Personal tools

FFCP PHASE1:Mm9::chr9:66440752..66440776,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=235441
|EntrezGene=235441
|HGNC=
|HGNC=
|MCL_coexpression_id=3721
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=0bp_to_ENSMUST00000034940_5end
|association_with_transcript=0bp_to_ENSMUST00000034940_5end
|cluster_id=chr9:66440752..66440776,-
|description=CAGE_peak_2_at_Usp3_5end
|description=CAGE_peak_2_at_Usp3_5end
|id=chr9:66440752..66440776,-
|id=chr9:66440752..66440776,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002370!2.31e-08!23;UBERON:0000974!2.31e-08!23;UBERON:0004807!2.31e-08!23;UBERON:0005058!2.31e-08!23;UBERON:0003351!2.31e-08!23;UBERON:0009113!2.31e-08!23;UBERON:0003295!2.31e-08!23;UBERON:0009722!2.31e-08!23;UBERON:0005562!2.31e-08!23;UBERON:0007690!2.31e-08!23;UBERON:0003408!2.75e-08!24;UBERON:0006562!2.78e-08!24;UBERON:0001557!2.78e-08!24;UBERON:0001042!2.78e-08!24;UBERON:0008814!2.78e-08!24;UBERON:0009145!2.78e-08!24
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.31e-08,23;UBERON:0000974,2.31e-08,23;UBERON:0004807,2.31e-08,23;UBERON:0005058,2.31e-08,23;UBERON:0003351,2.31e-08,23;UBERON:0009113,2.31e-08,23;UBERON:0003295,2.31e-08,23;UBERON:0009722,2.31e-08,23;UBERON:0005562,2.31e-08,23;UBERON:0007690,2.31e-08,23;UBERON:0003408,2.75e-08,24;UBERON:0006562,2.78e-08,24;UBERON:0001557,2.78e-08,24;UBERON:0001042,2.78e-08,24;UBERON:0008814,2.78e-08,24;UBERON:0009145,2.78e-08,24;UBERON:0007811,3.59e-08,36;UBERON:0000153,4.56e-08,43
|phase1_expression=5.44506080156299,6.97950815278722,8.64498554840118,12.40103266358,16.5295590882295,10.0727563147134,7.00837921786577,22.5965816022758,11.82625266074,14.0438715793196,5.30775701499065,5.18519033469687,17.6336751829142,14.9488888136486,1.66554880907831,2.42970320867791,4.19737126876888,11.5143690355757,8.77532375076728,9.76096199135469,4.93251082876205,11.1205865344992,9.40319240900167,4.7997726838022,7.34109699414944,2.8711598205751,6.46142994238612,10.3426191689227,6.27077284206034,8.82105454159758,7.09537634096975,6.98533740805594,3.07532393792285,15.8481681015439,8.95440021228951,6.64938581433969,7.75843553797003,12.5559489221072,13.2827008569046,8.37637990358077,11.7646297606203,13.6609096991689,7.2826552954673,2.01434908760924,2.23029248682932,1.83546752161682,0.782391344348039,1.52617609466313,2.41654801007919,1.55543919259427,2.09979632438044,0,8.38913030288682,24.6623128283857,24.1987535382574,3.08711323243136,4.01146815914259,1.54701627683233,7.08107613008592,4.7609188134483,6.97214543856797,1.0165335962074,1.77858959222228,0.899899717281399,0,1.4209602298922,0.898800331555214,1.92109152660777,12.3390638647088,10.6654691282036,9.25429829946081,3.14216082844184,3.75476519617743,7.96190194897201,7.85932862349538,14.7075005857603,0,0.638436690425939,1.38245879930619,8.04506355154182,4.7573574673253,5.2091337055676,1.67509799400829,0.56276261003168,0.916789486660861,1.17851434189467,3.13217697758026,6.15118171223492,2.65041676666144,1.96486056277642,19.1310562543107,3.44169550792555,15.6393406752783,3.2382191498269,2.59910566979068,2.68816132258401,2.52799956237153,1.02258193546835,1.03914401841148,1.7666978725517,6.19711047017394,3.84979432242953,2.54805239706646,14.2213340630666,4.5463118612355,3.54703811665138,4.54972000513305,5.36664234679582,8.54495016035667,3.71105347662062,5.89850111004862,5.48037860961854,4.61230994512117,4.97384713823654,5.99702406392095,3.89566433121994,5.43828929015623,2.60278842455841,2.65383165584962,2.75003644910596,5.30019644304944,4.84875253135222,5.59175283654366,14.3462590535658,23.0391377494801,6.13096932500619,14.6174451897223,10.1983464268879,12.1987417990142,1.04853447583376,0.915001205637253,2.76439574648302,1.73824320192276,1.02286182932132,0.83115217823824,1.78465389374533,6.41587992256993,5.59831367745419,4.29628689337247,7.99679052368601,8.19758790665033,5.51765050640335,6.66229880279792,6.78171680260718,9.45707338203457,11.0177799444971,9.37017245597288,4.9153640440413,15.089759505299,12.1027891307404,8.09375171154165,5.04150184583422,4.72680323683516,6.268538997399,4.7329891373827,6.17006227137329,6.31991868581