FFCP PHASE1:Mm9::chr1:191746217..191746236,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=226830 | |EntrezGene=226830 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=19 | |||
|TSSclassifier=NA | |||
|UniProt=Q8R5A0 | |UniProt=Q8R5A0 | ||
|association_with_transcript=5bp_to_ENSMUST00000027897_5end | |association_with_transcript=5bp_to_ENSMUST00000027897_5end | ||
|cluster_id=chr1:191746217..191746236,- | |||
|description=CAGE_peak_3_at_Smyd2_5end | |description=CAGE_peak_3_at_Smyd2_5end | ||
|id=chr1:191746217..191746236,- | |id=chr1:191746217..191746236,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!3.38e-12!23;UBERON:0001009!3.38e-12!23;UBERON:0007100!2.32e-11!18;UBERON:0000948!2.32e-11!18;UBERON:0005498!2.32e-11!18;UBERON:0004140!2.32e-11!18;UBERON:0009881!2.32e-11!18;UBERON:0004141!2.32e-11!18;UBERON:0003084!2.32e-11!18;UBERON:0007005!2.32e-11!18;UBERON:0004139!2.32e-11!18;UBERON:0004291!2.32e-11!18;UBERON:0004872!3.63e-09!33;UBERON:0003914!3.97e-07!47 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004535,3.17e-16,23;UBERON:0001009,3.17e-16,23;UBERON:0007100,6.87e-16,18;UBERON:0000948,6.87e-16,18;UBERON:0005498,6.87e-16,18;UBERON:0004140,6.87e-16,18;UBERON:0009881,6.87e-16,18;UBERON:0004141,6.87e-16,18;UBERON:0003084,6.87e-16,18;UBERON:0007005,6.87e-16,18;UBERON:0004139,6.87e-16,18;UBERON:0004291,6.87e-16,18;UBERON:0004872,2.88e-13,33;UBERON:0003914,1.69e-07,47 | |||
|phase1_expression=0.960893082628764,0,0,0,0.500895729946347,0.503637815735669,0.467225281191051,0.387369970324729,0.703943610758334,1.87251621057595,1.36974374580404,1.43589886191606,0,0.0874204024189974,0,0.607425802169478,0,0,0.137114433605739,0.42438965179803,0.680346321208558,1.39007331681239,0,0.47997726838022,0,0,0,0.861884930743556,0.570070258369122,0.504060259519861,0.221730510655305,0.635030673459631,2.46025915033828,0,1.73310971850765,1.49611180822643,1.22501613757421,0,0,0,0,0,0,4.02869817521847,2.83855407414641,4.58866880404204,0.782391344348039,0.436050312760893,1.31811709640683,0.58328969722285,0.979904951377538,0,0,0,0,2.31533492432352,0.573066879877513,2.06268836910977,0.404632921719196,0,0,2.37191172448392,3.55717918444456,0.449949858640699,0,0.7104801149461,0.299600110518405,0.384218305321555,0.103689612308478,0,0.210324961351382,0.571301968807607,0.883474163806454,0.244981598429908,0.0958454710182364,0,0,0.255374676170375,0.921639199537461,0.923204014111357,0.731901148819277,0.52091337055676,0.837548997004143,0.56276261003168,0.763991238884051,0.294628585473668,0.142371680799103,0.372798891650601,3.7863096666592,1.66257432234928,0.579728977403356,1.72084775396277,4.0798280022465,0.539703191637817,0.649776417447669,0.448026887097336,2.24711072210803,2.21559419351475,1.03914401841148,2.47337702157238,1.12674735821344,1.28326477414318,2.54805239706646,0,0.216491041011214,0.760079596425296,0.505524445014783,1.1418387971906,0.258937883647172,0.593768556259299,1.38788261412909,0,0.461230994512117,0.904335843315735,0.705532242814229,0.502666365318702,0.247194967734374,0.722996784599558,0,4.36770494858005,2.20841518460394,0.969750506270444,0,0.292780797011547,0,0.510914110417183,1.1981512450592,0.599902730993408,0.508280908292259,0.748953197024114,0,0.376963056338593,0,1.27857728665165,0.41557608911912,0.324482526135515,1.32391173005411,1.49288364732112,0.505445516867349,0.210441855886474,0.650602214813519,0.919608417733892,0.360124259610698,0.90422890701429,0.816437989815934,0.512454881139399,0.0937017245597288,0.258703370739016,1.07783996466421,1.13463648100692,0.351902