FFCP PHASE1:Mm9::chr6:145902097..145902104,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=16651|HGNC=|MCL_coexpression_id=77|UniProt=E9Q8Y7|association_with_transcript=148bp_to_ENSMUST00000111701_5end|description=CAGE_peak_3_at_Sspn_5end|id=chr6:145902097..145902104,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003135!3.30e-52!15;UBERON:0003101!7.85e-49!16;UBERON:0000079!7.85e-49!16;UBERON:0000473!9.24e-48!14;UBERON:0000991!4.59e-43!18;UBERON:0005564!4.59e-43!18;UBERON:0004176!4.91e-39!17;UBERON:0009196!4.91e-39!17;UBERON:0009117!4.91e-39!17;UBERON:0003133!5.05e-37!24;UBERON:0005156!5.09e-34!26;UBERON:0000990!5.09e-34!26;UBERON:0003886!1.27e-22!38;UBERON:0002553!5.48e-22!39;UBERON:0002323!5.82e-20!37;UBERON:0004458!5.82e-20!37;UBERON:0000464!2.32e-14!57;UBERON:0000466!9.72e-10!79;UBERON:0001301!5.52e-07!3;UBERON:0006555!5.52e-07!3;UBERON:0005103!5.52e-07!3;UBERON:0000083!5.52e-07!3;UBERON:0009201!5.52e-07!3;UBERON:0004819!5.52e-07!3;UBERON:0006553!5.52e-07!3;UBERON:0003074!5.52e-07!3;UBERON:0003060!5.52e-07!3|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.49e-37,14;UBERON:0003135,4.27e-35,15;UBERON:0003101,6.06e-33,16;UBERON:0000079,6.06e-33,16;UBERON:0004176,4.81e-31,17;UBERON:0009196,4.81e-31,17;UBERON:0009117,4.81e-31,17;UBERON:0000991,2.35e-29,18;UBERON:0005564,2.35e-29,18;UBERON:0003133,3.63e-22,24;UBERON:0005156,1.67e-20,26;UBERON:0000990,1.67e-20,26;UBERON:0002323,1.48e-14,37;UBERON:0004458,1.48e-14,37;UBERON:0003886,3.47e-14,38;UBERON:0002553,7.80e-14,39|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0.23517741427141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0.505445516867349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12738587736838,0.149516546043979,0.496375471371293,0.777804753376191,0.516639293910924,1.85851738039856,1.5256441023948,4.81756223922615,5.03324853243412,2.65742532908607,0.576060012515731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0.249810577937946,0,0,0,0,0|short_description=p3@Sspn}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=16651 | |||
|HGNC= | |||
|MCL_coexpression_id=77 | |||
|TSSclassifier=NA | |||
|UniProt=E9Q8Y7 | |||
|association_with_transcript=148bp_to_ENSMUST00000111701_5end | |||
|cluster_id=chr6:145902097..145902104,+ | |||
|description=CAGE_peak_3_at_Sspn_5end | |||
|id=chr6:145902097..145902104,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003135!3.30e-52!15;UBERON:0003101!7.85e-49!16;UBERON:0000079!7.85e-49!16;UBERON:0000473!9.24e-48!14;UBERON:0000991!4.59e-43!18;UBERON:0005564!4.59e-43!18;UBERON:0004176!4.91e-39!17;UBERON:0009196!4.91e-39!17;UBERON:0009117!4.91e-39!17;UBERON:0003133!5.05e-37!24;UBERON:0005156!5.09e-34!26;UBERON:0000990!5.09e-34!26;UBERON:0003886!1.27e-22!38;UBERON:0002553!5.48e-22!39;UBERON:0002323!5.82e-20!37;UBERON:0004458!5.82e-20!37;UBERON:0000464!2.32e-14!57;UBERON:0000466!9.72e-10!79;UBERON:0001301!5.52e-07!3;UBERON:0006555!5.52e-07!3;UBERON:0005103!5.52e-07!3;UBERON:0000083!5.52e-07!3;UBERON:0009201!5.52e-07!3;UBERON:0004819!5.52e-07!3;UBERON:0006553!5.52e-07!3;UBERON:0003074!5.52e-07!3;UBERON:0003060!5.52e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.49e-37,14;UBERON:0003135,4.27e-35,15;UBERON:0003101,6.06e-33,16;UBERON:0000079,6.06e-33,16;UBERON:0004176,4.81e-31,17;UBERON:0009196,4.81e-31,17;UBERON:0009117,4.81e-31,17;UBERON:0000991,2.35e-29,18;UBERON:0005564,2.35e-29,18;UBERON:0003133,3.63e-22,24;UBERON:0005156,1.67e-20,26;UBERON:0000990,1.67e-20,26;UBERON:0002323,1.48e-14,37;UBERON:0004458,1.48e-14,37;UBERON:0003886,3.47e-14,38;UBERON:0002553,7.80e-14,39 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0.23517741427141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0.505445516867349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12738587736838,0.149516546043979,0.496375471371293,0.777804753376191,0.516639293910924,1.85851738039856,1.5256441023948,4.81756223922615,5.03324853243412,2.65742532908607,0.576060012515731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0.249810577937946,0,0,0,0,0 | |||
|short_description=p3@Sspn | |||
}} |
Latest revision as of 22:21, 26 September 2015
Short description: | p3@Sspn |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Sspn_5end |
Coexpression cluster: | MCL_coexpression_mm9:77 |
Association with transcript: | 148bp_to_ENSMUST00000111701_5end |
EntrezGene: | Sspn |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
testis | 1.49e-37 | 14 |
male reproductive organ | 4.27e-35 | 15 |
male organism | 6.06e-33 | 16 |
male reproductive system | 6.06e-33 | 16 |
external genitalia | 4.81e-31 | 17 |
indifferent external genitalia | 4.81e-31 | 17 |
indifferent gonad | 4.81e-31 | 17 |
gonad | 2.35e-29 | 18 |
gonad primordium | 2.35e-29 | 18 |
reproductive organ | 3.63e-22 | 24 |
reproductive structure | 1.67e-20 | 26 |
reproductive system | 1.67e-20 | 26 |
body cavity | 1.48e-14 | 37 |
body cavity or lining | 1.48e-14 | 37 |
body cavity precursor | 3.47e-14 | 38 |
anatomical cavity | 7.80e-14 | 39 |