911,9.26452465612975,11.6507034752193,10.3562886267751,6.80125573945179,6.84235833551856,6.15536312521547,4.72234156193769,6.17068451549513,5.34828072925938,4.02410102099429,9.92505410120941,6.25327429671226,6.07419617092652,4.29664690593035,5.26319954731196,3.07370161407471,4.56301823785264,1.05144974282064,6.48299057989492,12.8863325363681,6.87571473325215,11.3042772783674,9.0572302025571,9.40732467651281,9.4791256572971,6.67134131534611,7.03834816616469,7.59246498471219,9.22314146454461,7.79139147280835,10.9426059622633,7.79856348476481,4.49409704327111,6.70027954611552,10.9527700289902,7.77638393907635,7.31190480702264,9.01661885384643,8.5533557695032,6.98228953803453,12.554311760367,8.97958827164453,5.90440591918409,5.65195420228949,6.66344685177723,3.85388415213294,2.50267658574141,2.94838492669805,2.69834534861824,2.23146133527353,5.30589751455317,3.8193877767213,3.16465751195892,6.97181475132652,4.3929826110093,7.18841032636773,7.07067800570156,5.30464044294753,3.78868316920668,5.56131981917928,11.5786445127208,3.14080423283228,5.87423376488503,6.19266910479698,5.7713329163564,7.97946844180907,7.03526281255626,9.99783291721258,9.36641509717434,7.72412206120336,4.87222317227305,7.33491935824441,3.4411296090305,4.66249451037918,7.95569822198314,3.01582567878545,2.17562273527484,2.45882136509518,5.24279817978992,1.28440471990234,1.17211686592203,2.95082901678016,5.55436039849621,11.6738041184015,14.4462335389756,10.3403230911743,10.7535959078648,9.13474563737816,14.1538265394416,12.1443210502468,7.3063964477828,10.2774822266096,3.53453448063988,18.8780313326997,2.67098405500883,6.35259141478947,5.77395430403874,3.98235415019888,8.74010290157933,3.62788268357701,5.09233715340925,3.83892460745005,7.99331384654211,8.26970538138308,5.81653967164009,9.62542921638748,5.68866164284469,1.05418608574999,5.15677716240934,3.06395645178409,7.38250485528372,3.49268446213437,7.07312215604255,6.0295679438373,6.24290861607247,5.92376474167636,6.39376393140658,4.22409074514679,2.1183207086382,3.30792597082443,7.09010887648364,12.5942252822806,8.26287071515735,9.78853220825719,10.1767357841938,7.28702091574627,0.556275906031529,3.07567585436135,5.98521917093345,4.25947412950337,2.44878994106098,3.14396723758358,3.66045077130436,16.487907709404,19.7331547776358,16.8603968041397,6.68269432610579,8.69923982348122,8.3360981522008,6.48032044930808,7.52717865652087,7.86105229486239,9.03591120778299,10.4143354213923,6.28214260761671,11.276502676386,6.83473244395618,8.45539408026285,8.22341003241883,6.12196414691261,4.86127970860119,5.42471258606471,6.08242051766801,7.74557775061976,10.6767595572039,13.9462928086195,6.52277126230216,5.18454011264158,23.068811805857,6.48720688928525,8.11416561602135,13.1220031207573,18.7978030450856,22.6496744450642,29.2074942333524,28.3563892175188,27.8667401856887,36.3506467744349,24.8032415436628,31.1865218367208,28.4787051255375,49.088298916259,6.80191150845634,8.21348027484039,7.08739467214858,4.02923079273788,5.60249822693352,4.69206188627955,8.05867146775966,6.21668299329291,3.51100472824754,0.564751842617067,0.460325236507177,1.14579102687879,0.859265911718438,0,1.5107877947794,0.675022500231806,0,1.81256963593682,1.03552062350364,11.9355449721803,10.7736715818278,8.02447947044431,5.83456120963906,5.24032906569956,5.1476182366004,6.66740183404846,4.12070114477788,6.09746498224449,6.06473308233114,2.28131369901216,6.03604292435444,3.7456602987953,4.9939618875798,4.7671439233159,3.81034953026459,5.44656331940821,6.75182271622968,3.29668720642645,5.5935589651071,3.77156177623957,4.79184676630211,5.7224685587357,4.65108533223451,4.23492211868988,5.66917872874233,4.57319932181931,4.99832451731901,5.70377278152619,2.80571135828869,4.74540072496697,4.43270170690036,5.32000356120596,4.80304207676495,5.78719832943424,4.49659040288303,5.6143586026898,8.16510005383534,7.07766828654721,4.41182838239031,4.40548887678801
