FFCP PHASE1:Mm9::chr1:39535525..39535578,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=54610 | |EntrezGene=54610 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2305 | |||
|TSSclassifier=NA | |||
|UniProt=Q9Z1A9 | |UniProt=Q9Z1A9 | ||
|association_with_transcript=13bp_to_ENSMUST00000054462,NM_018775,uc007atg.2,uc007ath.2_5end | |association_with_transcript=13bp_to_ENSMUST00000054462,NM_018775,uc007atg.2,uc007ath.2_5end | ||
|cluster_id=chr1:39535525..39535578,- | |||
|description=CAGE_peak_1_at_Tbc1d8_5end | |description=CAGE_peak_1_at_Tbc1d8_5end | ||
|id=chr1:39535525..39535578,- | |id=chr1:39535525..39535578,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000466!2.14e-12!79;UBERON:0000464!3.47e-10!57;UBERON:0002553!8.89e-10!39;UBERON:0003886!3.17e-09!38;UBERON:0002323!1.13e-08!37;UBERON:0004458!1.13e-08!37;UBERON:0002075!5.31e-07!19 | |ontology_enrichment_uberon=UBERON:0000466!2.14e-12!79;UBERON:0000464!3.47e-10!57;UBERON:0002553!8.89e-10!39;UBERON:0003886!3.17e-09!38;UBERON:0002323!1.13e-08!37;UBERON:0004458!1.13e-08!37;UBERON:0002075!5.31e-07!19 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002553,8.75e-10,39;UBERON:0003886,3.13e-09,38;UBERON:0002323,1.11e-08,37;UBERON:0004458,1.11e-08,37;UBERON:0002075,5.25e-07,19 | |||
|phase1_expression=2.24208385946712,2.09385244583617,2.72999543633722,3.62957053568196,4.50806156951712,5.37213670118047,4.43864017131499,0.258246646883153,1.267098499365,1.87251621057595,0,0,0.684802919724823,0.437102012094987,5.3297561890506,6.07425802169478,4.89693314689703,5.99378114180652,6.30726394586398,6.79023442876848,6.80346321208558,4.0709289992363,3.91799683708403,1.91990907352088,4.12936705920906,1.72269589234506,1.7230479846363,1.50829862880122,1.52018735565099,3.02436155711917,2.88249663851896,0,0.61506478758457,0,3.17736781726402,2.32728503501889,2.04169356262369,138.533969773916,86.7282232421419,87.4284652436243,124.116843974544,135.926051506731,150.508209439658,0.503587271902309,1.01376931219515,0.183546752161682,2.34717403304412,0.218025156380447,0.219686182734472,0.972149495371417,0.55994568650145,0,0.167782606057736,0,0.672187598284928,0.514518872071894,0.85960031981627,0.515672092277442,2.63011399117477,3.1739458756322,2.53532561402472,1.0165335962074,2.66788438833342,8.09909745553259,8.89979726310277,9.2362414942993,4.19440154725767,3.45796474789399,3.52544681848824,1.75507719831198,2.94454945891935,2.57085885963423,2.20868540951614,0.734944795289724,1.24599112323707,1.83843757322004,0,1.0214987046815,2.4577045320999,2.1101806036831,1.37231465403614,1.56274011167028,3.07101298901519,2.25105044012672,2.59757021220577,4.71405736757868,2.70506193518296,2.42319279572891,0.530083353332288,0.604572480854284,12.7540375028738,6.88339101585109,1.3599426674155,5.93673510801599,5.84798775702902,13.4408066129201,5.61777680527007,0,0,0,3.09855523508697,1.28326477414318,0,0,0.216491041011214,1.26679932737549,0.505524445014783,8.67797485864856,22.5275958773039,3.41416919849097,2.25530924795977,2.43572382649713,3.68984795609694,2.71300752994721,6.11461277105665,2.01066546127481,3.70792451601561,1.59059292611903,31.8459798701955,9.05894359705491,8.83366073841574,5.81850303762267,5.59175283654366,11.1256702864388,5.65506108396329,4.59822699375465,1.43778149407104,0.599902730993408,1.90605340609597,2.54644086988199,24.2475319493872,3.01570445070875,3.30266208365325,6.13717097592793,4.36354893575076,10.3834408363365,3.25885964321012,26.9963126223902,82.387619249378,20.412860020988,1.17108398666433,1.83921683546778,1.98068342785884,4.21973489940002,7.00775941258677,6.79002717509704,10.3071897015702,29.7508876349868,1.72454394346274,2.45837904218165,2.99116911078713,