FFCP PHASE1:Mm9::chr1:40738453..40738489,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=226999 | |EntrezGene=226999 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=Q3ZAS0,Q3TM63 | |UniProt=Q3ZAS0,Q3TM63 | ||
|association_with_transcript=-67bp_to_ENSMUST00000027231,NM_001033289,uc007aum.1,uc007aun.1_5end | |association_with_transcript=-67bp_to_ENSMUST00000027231,NM_001033289,uc007aum.1,uc007aun.1_5end | ||
|cluster_id=chr1:40738453..40738489,+ | |||
|description=CAGE_peak_2_at_Slc9a2_5end | |description=CAGE_peak_2_at_Slc9a2_5end | ||
|id=chr1:40738453..40738489,+ | |id=chr1:40738453..40738489,+ | ||
|ontology_enrichment_celltype=CL:0002563!5.03e-07!9;CL:0002251!5.03e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,9.46e-11,9;CL:0002251,9.46e-11,9;CL:0000239,1.11e-10,6;CL:0000677,1.11e-10,6;CL:0000584,1.11e-10,6;CL:0000075,5.35e-09,7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.47e-11!15;UBERON:0001242!4.55e-10!13;UBERON:0000060!4.55e-10!13;UBERON:0001262!4.55e-10!13;UBERON:0004786!4.55e-10!13;UBERON:0005409!8.69e-08!59;UBERON:0007023!2.22e-07!51;UBERON:0000485!4.77e-07!11;UBERON:0000160!4.94e-07!43;UBERON:0003350!5.03e-07!9;UBERON:0004808!5.03e-07!9;UBERON:0001277!5.03e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.89e-23,31;UBERON:0005409,6.04e-23,47;UBERON:0000344,7.05e-20,15;UBERON:0001242,7.42e-17,13;UBERON:0001262,7.42e-17,13;UBERON:0004786,7.42e-17,13;UBERON:0004923,2.15e-12,24;UBERON:0003350,9.46e-11,9;UBERON:0004808,9.46e-11,9;UBERON:0001277,9.46e-11,9;UBERON:0000485,1.75e-08,11;UBERON:0002108,1.74e-07,4;UBERON:0004119,7.45e-07,118;UBERON:0000925,7.45e-07,118;UBERON:0006595,7.45e-07,118 | |||
|phase1_expression=0.320297694209588,56.1850406299371,50.5049155722385,60.1903780500592,77.6388381416838,6.04365378882803,4.43864017131499,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,20.6390225403495,35.5584385654114,52.2551087344668,26.7072437618626,23.270893130076,44.4654801527915,30.7476758307116,19.7340154483221,0,0,0,0.577703239502549,1.32987716286794,1.02084678131185,0,0,0,0,0,0,0,0,0,1.56478268869608,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0.338844532069132,1.77858959222228,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,1.10115880999389,0.383062014255563,0.153606533256243,0,0,0,0.558365998002762,0.56276261003168,2.29197371665215,0,0,0,0,0,0,0,0,0,0,0,1.82577746171277,0,0,0,0.422530259330042,0,0,0,0.865964164044856,0.506719730950197,0.505524445014783,4.68153906848146,0,0,0,0,0,0,0,0,0.494389935468748,0.289198713839823,0,0.485300549842228,1.54589062922275,0.484875253135222,29.8226817948995,1.17112318804619,0,22.9911349687732,0.11981512450592,0,0,0.898743836428936,0,0.125654352112864,0.347648640384553,1.79000820131231,0.41557608911912,0,0,0.746441823660558,1.51633655060205,0.210441855886474,0,0,0,0,0,0,0.0937017245597288,0.517406741478031,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292399974850665,0.219550115291051,0,1.26173969138476,0,58.4841245881322,7.93351699990633,0,0,0,0,0.22237804384487,0.380451252225118,21.8283368310475,0.329397909448022,3.77002813200404,1.59165177632921,2.14460495831032,13.4822911298133,28.962498683209,28.0789195288658,0,0.228497025219458,1.1270773567308,0.203651327845314,0.387904974335251,0.350679099451593,1.58091342810643,2.80459281161244