|phase1_expression=5.44506080156299,6.97950815278722,8.64498554840118,12.40103266358,16.5295590882295,10.0727563147134,7.00837921786577,22.5965816022758,11.82625266074,14.0438715793196,5.30775701499065,5.18519033469687,17.6336751829142,14.9488888136486,1.66554880907831,2.42970320867791,4.19737126876888,11.5143690355757,8.77532375076728,9.76096199135469,4.93251082876205,11.1205865344992,9.40319240900167,4.7997726838022,7.34109699414944,2.8711598205751,6.46142994238612,10.3426191689227,6.27077284206034,8.82105454159758,7.09537634096975,6.98533740805594,3.07532393792285,15.8481681015439,8.95440021228951,6.64938581433969,7.75843553797003,12.5559489221072,13.2827008569046,8.37637990358077,11.7646297606203,13.6609096991689,7.2826552954673,2.01434908760924,2.23029248682932,1.83546752161682,0.782391344348039,1.52617609466313,2.41654801007919,1.55543919259427,2.09979632438044,0,8.38913030288682,24.6623128283857,24.1987535382574,3.08711323243136,4.01146815914259,1.54701627683233,7.08107613008592,4.7609188134483,6.97214543856797,1.0165335962074,1.77858959222228,0.899899717281399,0,1.4209602298922,0.898800331555214,1.92109152660777,12.3390638647088,10.6654691282036,9.25429829946081,3.14216082844184,3.75476519617743,7.96190194897201,7.85932862349538,14.7075005857603,0,0.638436690425939,1.38245879930619,8.04506355154182,4.7573574673253,5.2091337055676,1.67509799400829,0.56276261003168,0.916789486660861,1.17851434189467,3.13217697758026,6.15118171223492,2.65041676666144,1.96486056277642,19.1310562543107,3.44169550792555,15.6393406752783,3.2382191498269,2.59910566979068,2.68816132258401,2.52799956237153,1.02258193546835,1.03914401841148,1.7666978725517,6.19711047017394,3.84979432242953,2.54805239706646,14.2213340630666,4.5463118612355,3.54703811665138,4.54972000513305,5.36664234679582,8.54495016035667,3.71105347662062,5.89850111004862,5.48037860961854,4.61230994512117,4.97384713823654,5.99702406392095,3.89566433121994,5.43828929015623,2.60278842455841,2.65383165584962,2.75003644910596,5.30019644304944,4.84875253135222,5.59175283654366,14.3462590535658,23.0391377494801,6.13096932500619,14.6174451897223,10.1983464268879,12.1987417990142,1.04853447583376,0.915001205637253,2.76439574648302,1.73824320192276,1.02286182932132,0.83115217823824,1.78465389374533,6.41587992256993,5.59831367745419,4.29628689337247,7.99679052368601,8.19758790665033,5.51765050640335,6.66229880279792,6.78171680260718,9.45707338203457,11.0177799444971,9.37017245597288,4.9153640440413,15.089759505299,12.1027891307404,8.09375171154165,5.04150184583422,4.72680323683516,6.268538997399,4.7329891373827,6.17006227137329,6.31991868581911,9.26452465612975,11.6507034752193,10.3562886267751,6.80125573945179,6.84235833551856,6.15536312521547,4.72234156193769,6.17068451549513,5.34828072925938,4.02410102099429,9.92505410120941,6.25327429671226,6.07419617092652,4.29664690593035,5.26319954731196,3.07370161407471,4.56301823785264,1.05144974282064,6.48299057989492,12.8863325363681,6.87571473325215,11.3042772783674,9.0572302025571,9.40732467651281,9.4791256572971,6.67134131534611,7.03834816616469,7.59246498471219,9.22314146454461,7.79139147280835,10.9426059622633,7.79856348476481,4.49409704327111,6.70027954611552,10.9527700289902,7.77638393907635,7.31190480702264,9.01661885384643,8.5533557695032,6.98228953803453,12.554311760367,8.97958827164453,5.90440591918409,5.65195420228949,6.66344685177723,3.85388415213294,2.50267658574141,2.94838492669805,2.69834534861824,2.23146133527353,5.30589751455317,3.8193877767213,3.16465751195892,6.97181475132652,4.3929826110093,7.18841032636773,7.07067800570156,5.30464044294753,3.78868316920668,5.56131981917928,11.5786445127208,3.14080423283228,5.87423376488503,6.19266910479698,5.7713329163564,7.97946844180907,7.03526281255626,9.99783291721258,9.36641509717434,7.72412206120336,4.87222317227305,7.33491935824441,3.4411296090305,4.66249451037918,7.95569822198314,3.01582567878545,2.17562273527484,2.45882136509518,5.24279817978992,1.28440471990234,1.17211686592203,2.95082901678016,5.55436039849621,11.6738041184015,14.4462335389756,10.3403230911743,10.7535959078648,9.13474563737816,14.1538265394416,12.1443210502468,7.3063964477828,10.2774822266096,3.53453448063988,18.8780313326997,2.67098405500883,6.35259141478947,5.77395430403874,3.98235415019888,8.74010290157933,3.62788268357701,5.09233715340925