FFCP PHASE1:Mm9::chr11:115971525..115971573,-: Difference between revisions
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{{FFCP|EntrezGene=217333|HGNC=|MCL_coexpression_id=2638|UniProt=Q8C0E3,A2A861,B7ZN75,Q497Z1|association_with_transcript=0bp_to_ENSMUST00000021120,ENSMUST00000106441,NM_001205081,NM_172570_5end|description=CAGE_peak_1_at_Trim47_5end|id=chr11:115971525..115971573,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004535!1.03e-12!23;UBERON:0001009!1.03e-12!23;UBERON:0007100!1.83e-10!18;UBERON:0000948!1.83e-10!18;UBERON:0005498!1.83e-10!18;UBERON:0004140!1.83e-10!18;UBERON:0009881!1.83e-10!18;UBERON:0004141!1.83e-10!18;UBERON:0003084!1.83e-10!18;UBERON:0007005!1.83e-10!18;UBERON:0004139!1.83e-10!18;UBERON:0004291!1.83e-10!18;UBERON:0004872!2.32e-10!33;UBERON:0000926!2.61e-09!193;UBERON:0004120!2.61e-09!193;UBERON:0006603!2.61e-09!193;UBERON:0002323!9.31e-07!37;UBERON:0004458!9.31e-07!37|ontology_enrichment_uberon_v019_2=UBERON:0004535,9.80e-13,23;UBERON:0001009,9.80e-13,23;UBERON:0007100,1.76e-10,18;UBERON:0000948,1.76e-10,18;UBERON:0005498,1.76e-10,18;UBERON:0004140,1.76e-10,18;UBERON:0009881,1.76e-10,18;UBERON:0004141,1.76e-10,18;UBERON:0003084,1.76e-10,18;UBERON:0007005,1.76e-10,18;UBERON:0004139,1.76e-10,18;UBERON:0004291,1.76e-10,18;UBERON:0004872,2.23e-10,33;UBERON:0000926,4.59e-07,120;UBERON:0004120,4.59e-07,120;UBERON:0006603,4.59e-07,120;UBERON:0002323,9.08e-07,37;UBERON:0004458,9.08e-07,37|phase1_expression=1.28119077683835,3.83872948403297,0.454999239389536,0,0,0.839396359559449,0.934450562382103,0,0,0,0,0,0.171200729931206,0,2.99798785634096,1.41732687172878,1.39912375625629,0.788655413395594,0,1.27316895539409,9.43980520676875,0.992909512008853,0,3.99981056983517,2.52350209173887,1.14846392823004,0.86152399231815,0.215471232685889,1.71021077510736,1.00812051903972,1.55211357458713,0,0.61506478758457,0,0,0,0,0,0,0,0,0,0,21.6542526917993,24.026332699025,15.0508336772579,39.119567217402,7.63088047331563,18.8930117151646,13.9989527333484,16.0984384869167,30.188038516644,0,0,0,72.5471609621371,98.5675033389323,58.270946427351,1.61853168687678,2.64495489636016,2.53532561402472,10.165335962074,7.11435836888911,61.1931807751351,69.2206453796882,75.3108921842866,27.5632101676932,24.5899715405795,1.97010263386108,0.810035629990144,2.52389953621658,5.42736870367227,3.75476519617743,1.22490799214954,0.670918297127655,2.75765635983006,5.50579404996943,3.70293280447044,1.99688493233117,2.90149833006426,2.8361169516747,3.64639359389732,3.07101298901519,2.8138130501584,4.27835093775068,4.12480019663135,4.41352210477219,2.23679334990361,7.19398836665249,5.51672388779534,47.2479116583735,16.3480536626463,4.75979933595425,4.31762553310254,1.94932925234301,1.34408066129201,8.56710962803686,33.0634825801432,41.0461887272533,46.2874842608546,0.563373679106722,12.8326477414318,15.2883143823987,14.2213340630666,1.29894624606728,2.53359865475099,2.52762222507392,6.2801133845483,6.73238497482646,10.5393918736026,11.9704875468634,17.9634632204163,14.7593918243877,10.7013074792362,12.9347577849275,8.79666139307728,43.2591193535154,17.930320258069,9.73071607144862,27.0150639412173,12.8088080707028,10.6672555689749,3.72783522436244,1.17112318804619,2.51336048176146,4.85368404896324,2.75574786363617,1.79970819298022,1.90605340609597,2.84602214869163,2.28750301409313,2.26177833803156,2.08589184230732,2.04572365864264,3.32460871295296,2.27137768294861,16.8034950353022,11.0722203842983,3.28539585963777,4.20883711772948,0.650602214813519,1.83921683546778,2.70093194708024,6.17889753126432,5.23881043465224,4.86832137082429,6.74652416830048,5.43277078551933,1.07783996466421,1.32374256117473,3.87092473160687,10.5213951565236,7.78532297831674,17.4126083261083,18.108828003899,13.1362616100206,0.702213187313235,1.28673953557358,0.568326998791185,17.8128164380532,15.0096678387902,25.2086