,2.19798218977925,1.60416313098341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0.159454768657487,0.163863314715738,0,0,0,0,0,0.275936746304732,0.481651769963376,0.937693492737625,0,3.28212205365685,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0.680879211507576,0,0,0,0.177340233642274,0,0.164549020602121,0.608929898229199,0,1.0591603543191,6.83638033970382,1.81374878235628,0.161464426695906,0.904693873922338,1.79058516004705,2.1338316966858,11.659233465194,0.18542530201051,0,0,0,0,0,0,0,0,0.276399947608848,8.59203556213602,0,0.406638934253697,0.540026704109006,0.418176592028937,2.40198820120795,2.15782954215713,3.63675205191478,7.85267825952089,67.0109411918569,0.621339313086926,0,0.149516546043979,0,0,0,0,0,0,0,0.241584120826006,0.576060012515731,0.316011120628178,0.202725215290164,0.102710957164827,0.129920822977795,0.179026695667481,0.198681354781265,0.120195449519969,0,0.100966449948148,0.0762068066549998,0.100826185136841,0.584747284438515,0.192423683280659,0.350630706544707,0.906921534460845,0,0,0,0.965947970160952,0.187682475451182,0,0,10.5330141847426,0.564751842617067,0.460325236507177,0.572895513439397,0.171853182343688,1.37016503954128,0,0,1.35096360967266,0.453142408984205,1.03552062350364,0,0,0,0,0,0,0.222246727801615,0.618105171716683,0.320919209591815,1.01078884705519,0.760437899670719,0.377252682772152,0.187283014939765,0.640251524048693,0.402048282689293,0.476293691283074,0.695305955669133,0.192909220463705,0.824171801606613,0.294397840268795,0.342869252385415,0.354951612318675,0,0.436039249896986,0.470546902076653,0.338458431566706,0.914639864363863,0.526139422875686,0.271608227691724,0.561142271657738,0.593175090620871,0.788035859004508,0.409231043169689,0.154936841185966,0.385813221962283,0,0.701794825336225,0.214871054048298,0.191288332068843,0.441182838239031,0.463735671240843 | |phase1_expression=0.320297694209588,56.1850406299371,50.5049155722385,60.1903780500592,77.6388381416838,6.04365378882803,4.43864017131499,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,20.6390225403495,35.5584385654114,52.2551087344668,26.7072437618626,23.270893130076,44.4654801527915,30.7476758307116,19.7340154483221,0,0,0,0.577703239502549,1.32987716286794,1.02084678131185,0,0,0,0,0,0,0,0,0,1.56478268869608,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0.338844532069132,1.77858959222228,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,1.10115880999389,0.383062014255563,0.153606533256243,0,0,0,0.558365998002762,0.56276261003168,2.29197371665215,0,0,0,0,0,0,0,0,0,0,0,1.82577746171277,0,0,0,0.422530259330042,0,0,0,0.865964164044856,0.506719730950197,0.505524445014783,4.68153906848146,0,0,0,0,0,0,0,0,0.494389935468748,0.289198713839823,0,0.485300549842228,1.54589062922275,0.484875253135222,29.8226817948995,1.17112318804619,0,22.9911349687732,0.11981512450592,0,0,0.898743836428936,0,0.125654352112864,0.347648640384553,1.79000820131231,0.41557608911912,0,0,0.746441823660558,1.51633655060205,0.210441855886474,0,0,0,0,0,0,0.0937017245597288,0.517406741478031,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292399974850665,0.219550115291051,0,1.26173969138476,0,58.4841245881322,7.93351699990633,0,0,0,0,0.22237804384487,0.380451252225118,21.8283368310475,0.329397909448022,3.77002813200404,1.59165177632921,