,3.83892460745005,7.99331384654211,8.26970538138308,5.81653967164009,9.62542921638748,5.68866164284469,1.05418608574999,5.15677716240934,3.06395645178409,7.38250485528372,3.49268446213437,7.07312215604255,6.0295679438373,6.24290861607247,5.92376474167636,6.39376393140658,4.22409074514679,2.1183207086382,3.30792597082443,7.09010887648364,12.5942252822806,8.26287071515735,9.78853220825719,10.1767357841938,7.28702091574627,0.556275906031529,3.07567585436135,5.98521917093345,4.25947412950337,2.44878994106098,3.14396723758358,3.66045077130436,16.487907709404,19.7331547776358,16.8603968041397,6.68269432610579,8.69923982348122,8.3360981522008,6.48032044930808,7.52717865652087,7.86105229486239,9.03591120778299,10.4143354213923,6.28214260761671,11.276502676386,6.83473244395618,8.45539408026285,8.22341003241883,6.12196414691261,4.86127970860119,5.42471258606471,6.08242051766801,7.74557775061976,10.6767595572039,13.9462928086195,6.52277126230216,5.18454011264158,23.068811805857,6.48720688928525,8.11416561602135,13.1220031207573,18.7978030450856,22.6496744450642,29.2074942333524,28.3563892175188,27.8667401856887,36.3506467744349,24.8032415436628,31.1865218367208,28.4787051255375,49.088298916259,6.80191150845634,8.21348027484039,7.08739467214858,4.02923079273788,5.60249822693352,4.69206188627955,8.05867146775966,6.21668299329291,3.51100472824754,0.564751842617067,0.460325236507177,1.14579102687879,0.859265911718438,0,1.5107877947794,0.675022500231806,0,1.81256963593682,1.03552062350364,11.9355449721803,10.7736715818278,8.02447947044431,5.83456120963906,5.24032906569956,5.1476182366004,6.66740183404846,4.12070114477788,6.09746498224449,6.06473308233114,2.28131369901216,6.03604292435444,3.7456602987953,4.9939618875798,4.7671439233159,3.81034953026459,5.44656331940821,6.75182271622968,3.29668720642645,5.5935589651071,3.77156177623957,4.79184676630211,5.7224685587357,4.65108533223451,4.23492211868988,5.66917872874233,4.57319932181931,4.99832451731901,5.70377278152619,2.80571135828869,4.74540072496697,4.43270170690036,5.32000356120596,4.80304207676495,5.78719832943424,4.49659040288303,5.6143586026898,8.16510005383534,7.07766828654721,4.41182838239031,4.40548887678801
|short_description=p2@Usp3
|short_description=p2@Usp3
}}
}}

Latest revision as of 00:54, 27 September 2015

Short description:p2@Usp3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Usp3_5end
Coexpression cluster:MCL_coexpression_mm9:3721
Association with transcript: 0bp_to_ENSMUST00000034940_5end
EntrezGene:Usp3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Usp3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G75.45
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I56.98
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I68.64
CD326+ enterocyte, pool1.CNhs13542.11848-124I312.40
CD326+ enterocyte, pool2.CNhs13197.11849-124I416.53
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I710.07
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I87.01
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E922.60
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E711.83
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F214.04
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E65.31
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F15.19
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E417.63
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E814.95
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A32.43
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A54.20
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A211.51
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A48.78
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A69.76
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.93
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H211.12
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I99.40
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D14.80
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D27.34
GP2+ M cell, pool1.CNhs13228.11845-124H92.87
GP2+ M cell, pool2.CNhs13231.11846-124I16.46
GP2+ M cell, pool3.CNhs13240.11847-124I210.34
