383615211,0,0.0897138566094757,0.335769232728157,0.19318959403219,0.375364950902364,0,1.2862102744744,0,1.12950368523413,0,0.572895513439397,0.171853182343688,0,0.755393897389701,0.675022500231806,0.45032120322422,0,0,0.31136204275253,0,0.170733605754134,0.243106717068294,0.209613162627982,0.183843508450014,0.222246727801615,0.206035057238894,0,0.252697211763798,0.25347929989024,0.565879024158229,0.37456602987953,0.128050304809739,0.631790158511746,0,0.463537303779422,0.77163688185482,0.412085900803307,0.294397840268795,0,0.354951612318675,0.715308569841963,0,0.188218760830661,0.25384382367503,0.182927972872773,0.526139422875686,0.135804113845862,0,0.474540072496697,0.29551344712669,0.818462086339379,0.309873682371932,0.578719832943424,0,0,0.214871054048298,0,0.441182838239031,0.463735671240843 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| ||
|short_description=p4@Sqle | |short_description=p4@Sqle | ||
}} | }} |
Latest revision as of 20:48, 26 September 2015
Short description: | p4@Sqle |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Sqle_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 88bp_to_ENSMUST00000100640_5end |
EntrezGene: | Sqle |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 2.23e-08 | 3 |
vascular associated smooth muscle cell | 2.23e-08 | 3 |
aortic smooth muscle cell | 2.23e-08 | 3 |
smooth muscle myoblast | 2.23e-08 | 3 |
neuron of the ventral spinal cord | 2.70e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
regional part of spinal cord | 3.18e-11 | 5 |
gray matter of spinal cord | 3.18e-11 | 5 |
spinal cord | 2.70e-09 | 6 |
dorsal region element | 2.70e-09 | 6 |
dorsum | 2.70e-09 | 6 |
smooth muscle tissue | 2.23e-08 | 3 |
blood vessel smooth muscle | 2.23e-08 | 3 |
arterial system smooth muscle | 2.23e-08 | 3 |
artery smooth muscle tissue | 2.23e-08 | 3 |
aorta smooth muscle tissue | 2.23e-08 | 3 |
testis | 8.96e-08 | 14 |
ventral horn of spinal cord | 2.70e-07 | 3 |
male reproductive organ | 3.51e-07 | 15 |