2.14460495831032,13.4822911298133,28.962498683209,28.0789195288658,0,0.228497025219458,1.1270773567308,0.203651327845314,0.387904974335251,0.350679099451593,1.58091342810643,2.80459281161244,2.19798218977925,1.60416313098341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0.159454768657487,0.163863314715738,0,0,0,0,0,0.275936746304732,0.481651769963376,0.937693492737625,0,3.28212205365685,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0.680879211507576,0,0,0,0.177340233642274,0,0.164549020602121,0.608929898229199,0,1.0591603543191,6.83638033970382,1.81374878235628,0.161464426695906,0.904693873922338,1.79058516004705,2.1338316966858,11.659233465194,0.18542530201051,0,0,0,0,0,0,0,0,0.276399947608848,8.59203556213602,0,0.406638934253697,0.540026704109006,0.418176592028937,2.40198820120795,2.15782954215713,3.63675205191478,7.85267825952089,67.0109411918569,0.621339313086926,0,0.149516546043979,0,0,0,0,0,0,0,0.241584120826006,0.576060012515731,0.316011120628178,0.202725215290164,0.102710957164827,0.129920822977795,0.179026695667481,0.198681354781265,0.120195449519969,0,0.100966449948148,0.0762068066549998,0.100826185136841,0.584747284438515,0.192423683280659,0.350630706544707,0.906921534460845,0,0,0,0.965947970160952,0.187682475451182,0,0,10.5330141847426,0.564751842617067,0.460325236507177,0.572895513439397,0.171853182343688,1.37016503954128,0,0,1.35096360967266,0.453142408984205,1.03552062350364,0,0,0,0,0,0,0.222246727801615,0.618105171716683,0.320919209591815,1.01078884705519,0.760437899670719,0.377252682772152,0.187283014939765,0.640251524048693,0.402048282689293,0.476293691283074,0.695305955669133,0.192909220463705,0.824171801606613,0.294397840268795,0.342869252385415,0.354951612318675,0,0.436039249896986,0.470546902076653,0.338458431566706,0.914639864363863,0.526139422875686,0.271608227691724,0.561142271657738,0.593175090620871,0.788035859004508,0.409231043169689,0.154936841185966,0.385813221962283,0,0.701794825336225,0.214871054048298,0.191288332068843,0.441182838239031,0.463735671240843 | ||
|short_description=p2@Slc9a2 | |short_description=p2@Slc9a2 | ||
}} | }} |
Latest revision as of 03:40, 27 September 2015
Short description: | p2@Slc9a2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Slc9a2_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | -67bp_to_ENSMUST00000027231, NM_001033289, uc007aum.1, uc007aun.1_5end |
EntrezGene: | Slc9a2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 9.46e-11 | 9 |
epithelial cell of alimentary canal | 9.46e-11 | 9 |
brush border epithelial cell | 1.11e-10 | 6 |
gut absorptive cell | 1.11e-10 | 6 |
enterocyte | 1.11e-10 | 6 |
columnar/cuboidal epithelial cell | 5.35e-09 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.89e-23 | 31 |
gastrointestinal system | 6.04e-23 | 47 |
mucosa | 7.05e-20 | 15 |
intestinal mucosa | 7.42e-17 | 13 |
wall of intestine | 7.42e-17 | 13 |
gastrointestinal system mucosa | 7.42e-17 | 13 |
organ component layer | 2.15e-12 | 24 |
epithelium of mucosa | 9.46e-11 | 9 |
gastrointestinal system epithelium | 9.46e-11 | 9 |
intestinal epithelium | 9.46e-11 | 9 |
simple columnar epithelium | 1.75e-08 | 11 |
small intestine | 1.74e-07 | 4 |
endoderm-derived structure | 7.45e-07 | 118 |
endoderm | 7.45e-07 | 118 |
presumptive endoderm | 7.45e-07 | 118 |