Ileum epithelium, pool1.CNhs13199.10252-104B96.27
Ileum epithelium, pool2.CNhs13232.10253-104C18.82
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C87.10
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I36.99
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G63.08
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F58.95
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F66.65
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F77.76
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G812.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H113.28
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H38.38
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G911.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H213.66
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H47.28
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.01
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.23
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.84
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.53
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.42
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.56
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.10
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A28.39
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I924.66
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A124.20
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C13.09
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E14.01
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C37.08
Mouse Granule cells, donor2.CNhs12357.11731-123E34.76
Mouse Granule cells, donor3.CNhs12108.11636-122C76.97
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E81.92
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D512.34
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F510.67
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D99.25
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.75
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D27.96
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F27.86
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D614.71
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.64
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.38
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D48.05
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.76
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D85.21
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.68
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.92
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.18
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.13
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E16.15
Mouse Schwann, donor1.CNhs12507.11728-123D92.65
Mouse Schwann, donor2.CNhs12573.11746-123F91.96
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G319.13
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F73.44
Mouse hepatocyte, donor1.CNhs13078.11714-123C415.64
Mouse hepatocyte, donor3.CNhs12615.11637-122C83.24
Mouse hepatocyte, donor6.CNhs13090.11822-124F42.60
Mouse hepatocyte, donor8.CNhs13091.11824-124F62.69
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.53
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.02
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.04
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.77
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G66.20
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H13.85
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G14.55
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G23.55
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G34.55
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B65.37
accessory axillary lymph node, adult.CNhs10475.1063-29H98.54
adrenal gland, adult.CNhs10508.49-24D73.71
adrenal gland, embryo E14.CNhs11038.406-44C55.90
adrenal gland, embryo E16.CNhs11004.1254-43D65.48
adrenal gland, embryo E17.CNhs11043.1263-45I14.61
adrenal gland, embryo E18.CNhs11026.1262-18F54.97
adrenal gland, neonate N00.CNhs11191.1311-23C16.00