3.28793598641362,2.50242524303038,4.179025998266,3.08673204611915,2.38841120182192,0,2.57347907114715,5.39910648851626,3.93538967817454,3.28336483973535,3.96136535214233,2.84093682702252,7.28027657465394,3.85667782218446,3.48800917125612,4.29237442239391,4.32031766758527,4.77223564749093,2.29834449710733,3.72916523910936,3.21639972335731,3.95190207523891,4.56301823785264,1.68231958851302,1.9551876352064,4.29544417878937,4.23120906661671,2.77274725695804,2.32236671860439,2.83508414908605,5.44545516483025,6.0042071838115,5.70676878337677,6.64340686162316,4.11747386810027,6.28338022000674,5.37182474511107,7.01870713628832,7.19055526923377,5.40345124686736,7.36822711041159,2.65535061334314,3.42745537829186,3.38123207019241,3.46207257337034,3.49114476901726,5.26018649177389,1.83385957660346,1.18088118383682,1.09899109488962,0.987177311374404,10.0793893209631,1.66845105716094,3.34150291692445,2.69834534861824,5.68008339887808,7.95884627182976,12.9859184408524,20.7141218964584,49.6133793931608,6.04035109013779,2.87536413054709,6.32639611036456,5.30464044294753,5.30415643688935,2.33216637578486,12.5435315554475,10.3461786493299,1.51593129416388,2.28150967018836,2.8856664581782,6.10194645550105,12.3954630506944,7.37935286746643,31.02625000939,8.98520321405289,10.1873757238436,11.1618338060241,11.4704320301017,12.4333186943445,17.9364832641074,3.01582567878545,3.26343410291226,89.0093334164456,93.818493743609,2.56880943980467,2.57865710502847,0.163934945376675,7.82659874333556,3.47059041357882,3.90438744296638,4.09304455692318,4.77937595905104,4.67877215573028,5.37845408498782,8.50102473517278,3.79932615284705,5.53402889125133,5.14114106274891,8.65834519770439,4.27357448801413,4.39794790254655,11.2179683621324,15.9294166007955,5.58395463156457,5.13950046840077,6.22396763194464,5.90603785761546,5.53383266299069,10.3371317267288,9.08834323693764,8.55593708123331,11.6933600436252,20.0295356292498,16.5016869197099,11.234506989875,0.540183282093931,2.06973894052407,3.64372959553707,3.54680467284547,6.0645397984704,9.3792941743209,14.6143175575008,4.22409074514679,3.81297727554876,5.51320995137405,5.44124634706884,5.65125493435669,3.79971427047382,3.46179797609096,4.76008609260678,4.95517422270746,3.15223013417866,8.88528580148834,4.95328483111734,6.48180845793991,7.15800136617826,10.2520670790769,11.6676868335327,3.56954702987096,3.07893195112048,4.69879910935041,5.72802370809068,2.21435195506795,5.48962561242491,4.96824567780286,5.22720740036172,5.02233896616208,5.93403124093211,7.76942483818158,8.11443420150492,5.31421390496351,35.4163408459548,3.38215763210514,4.48549638131936,5.79104716599842,7.00024278038572,5.8121920564979,6.75824501963113,8.21500670520278,7.81226309063701,5.66240459898839,9.90494895386625,9.79302021276743,5.05617793005085,3.64905387522296,5.13554785824136,3.50786222040047,4.833720783022,3.9736270956253,4.20684073319891,4.13530676088816,3.63479219813331,4.19137436602499,4.2346997757473,6.62713589030316,3.2712026157712,4.9088298916259,7.02864189207155,1.99787358036658,2.9605572681127,2.18250001273302,20.8644761554766,5.2551093126331,6.59345847362154,6.85978813053011,13.0408747049194,5.0827665835536,1.84130094602871,2.29158205375759,2.749650917499,2.05524755931193,5.2877572817279,2.70009000092722,2.70192721934532,1.35942722695261,1.55328093525546,1.03787347584177,3.59122386060928,3.58540572083682,4.132814190161,2.51535795153579,4.59608771125035,4.88942801163553,4.73880631649457,7.38114182061175,4.80124702351215,6.33698249725599,6.60192194851267,4.40115085108447,4.41773551593598,5.16919220600519,2.85776214769844,6.60540657885676,6.36600427530227,4.94503080963968,4.56316652416632,3.77156177623957,4.79184676630211,4.76872379894642,5.37781741539616,5.74067220533517,6.68455402344244,5.3049112133104,4.99832451731901,4.48153575691344,6.73370725989286,6.4062909787054,6.59980031916275,6.13846564754534,5.57772628269478,6.94463799532109,2.74791635731741,8.65546951248011,10.09893954027,5.54736162999646,5.51478547798789,3.01428186306548 | |phase1_expression=2.24208385946712,2.09385244583617,2.72999543633722,3.62957053568196,4.50806156951712,5.37213670118047,4.43864017131499,0.258246646883153,1.267098499365,1.87251621057595,0,0,0.684802919724823,0.437102012094987,5.3297561890506,6.07425802169478,4.89693314689703,5.99378114180652,6.30726394586398,6.79023442876848,6.80346321208558,4.0709289992363,3.91799683708403,1.91990907352088,4.12936705920906,1.72269589234506,1.7230479846363,1.50829862880122,1.52018735565099,3.02436155711917,2.88249663851896,0,0.61506478758457,0,3.17736781726402,2.32728503501889,2.04169356262369,138.533969773916,86.7282232421419,87.4284652436243,124.116843974544,135.926051506731,150.508209439658,0.503587271902309,1.01376931219515,0.183546752161682,2.34717403304412,0.218025156380447,0.219686182734472,0.972149495371417,0.55994568650145,0,0.167782606057736,0,0.672187598284928,0.514518872071894,0.85960031981627,0.515672092277442,2.63011399117477,3.1739458756322,2.53532561402472,1.0165335962074,2.66788438833342,8.09909745553259,8.89979726310277,9.2362414942993,4.19440154725767,3.45796474789399,3.52544681848824,1.75507719831198,2.94454945891935,2.57085885963423,2.20868540951614,0.734944795289724,1.24599112323707,1.83843757322004,0,1.0214987046815,2.4577045320999,2.1101806036831,1.37231465403614,1.56274011167028,3.07101298901519,2.25105044012672,2.59757021220577,4.71405736757868,2.70506193518296,2.42319279572891,0.530083353332288,0.604572480854284,12.7540375028738,6.88339101585109,1.3599426674155,5.93673510801599,5.84798775702902,13.4408066129201,5.61777680527007,0,0,0,3.09855523508697,1.28326477414318,0,0,0.216491041011214,1.26679932737549,0.505524445014783,8.67797485864856,22.5275958773039,3.41416919849097,2.25530924795977,2.43572382649713,3.68984795609694,2.71300752994721,6.11461277105665,2.01066546127481,3.70792451601561,1.59059292611903,31.8459798701955,9.05894359705491,8.83366073841574,5.81850303762267,5.59175283654366,11.1256702864388,5.65506108396329,4.59822699375465,1.43778149407104,0.599902730993408,1.90605340609597,2.54644086988199,24.2475319493872,3.01570445070875,3.30266208365325,6.13717097592793,4.36354893575076,10.3834408363365,3.25885964321012,26.9963126223902,82.387619249378,20.412860020988,1.17108398666433,1.83921683546778,1.98068342785884,4.21973489940002,7.00775941258677,6.79002717509704,10.3071897015702,29.7508876349868,1.72454394346274,2.45837904218165,2.99116911078713,3.28793598641362,2.50242524303038,4.179025998266,3.08673204611915,2.38841120182192,0,2.57347907114715,5.39910648851626,3.93538967817454,3.28336483973535,3.96136535214233,2.84093682702252,7.28027657465394,3.85667782218446,3.48800917125612,4.29237442239391,4.32031766758527,4.77223564749093,2.29834449710733,3.72916523910936,3.21639972335731,3.95190207523891,4.56301823785264,1.68231958851302,1.9551876352064,4.29544417878937,4.23120906661671,2.77274725695804,2.32236671860439,2.83508414908605,5.44545516483025,6.0042071838115,5.70676878337677,6.64340686162316,4.11747386810027,6.28338022000674,5.37182474511107,7.01870713628832,7.19055526923377,5.40345124686736,7.36822711041159,2.65535061334314,3.42745537829186,3.38123207019241,3.46207257337034,3.49114476901726,5.26018649177389,1.83385957660346,1.18088118383682,1.09899109488962,0.987177311374404,10.0793893209631,1.66845105716094,3.34150291692445,2.69834534861824,5.68008339887808,7.95884627182