886045421,22.2540051450098,28.9243420668684,29.4650185614892,25.113666033044,41.0458304141417,28.1404475104878,24.0257380873681,20.0284306176496,22.6181978632937,23.8305979503292,20.6377108373588,18.6546922076917,2.73376933133365,2.6755199218614,0.330418782983798,4.7601101999438,2.13288250535234,2.78684006232526,3.35055399437443,6.6555563125703,6.22658522765637,7.79925067061493,8.54152310780121,7.41145296258049,7.79139147280835,9.74886713001639,10.5280607044325,8.08937467788799,7.13255564586491,4.18196673834171,4.36236172192088,4.11294645395024,7.88954149711563,7.53509913027663,9.11576689687841,10.7307804432187,12.2046516649817,11.2183712464498,10.047918581848,8.14421281883883,8.30067355844017,2.16898637430922,2.75182593158484,3.37293168577281,3.65148218499305,3.37648023653384,7.63877555344259,10.64475708568,6.80967952455149,6.31491250332587,4.31304619582064,7.81495990103857,2.49630138491648,6.31447194867779,3.58794827043824,5.78932225636041,12.0089573608293,3.7898282354097,4.07412441105065,5.7713329163564,6.10194645550105,12.2279567932526,13.0924002487308,17.7571619550597,11.5073655197519,11.7376285513851,10.3645599627367,12.2897486036803,14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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=217333 | |||
|HGNC= | |||
|MCL_coexpression_id=2638 | |||
|TSSclassifier=NA | |||
|UniProt=Q8C0E3,A2A861,B7ZN75,Q497Z1 | |||
|association_with_transcript=0bp_to_ENSMUST00000021120,ENSMUST00000106441,NM_001205081,NM_172570_5end | |||
|cluster_id=chr11:115971525..115971573,- | |||
|description=CAGE_peak_1_at_Trim47_5end | |||
|id=chr11:115971525..115971573,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!1.03e-12!23;UBERON:0001009!1.03e-12!23;UBERON:0007100!1.83e-10!18;UBERON:0000948!1.83e-10!18;UBERON:0005498!1.83e-10!18;UBERON:0004140!1.83e-10!18;UBERON:0009881!1.83e-10!18;UBERON:0004141!1.83e-10!18;UBERON:0003084!1.83e-10!18;UBERON:0007005!1.83e-10!18;UBERON:0004139!1.83e-10!18;UBERON:0004291!1.83e-10!18;UBERON:0004872!2.32e-10!33;UBERON:0000926!2.61e-09!193;UBERON:0004120!2.61e-09!193;UBERON:0006603!2.61e-09!193;UBERON:0002323!9.31e-07!37;UBERON:0004458!9.31e-07!37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004535,9.80e-13,23;UBERON:0001009,9.80e-13,23;UBERON:0007100,1.76e-10,18;UBERON:0000948,1.76e-10,18;UBERON:0005498,1.76e-10,18;UBERON:0004140,1.76e-10,18;UBERON:0009881,1.76e-10,18;UBERON:0004141,1.76e-10,18;UBERON:0003084,1.76e-10,18;UBERON:0007005,1.76e-10,18;UBERON:0004139,1.76e-10,18;UBERON:0004291,1.76e-10,18;UBERON:0004872,2.23e-10,33;UBERON:0000926,4.59e-07,120;UBERON:0004120,4.59e-07,120;UBERON:0006603,4.59e-07,120;UBERON:0002323,9.08e-07,37;UBERON:0004458,9.08e-07,37 | |||
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| |||
|short_description=p1@Trim47 | |||
}} |
Latest revision as of 23:58, 26 September 2015
Short description: | p1@Trim47 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Trim47_5end |
Coexpression cluster: | MCL_coexpression_mm9:2638 |
Association with transcript: | 0bp_to_ENSMUST00000021120, ENSMUST00000106441, NM_001205081, NM_172570_5end |
EntrezGene: | Trim47 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiovascular system | 9.80e-13 | 23 |
circulatory system | 9.80e-13 | 23 |
primary circulatory organ | 1.76e-10 | 18 |
heart | 1.76e-10 | 18 |
primitive heart tube | 1.76e-10 | 18 |
primary heart field | 1.76e-10 | 18 |
anterior lateral plate mesoderm | 1.76e-10 | 18 |
heart tube | 1.76e-10 | 18 |
heart primordium | 1.76e-10 | 18 |
cardiac mesoderm | 1.76e-10 | 18 |
cardiogenic plate | 1.76e-10 | 18 |
heart rudiment | 1.76e-10 | 18 |
splanchnic layer of lateral plate mesoderm | 2.23e-10 | 33 |
mesoderm | 4.59e-07 | 120 |
mesoderm-derived structure | 4.59e-07 | 120 |
presumptive mesoderm | 4.59e-07 | 120 |
body cavity | 9.08e-07 | 37 |
body cavity or lining | 9.08e-07 | 37 |