adrenal gland, neonate N25.CNhs11223.1377-27I33.90
amnion, adult pregnant day17.5.CNhs10488.583-22A85.44
aorta, adult.CNhs10498.46-23H12.60
bone (os femoris), adult.CNhs10483.56-12G22.65
bone (os femoris), neonate N02.CNhs11227.1985-43F52.75
bone (os femoris), neonate N16.CNhs11225.1525-43A65.30
bone (os femoris), neonate N20.CNhs11195.1350-25C34.85
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B214.35
cerebellum, neonate N30.CNhs11135.1395-42I223.04
colon, adult.CNhs10468.36-18H76.13
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C714.62
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D110.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D412.20
corpora quadrigemina, adult.CNhs10501.16-22A41.05
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F12.76
cortex, adult.CNhs10473.12-14D51.74
cortex, neonate N30.CNhs11107.1392-42F21.02
diencephalon, adult.CNhs10482.20-12F20.83
diencephalon, neonate N30.CNhs11201.1388-42B21.78
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B16.42
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A25.60
epididymis, adult.CNhs10490.58-23B24.30
eyeball, adult.CNhs10484.31-12G48.00
eyeball, embryo E12.CNhs11016.345-16C68.20
eyeball, embryo E14.CNhs10521.399-16E25.52
eyeball, embryo E15.CNhs10593.426-16C96.66
eyeball, embryo E17.CNhs11023.1261-18D46.78
eyeball, neonate N00.CNhs11207.633-15C69.46
eyeball, neonate N01.CNhs11140.1532-43E711.02
eyeball, neonate N02.CNhs11205.1551-44G89.37
eyeball, neonate N16.CNhs11188.777-19A24.92
forelimb, embryo E11.CNhs10596.335-25E215.09
forelimb, embryo E12.CNhs10600.359-14H212.10
forelimb, embryo E13.CNhs10589.384-1E28.09
forelimb, embryo E14.CNhs10577.413-26A85.04
forelimb, embryo E15.CNhs11007.437-20E74.73
forelimb, embryo E17.CNhs10598.1517-43C46.27
forelimb, embryo E18.CNhs11008.1520-43B54.73
gonad, embryo E13.CNhs11044.1564-45I66.17
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C86.32
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D29.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D511.65
heart, embryo E11.CNhs10586.331-24E910.36
heart, embryo E12.CNhs11015.353-12F56.80
heart, embryo E13.CNhs11013.376-3I96.84
heart, embryo E14.CNhs10597.403-26D46.16
heart, embryo E15.CNhs11017.431-16C84.72
heart, embryo E16.CNhs11021.457-17C66.17
heart, embryo E17.CNhs11025.479-18E55.35
heart, embryo E18.CNhs11030.1283-20G34.02
heart, neonate N00.CNhs11213.639-21E39.93
heart, neonate N03.CNhs11221.1349-25I26.25
heart, neonate N10.CNhs11118.749-24G16.07
heart, neonate N16.CNhs11209.782-15G14.30
heart, neonate N20.CNhs11127.821-26I65.26
heart, neonate N25.CNhs11196.1351-25D33.07
heart, neonate N30.CNhs11202.1390-42D24.56
hippocampus, adult.CNhs10478.13-16E81.05
hippocampus, neonate N00.CNhs11228.627-43G16.48
intestinal mucosa, adult.CNhs10506.860-29I312.89
intestine, adult.CNhs10496.178-9A36.88
intestine, embryo E12.CNhs11019.1251-16I511.30
intestine, embryo E13.CNhs11010.381-16D59.06
intestine, embryo E15.CNhs10602.976-16D89.41
intestine, embryo E16.CNhs10585.463-22H49.48
intestine, embryo E17.CNhs10582.482-18D36.67
intestine, embryo E18.CNhs10526.1289-20F77.04
intestine, neonate N00.CNhs11126.644-26D17.59
intestine, neonate N01.CNhs11192.1322-23E99.22
intestine, neonate N06.CNhs11102.688-20B87.79
intestine, neonate N07.CNhs11095.720-20F210.94
intestine, neonate N10.CNhs11098.755-23A57.80
intestine, neonate N20.CNhs11187.827-18D14.49
intestine, neonate N25.CNhs11121.1352-25E36.70
intestine, neonate N30.CNhs11131.1384-42G110.95
kidney, embryo E14.CNhs10606.411-4I97.78
kidney, embryo E15.CNhs10997.434-16F87.31
kidney, embryo E16.CNhs10584.464-22A59.02
kidney, embryo E17.CNhs11028.483-18I28.55
kidney, embryo E18.CNhs11001.1288-20C76.98
kidney, neonate N00.CNhs11214.646-21G712.55
kidney, neonate N10.CNhs11206.758-6D58.98
kidney, neonate N20.CNhs11113.832-19I15.90
kidney, neonate N25.CNhs11122.1353-25F35.65
kidney, neonate N30.CNhs11203.1385-42H16.66
liver, adult pregnant day01.CNhs10466.508-5B23.85
liver, embryo E12.CNhs10601.355-15F82.50
liver, embryo E13.CNhs10524.378-3H62.95
liver, embryo E14.CNhs10594.409-16E12.70
liver, embryo E15.CNhs10520.433-16D72.23