976,12.9859184408524,20.7141218964584,49.6133793931608,6.04035109013779,2.87536413054709,6.32639611036456,5.30464044294753,5.30415643688935,2.33216637578486,12.5435315554475,10.3461786493299,1.51593129416388,2.28150967018836,2.8856664581782,6.10194645550105,12.3954630506944,7.37935286746643,31.02625000939,8.98520321405289,10.1873757238436,11.1618338060241,11.4704320301017,12.4333186943445,17.9364832641074,3.01582567878545,3.26343410291226,89.0093334164456,93.818493743609,2.56880943980467,2.57865710502847,0.163934945376675,7.82659874333556,3.47059041357882,3.90438744296638,4.09304455692318,4.77937595905104,4.67877215573028,5.37845408498782,8.50102473517278,3.79932615284705,5.53402889125133,5.14114106274891,8.65834519770439,4.27357448801413,4.39794790254655,11.2179683621324,15.9294166007955,5.58395463156457,5.13950046840077,6.22396763194464,5.90603785761546,5.53383266299069,10.3371317267288,9.08834323693764,8.55593708123331,11.6933600436252,20.0295356292498,16.5016869197099,11.234506989875,0.540183282093931,2.06973894052407,3.64372959553707,3.54680467284547,6.0645397984704,9.3792941743209,14.6143175575008,4.22409074514679,3.81297727554876,5.51320995137405,5.44124634706884,5.65125493435669,3.79971427047382,3.46179797609096,4.76008609260678,4.95517422270746,3.15223013417866,8.88528580148834,4.95328483111734,6.48180845793991,7.15800136617826,10.2520670790769,11.6676868335327,3.56954702987096,3.07893195112048,4.69879910935041,5.72802370809068,2.21435195506795,5.48962561242491,4.96824567780286,5.22720740036172,5.02233896616208,5.93403124093211,7.76942483818158,8.11443420150492,5.31421390496351,35.4163408459548,3.38215763210514,4.48549638131936,5.79104716599842,7.00024278038572,5.8121920564979,6.75824501963113,8.21500670520278,7.81226309063701,5.66240459898839,9.90494895386625,9.79302021276743,5.05617793005085,3.64905387522296,5.13554785824136,3.50786222040047,4.833720783022,3.9736270956253,4.20684073319891,4.13530676088816,3.63479219813331,4.19137436602499,4.2346997757473,6.62713589030316,3.2712026157712,4.9088298916259,7.02864189207155,1.99787358036658,2.9605572681127,2.18250001273302,20.8644761554766,5.2551093126331,6.59345847362154,6.85978813053011,13.0408747049194,5.0827665835536,1.84130094602871,2.29158205375759,2.749650917499,2.05524755931193,5.2877572817279,2.70009000092722,2.70192721934532,1.35942722695261,1.55328093525546,1.03787347584177,3.59122386060928,3.58540572083682,4.132814190161,2.51535795153579,4.59608771125035,4.88942801163553,4.73880631649457,7.38114182061175,4.80124702351215,6.33698249725599,6.60192194851267,4.40115085108447,4.41773551593598,5.16919220600519,2.85776214769844,6.60540657885676,6.36600427530227,4.94503080963968,4.56316652416632,3.77156177623957,4.79184676630211,4.76872379894642,5.37781741539616,5.74067220533517,6.68455402344244,5.3049112133104,4.99832451731901,4.48153575691344,6.73370725989286,6.4062909787054,6.59980031916275,6.13846564754534,5.57772628269478,6.94463799532109,2.74791635731741,8.65546951248011,10.09893954027,5.54736162999646,5.51478547798789,3.01428186306548 | ||
|short_description=p1@Tbc1d8 | |short_description=p1@Tbc1d8 | ||
}} | }} |
Latest revision as of 03:04, 27 September 2015
Short description: | p1@Tbc1d8 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Tbc1d8_5end |
Coexpression cluster: | MCL_coexpression_mm9:2305 |
Association with transcript: | 13bp_to_ENSMUST00000054462, NM_018775, uc007atg.2, uc007ath.2_5end |
EntrezGene: | Tbc1d8 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
anatomical cavity | 8.75e-10 | 39 |
body cavity precursor | 3.13e-09 | 38 |
body cavity | 1.11e-08 | 37 |
body cavity or lining | 1.11e-08 | 37 |
viscus | 5.25e-07 | 19 |