248327898,2.19195732427575,0.834141747676794,0.696504333044333,0.205782136407943,0.59710280045548,0,0.257347907114715,1.42081749697796,3.10688658803253,3.28336483973535,5.22179978236943,4.49814997611899,7.87056926989615,8.4846912088058,11.39416329277,7.77992864058896,8.99093136227205,7.07607354627966,5.58169377868924,5.91802309684747,4.9707995724613,5.04965265169416,4.02619256281115,0,0,0,1.05780226665418,1.06644125267617,1.62565670302307,0.644337306610467,0.80673409849337,0.667134131534611,0.380451252225118,1.42358718463353,0.329397909448022,0.251335208800269,1.1937388322469,1.16978452271472,0.898819408654221,0.432276099749388,0.796565093017469,1.13800740571849,0.685491075658373,2.25415471346161,0.814605311381257,0.193952487167626,0.49095073923223,0.442655759869801,0.590440591918409,0.470996183524124,0.370191491765402,0.889357881261447,0.333690211432188,0.982794975566015,0.449724224769707,0,0.72353147925725,0,1.15078454980324,0.648540907100142,0.274561413188081,0,0.372140947668503,0.936113019343682,0.505157755894224,0.896987067609561,0.964887042726734,0.369506380333209,0.37898282354097,0.488894929326078,1.01847051465113,0.704070744865506,0.502518772325447,0.476087281772027,0,0.472905432318573,0.221464689648775,0.797273843287435,0.655453258862952,0.172684981865896,0.144649058581512,1.50791283939272,0,0,1.65562047782839,0.481651769963376,1.17211686592203,2.13115428989678,13.6334300690361,1.57754109708128,0,0.215423397732799,0.716906393857656,0.445597348164788,1.41538265394416,1.21443210502468,1.75353514746787,0,1.60660658210904,0.99358059645788,0.890328018336276,0.977321756121456,1.31976098378028,1.32745138339963,1.45668381692989,0.906970670894253,0.943025398779491,1.18120757152309,0.614870295887855,0.258428293168221,1.45413491791002,0.712994756769443,0.632073515871632,2.10837217149998,3.09406629744561,0,0.36012218806262,0.776152102696527,0.857348140126369,0.177340233642274,0.535106452806212,0.822745103010605,0,2.81606049676452,1.27099242518292,0.661585194164886,1.31909002353184,1.29171541356724,1.20625849856312,1.3130957840345,2.1338316966858,0.874442509889552,0.927126510052548,0.170870880797853,0,0.925972636848558,0.376736914009382,0.136694227721025,0.228778173206523,0.339956859987711,0.559805809294632,1.10559979043539,0.954670618015114,0.949007980743406,0.813277868507395,0.756037385752609,0.836353184057875,0.436725127492355,0.404593039154462,0.330613822901344,1.04702376793612,0.648074866458964,1.24267862617385,0.56369293868419,1.34564891439581,0.992750942742586,1.16670713006429,1.16243841129958,1.01373675294467,1.29092962510329,1.43224823328345,1.67774951081137,0.724752362478018,0.864090018773596,0.948033361884535,0.608175645870493,1.1298205288131,0.649604114888975,0.716106782669926,0.39736270956253,0.480781798079875,0.590758108698309,0.201932899896295,0.304827226619999,0.302478555410522,0.779663045918019,0.288635524920988,0.233753804363138,0.453460767230423,1.10992976687032,2.24284641523689,0.839423081820392,0.19318959403219,1.12609485270709,0.183151624267265,1.50057865355346,0,0,0,0.572895513439397,0,0,0,0,0,0,0,1.14166082342594,0.798049746802062,0.512200817262403,0.486213434136588,0.628839487883947,1.2869045591501,0.666740183404846,0.618105171716683,1.28367683836726,1.01078884705519,1.01391719956096,1.32038438970253,0.655490552289177,0.89635213366817,1.20614484806788,1.42888107384922,0.579421629724277,1.73618298417335,0,0.588795680537589,0.685738504770831,0.532427418478012,0.953744759789284,0.290692833264657,0.941093804153306,1.01537529470012,0.914639864363863,0.789209134313529,0.679020569229309,1.12228454331548,0.593175090620871,1.57607171800902,0.409231043169689,0.464810523557898,0.964533054905707,0.749431733813838,0.935726433781634,0.644613162144895,3.44318997723918,2.42650561031467,1.85494268496337 | |phase1_expression=0.960893082628764,0,0,0,0.500895729946347,0.503637815735669,0.467225281191051,0.387369970324729,0.703943610758334,1.87251621057595,1.36974374580404,1.43589886191606,0,0.0874204024189974,0,0.607425802169478,0,0,0.137114433605739,0.42438965179803,0.680346321208558,1.39007331681239,0,0.47997726838022,0,0,0,0.861884930743556,0.570070258369122,0.504060259519861,0.221730510655305,0.635030673459631,2.46025915033828,0,1.73310971850765,1.49611180822643,1.22501613757421,0,0,0,0,0,0,4.02869817521847,2.83855407414641,4.58866880404204,0.782391344348039,0.436050312760893,1.31811709640683,0.58328969722285,0.979904951377538,0,0,0,0,2.31533492432352,0.573066879877513,2.06268836910977,0.404632921719196,0,0,2.37191172448392,3.55717918444456,0.449949858640699,0,0.7104801149461,0.299600110518405,0.384218305321555,0.103689612308478,0,0.210324961351382,0.571301968807607,0.883474163806454,0.244981598429908,0.0958454710182364,0,0,0.255374676170375,0.921639199537461,0.923204014111357,0.731901148819277,0.52091337055676,0.837548997004143,0.56276261003168,0.763991238884051,0.294628585473668,0.142371680799103,0.372798891650601,3.7863096666592,1.66257432234928,0.579728977403356,1.72084775396277,4.0798280022465,0.539703191637817,0.649776417447669,0.448026887097336,2.24711072210803,2.21559419351475,1.03914401841148,2.47337702157238,1.12674735821344,1.28326477414318,2.54805239706646,0,0.216491041011214,0.760079596425296,0.505524445014783,1.1418387971906,0.258937883647172,0.593768556259299,1.38788261412909,0,0.461230994512117,0.904335843315735,0.705532242814229,0.502666365318702,0.247194967734374,0.722996784599558,0,4.36770494858005,2.20841518460394,0.969750506270444,0,0.292780797011547,0,0.510914110417183,1.1981512450592,0.599902730993408,0.508280908292259,0.748953197024114,0,0.376963056338593,0,1.27857728665165,0.41557608911912,0.324482526135515,1.32391173005411,1.49288364732112,0.505445516867349,0.210441855886474,0.650602214813519,0.919608417733892,0.360124259610698,0.90422890701429,0.816437989815934,0.512454881139399,0.0937017245597288,0.258703370739016,1.07783996466421,1.13463648100692,0.351902248327898,2.19195732427575,0.834141747676794,0.696504333044333,0.205782136407943,0.59710280045548,0,0.257347907114715,1.42081749697796,3.10688658803253,3.28336483973535,5.22179978236943,4.49814997611899,7.87056926989615,8.4846912088058,11.39416329277,7.77992864058896,8.99093136227205,7.07607354627966,5.58169377868924,5.91802309684747,4.9707995724613,5.04965265169416,4.02619256281115,0,0,0,1.05780226665418,1.06644125267617,1.62565670302307,0.644337306610467,0.80673409849337,0.667134131534611,0.380451252225118,1.42358718463353,0.329397909448022,0.251335208800269,1.1937388322469,1.16978452271472,0.898819408654221,0.432276099749388,0.796565093017469,1.13800740571849,0.685491075658373,2.25415471346161,0.814605311381257,0.193952487167626,0.49095073923223,0.442655759869801,0.590440591918409,0.470996183524124,0.370191491765402,0.889357881261447,0.333690211432188,0.982794975566015,0.449724224769707,0,0.72353147925725,0,1.15078454980324,0.648540907100142,0.274561413188081,0,0.372140947668503,0.936113019343682,0.505157755894224,0.896987067609561,0.964887042726734,0.369506380333209,0.37898282354097,0.488894929326078,1.01847051465113,0.704070744865506,0.502518772325447,