liver, embryo E16.CNhs10523.462-17F55.31
liver, embryo E17.CNhs10510.481-18A33.82
liver, embryo E18.CNhs10579.499-43G43.16
liver, neonate N00.CNhs11117.641-24F46.97
liver, neonate N03.CNhs11123.1345-25G24.39
liver, neonate N06.CNhs11101.684-20A87.19
liver, neonate N07.CNhs11103.716-20H27.07
liver, neonate N10.CNhs11115.751-24B95.30
liver, neonate N20.CNhs11220.823-25A33.79
liver, neonate N25.CNhs11198.1368-26H15.56
liver, neonate N30.CNhs11106.1382-42D111.58
lung, adult.CNhs10474.28-22B13.14
lung, embryo E12.CNhs10522.354-16G25.87
lung, embryo E14.CNhs10604.404-26F86.19
lung, embryo E15.CNhs11020.432-17C55.77
lung, embryo E16.CNhs10998.458-17B67.98
lung, embryo E17.CNhs10605.480-44A67.04
lung, embryo E18.CNhs10583.1287-20I610.00
lung, neonate N00.CNhs11224.640-42C69.37
lung, neonate N06.CNhs11212.683-20E57.72
lung, neonate N07.CNhs11111.715-19A34.87
lung, neonate N10.CNhs11219.750-23E67.33
lung, neonate N20.CNhs11109.822-18A43.44
lung, neonate N25.CNhs11119.1359-25C74.66
lung, neonate N30.CNhs11133.1394-42H27.96
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.18
mammary gland, adult lactating day02.CNhs10480.595-22B62.46
mammary gland, adult pregnant day19.CNhs10476.588-5H25.24
medulla oblongata, adult.CNhs10477.17-12C21.28
medulla oblongata, neonate N30.CNhs11200.1396-42A31.17
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C72.95
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C25.55
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E111.67
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E214.45
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E310.34
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D710.75
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D89.13
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D914.15
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D412.14
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D57.31
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D610.28
olfactory brain, adult.CNhs10489.18-22I93.53
ovary, adult.CNhs10507.91-2I718.88
ovary, embryo E18.CNhs11040.505-44H72.67
ovary, neonate N00.CNhs11217.1299-22I46.35
oviduct, adult pregnant day01.CNhs10500.988-6G65.77
pancreas, adult.CNhs10486.34-16E43.98
pancreas, embryo E14.CNhs11012.405-44F48.74
pancreas, embryo E15.CNhs11042.1556-45F23.63
pancreas, embryo E16.CNhs11003.460-26E55.09
pancreas, embryo E17.CNhs10599.1558-45G33.84
pancreas, embryo E18.CNhs10580.1535-43I77.99
pancreas, neonate N00.CNhs11105.645-26G98.27
pancreas, neonate N01.CNhs11138.1531-43D75.82
pancreas, neonate N02.CNhs11139.1539-43D89.63
pancreas, neonate N16.CNhs11136.787-43B65.69
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H55.16
pituitary gland, adult.CNhs10493.21-1G83.06
pituitary gland, embryo E12.CNhs11018.346-16E67.38
pituitary gland, embryo E13.CNhs11009.370-44C73.49
pituitary gland, embryo E14.CNhs11037.398-44A57.07
pituitary gland, embryo E15.CNhs10592.427-16B96.03
pituitary gland, embryo E16.CNhs11036.449-43F66.24
pituitary gland, embryo E17.CNhs11039.1265-44F55.92
pituitary gland, neonate N00.CNhs11190.1308-22E96.39
placenta, adult pregnant day10.CNhs10472.539-13I74.22
placenta, adult pregnant day17.CNhs10464.577-18G32.12
prostate, adult.CNhs10470.859-1F83.31
skin, adult.CNhs10492.30-1C37.09
skin, neonate N00.CNhs11124.650-25G412.59
skin, neonate N03.CNhs11215.662-22H38.26
skin, neonate N06.CNhs11097.693-20I59.79
skin, neonate N10.CNhs11108.762-6C410.18
small intestine, neonate N16.CNhs11114.790-21I17.29
spinal cord, adult.CNhs10505.24-13C90.56
spleen, adult.CNhs10465.25-2G23.08
spleen, embryo E16.CNhs11035.461-43C15.99
spleen, embryo E18.CNhs11011.1271-21F24.26
spleen, neonate N10.CNhs11116.752-24D12.45
spleen, neonate N20.CNhs11112.824-19H13.14
spleen, neonate N25.CNhs11099.1354-25G33.66
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C616.49
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C919.73
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D316.86
stomach, adult.CNhs10503.33-1H66.68
stomach, embryo E12.CNhs10588.356-43E38.70
stomach, embryo E15.CNhs10603.1252-16G88.34
