Personal tools

FFCP PHASE1:Mm9::chr2:67284032..67284040,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=241431
|EntrezGene=241431
|HGNC=
|HGNC=
|MCL_coexpression_id=35
|TSSclassifier=NA
|UniProt=Q4U4S6,B2BBR6
|UniProt=Q4U4S6,B2BBR6
|association_with_transcript=-18bp_to_ENSMUST00000028410,ENSMUST00000112347,NM_001024618,NM_001083919,uc008jxj.1,uc008jxk.1,uc012bwm.1_5end
|association_with_transcript=-18bp_to_ENSMUST00000028410,ENSMUST00000112347,NM_001024618,NM_001083919,uc008jxj.1,uc008jxk.1,uc012bwm.1_5end
|cluster_id=chr2:67284032..67284040,+
|description=CAGE_peak_2_at_Xirp2_5end
|description=CAGE_peak_2_at_Xirp2_5end
|id=chr2:67284032..67284040,+
|id=chr2:67284032..67284040,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=
|ontology_enrichment_uberon_v019_2=UBERON:0005418,1.22e-07,5;UBERON:0002472,1.22e-07,5;UBERON:0008784,1.22e-07,5;UBERON:0006058,1.22e-07,5;UBERON:0004709,1.22e-07,5;UBERON:0002529,1.22e-07,5;UBERON:0010538,1.22e-07,5;UBERON:0005420,1.22e-07,5;UBERON:0010758,1.22e-07,5;UBERON:0000978,1.22e-07,5;UBERON:0002103,1.22e-07,5;UBERON:0000376,1.22e-07,5;UBERON:0000154,1.22e-07,5;UBERON:0010709,1.22e-07,5;UBERON:0005730,1.22e-07,5
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.05599912474307,0,0,0,0,0,0,0,0,0,0,1.37020655662872,0,0,0,0,0,0,0.117588707135705,0,0,0,1.76922110389975,1.94120219936891,2.87093973998512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7416975885413,0,0.631325567659422,0,0,0,0.150704817835715,0.272145996605311,0,0.281105173679186,1.29351685369508,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0.308534225774757,0.697601834251224,0.804820204198858,0.700592054203017,0.493679549740441,2.79084688934462,4.45878452502207,3.36259971078264,5.26920276698522,6.84452735677896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,4.31304619582064,0,0.312037673114561,0,1.07638448113147,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0.491589944147214,0.345369963731791,0,0,0,0,0,0,0,0,16.6630811954886,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.882113592219848,4.122156323537,1.29171541356724,0.72375509913787,0.119372344003136,0.492422699235184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165306911450672,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0.864090018773596,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.0167103316062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.729320151204882,0,0,0.44449345560323,0.618105171716683,1.60459604795908,2.02157769411038,1.52087579934144,3.01802146217722,1.591905626988,1.08842759088278,1.03383844120104,1.90517476513229,1.27472758539341,0.77163688185482,1.64834360321323,1.61918812147837,2.05721551431249,0.887379030796687,1.43061713968393,2.0348498328526,1.31753132581463,2.11536519729191,1.09756783723664,1.31534855718921,0.679020569229309,1.12228454331548,1.30498519936592,0.788035859004508,1.63692417267876,0.929621047115796,0.192906610981141,0.749431733813838,0.701794825336225,1.50409737833809,3.44318997723918,2.64709702943419,6.26043156175138
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.05599912474307,0,0,0,0,0,0,0,0,0,0,1.37020655662872,0,0,0,0,0,0,0.117588707135705,0,0,0,1.76922110389975,1.94120219936891,2.87093973998512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7416975885413,0,0.631325567659422,0,0,0,0.150704817835715,0.272145996605311,0,0.281105173679186,1.29351685369508,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0.308534225774757,0.697601834251224,0.804820204198858,0.700592054203017,0.493679549740441,2.79084688934462,4.45878452502207,3.36259971078264,5.26920276698522,6.84452735677896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,4.31304619582064,0,0.312037673114561,0,1.07638448113147,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0.491589944147214,0.345369963731791,0,0,0,0,0,0,0,0,16.6630811954886,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.882113592219848,4.122156323537,1.29171541356724,0.72375509913787,0.119372344003136,0.492422699235184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165306911450672,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0.864090018773596,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.0167103316062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.729320151204882,0,0,0.44449345560323,0.618105171716683,1.60459604795908,2.02157769411038,1.52087579934144,3.01802146217722,1.591905626988,1.08842759088278,1.03383844120104,1.90517476513229,1.27472758539341,0.77163688185482,1.64834360321323,1.61918812147837,2.05721551431249,0.887379030796687,1.43061713968393,2.0348498328526,1.31753132581463,2.11536519729191,1.09756783723664,1.31534855718921,0.679020569229309,1.12228454331548,1.30498519936592,0.788035859004508,1.63692417267876,0.929621047115796,0.192906610981141,0.749431733813838,0.701794825336225,1.50409737833809,3.44318997723918,2.64709702943419,6.26043156175138
|short_description=p2@Xirp2
|short_description=p2@Xirp2
}}
}}

Latest revision as of 21:00, 26 September 2015

Short description:p2@Xirp2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Xirp2_5end
Coexpression cluster:MCL_coexpression_mm9:35
Association with transcript: -18bp_to_ENSMUST00000028410, ENSMUST00000112347, NM_001024618, NM_001083919, uc008jxj.1, uc008jxk.1, uc012bwm.1_5end
EntrezGene:Xirp2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression



0
5
10
15
20




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr2:67284032..67284040,%2B&oldid=4274096"