0.476087281772027,0,0.472905432318573,0.221464689648775,0.797273843287435,0.655453258862952,0.172684981865896,0.144649058581512,1.50791283939272,0,0,1.65562047782839,0.481651769963376,1.17211686592203,2.13115428989678,13.6334300690361,1.57754109708128,0,0.215423397732799,0.716906393857656,0.445597348164788,1.41538265394416,1.21443210502468,1.75353514746787,0,1.60660658210904,0.99358059645788,0.890328018336276,0.977321756121456,1.31976098378028,1.32745138339963,1.45668381692989,0.906970670894253,0.943025398779491,1.18120757152309,0.614870295887855,0.258428293168221,1.45413491791002,0.712994756769443,0.632073515871632,2.10837217149998,3.09406629744561,0,0.36012218806262,0.776152102696527,0.857348140126369,0.177340233642274,0.535106452806212,0.822745103010605,0,2.81606049676452,1.27099242518292,0.661585194164886,1.31909002353184,1.29171541356724,1.20625849856312,1.3130957840345,2.1338316966858,0.874442509889552,0.927126510052548,0.170870880797853,0,0.925972636848558,0.376736914009382,0.136694227721025,0.228778173206523,0.339956859987711,0.559805809294632,1.10559979043539,0.954670618015114,0.949007980743406,0.813277868507395,0.756037385752609,0.836353184057875,0.436725127492355,0.404593039154462,0.330613822901344,1.04702376793612,0.648074866458964,1.24267862617385,0.56369293868419,1.34564891439581,0.992750942742586,1.16670713006429,1.16243841129958,1.01373675294467,1.29092962510329,1.43224823328345,1.67774951081137,0.724752362478018,0.864090018773596,0.948033361884535,0.608175645870493,1.1298205288131,0.649604114888975,0.716106782669926,0.39736270956253,0.480781798079875,0.590758108698309,0.201932899896295,0.304827226619999,0.302478555410522,0.779663045918019,0.288635524920988,0.233753804363138,0.453460767230423,1.10992976687032,2.24284641523689,0.839423081820392,0.19318959403219,1.12609485270709,0.183151624267265,1.50057865355346,0,0,0,0.572895513439397,0,0,0,0,0,0,0,1.14166082342594,0.798049746802062,0.512200817262403,0.486213434136588,0.628839487883947,1.2869045591501,0.666740183404846,0.618105171716683,1.28367683836726,1.01078884705519,1.01391719956096,1.32038438970253,0.655490552289177,0.89635213366817,1.20614484806788,1.42888107384922,0.579421629724277,1.73618298417335,0,0.588795680537589,0.685738504770831,0.532427418478012,0.953744759789284,0.290692833264657,0.941093804153306,1.01537529470012,0.914639864363863,0.789209134313529,0.679020569229309,1.12228454331548,0.593175090620871,1.57607171800902,0.409231043169689,0.464810523557898,0.964533054905707,0.749431733813838,0.935726433781634,0.644613162144895,3.44318997723918,2.42650561031467,1.85494268496337 | ||
|short_description=p3@Smyd2 | |short_description=p3@Smyd2 | ||
}} | }} |
Latest revision as of 23:45, 26 September 2015
Short description: | p3@Smyd2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Smyd2_5end |
Coexpression cluster: | MCL_coexpression_mm9:19 |
Association with transcript: | 5bp_to_ENSMUST00000027897_5end |
EntrezGene: | Smyd2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiovascular system | 3.17e-16 | 23 |
circulatory system | 3.17e-16 | 23 |
primary circulatory organ | 6.87e-16 | 18 |
heart | 6.87e-16 | 18 |
primitive heart tube | 6.87e-16 | 18 |
primary heart field | 6.87e-16 | 18 |
anterior lateral plate mesoderm | 6.87e-16 | 18 |
heart tube | 6.87e-16 | 18 |
heart primordium | 6.87e-16 | 18 |
cardiac mesoderm | 6.87e-16 | 18 |
cardiogenic plate | 6.87e-16 | 18 |
heart rudiment | 6.87e-16 | 18 |
splanchnic layer of lateral plate mesoderm | 2.88e-13 | 33 |
epithelial tube | 1.69e-07 | 47 |