stomach, embryo E16.CNhs11022.459-17D46.48
stomach, embryo E17.CNhs11006.1035-18D57.53
stomach, embryo E18.CNhs10999.1286-20C67.86
stomach, neonate N03.CNhs11193.1340-24B89.04
stomach, neonate N07.CNhs11210.718-18A910.41
stomach, neonate N25.CNhs11104.1355-25E46.28
stomach, neonate N30.CNhs11134.1386-42I111.28
submandibular gland, adult.CNhs10469.59-29C16.83
testis, adult.CNhs10504.57-7G58.46
testis, embryo E13.CNhs11031.389-23F58.22
testis, embryo E15.CNhs11034.443-27C56.12
testis, embryo E16.CNhs11033.470-26G54.86
testis, embryo E17.CNhs11029.486-18I55.42
testis, embryo E18.CNhs11027.503-18G56.08
testis, neonate N00.CNhs11189.1300-22B77.75
testis, neonate N07.CNhs11222.726-26I410.68
testis, neonate N10.CNhs11204.763-44D913.95
testis, neonate N20.CNhs11110.839-18H36.52
testis, neonate N30.CNhs11130.1391-42E25.18
thymus, adult.CNhs10471.38-12B523.07
thymus, embryo E14.CNhs11041.402-44I46.49
thymus, embryo E15.CNhs11005.430-45I28.11
thymus, embryo E16.CNhs11002.456-26C513.12
thymus, embryo E17.CNhs10581.478-18C118.80
thymus, embryo E18.CNhs10595.1273-19G422.65
thymus, neonate N02.CNhs11181.1541-43F829.21
thymus, neonate N03.CNhs11137.2104-43C728.36
thymus, neonate N06.CNhs11197.681-26C427.87
thymus, neonate N07.CNhs11211.713-19D336.35
thymus, neonate N10.CNhs11194.748-24E424.80
thymus, neonate N20.CNhs11186.820-7A231.19
thymus, neonate N25.CNhs11125.1362-25G728.48
thymus, neonate N30.CNhs11132.1393-42G249.09
tongue, adult.CNhs10499.32-1B46.80
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H38.21
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F77.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G54.03
urinary bladder, adult.CNhs10481.879-12E45.60
uterus, adult pregnant day19.CNhs10497.590-15F54.69
uterus, adult.CNhs10509.92-27E58.06
vagina, adult.CNhs10502.89-27D56.22
vesicular gland, adult.CNhs10491.51-27F83.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.86
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.81
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I811.94
whole body, embryo E12.CNhs10587.857-27C910.77
whole body, embryo E13.CNhs10512.372-23H28.02
whole body, embryo E14.5.CNhs10578.420-27D25.83
whole body, embryo E14.CNhs10519.395-14B15.24
whole body, embryo E16.CNhs10514.453-14F25.15
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G56.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G56.10
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G56.06
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.28
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G56.04
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.75
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.99
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.77
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.81
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G55.45
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G56.75
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G55.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.77
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.79
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G54.65
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.23
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G55.67
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.57
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G55.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.70
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.81
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.75
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.43
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G55.32
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.80
whole body, embryo E17.5.CNhs10513.490-9F95.79
whole body, embryo E17.CNhs10517.475-3I54.50
whole body, embryo E18.CNhs10516.493-3B35.61
whole body, neonate N00.CNhs10525.657-19C28.17
whole body, neonate N01.CNhs10576.659-23C67.08
whole body, neonate N06.CNhs10515.692-21D14.41
whole body, neonate N10.CNhs10518.761-6B44.41





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr9:66440752..66440776,-&oldid=4283762"