FFCP PHASE1:Mm9::chr7:88259685..88259694,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=434203 | |EntrezGene=434203 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=74 | |||
|TSSclassifier=NA | |||
|UniProt=E9PXX9,Q6P8I9 | |UniProt=E9PXX9,Q6P8I9 | ||
|association_with_transcript=0bp_to_ENSMUST00000026820,NM_001004184,uc009ibs.1_5end | |association_with_transcript=0bp_to_ENSMUST00000026820,NM_001004184,uc009ibs.1_5end | ||
|cluster_id=chr7:88259685..88259694,+ | |||
|description=CAGE_peak_2_at_Slc28a1_5end | |description=CAGE_peak_2_at_Slc28a1_5end | ||
|id=chr7:88259685..88259694,+ | |id=chr7:88259685..88259694,+ | ||
|ontology_enrichment_celltype=CL:0000239!1.36e-09!6;CL:0000677!1.36e-09!6;CL:0000212!1.36e-09!6;CL:0000584!1.36e-09!6;CL:0000075!3.84e-08!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.71e-17,6;CL:0000677,1.71e-17,6;CL:0000584,1.71e-17,6;CL:0000075,4.89e-15,7;CL:0002563,9.36e-12,9;CL:0002251,9.36e-12,9;CL:0002076,3.93e-07,15 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!6.05e-11!43;UBERON:0000344!6.76e-11!15;UBERON:0001242!8.99e-08!13;UBERON:0000060!8.99e-08!13;UBERON:0001262!8.99e-08!13;UBERON:0004786!8.99e-08!13;UBERON:0005409!1.03e-07!59;UBERON:0004923!1.87e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.07e-23,31;UBERON:0000344,1.93e-20,15;UBERON:0005409,3.07e-15,47;UBERON:0001962,2.26e-13,2;UBERON:0001961,2.26e-13,2;UBERON:0001744,2.26e-13,2;UBERON:0004923,1.38e-12,24;UBERON:0001242,1.67e-12,13;UBERON:0001262,1.67e-12,13;UBERON:0004786,1.67e-12,13;UBERON:0003350,9.36e-12,9;UBERON:0004808,9.36e-12,9;UBERON:0001277,9.36e-12,9;UBERON:0000485,1.17e-09,11;UBERON:0002465,3.19e-09,3;UBERON:0001007,7.26e-08,116;UBERON:0001555,7.26e-08,116;UBERON:0007026,7.26e-08,116;UBERON:0004119,1.05e-07,118;UBERON:0000925,1.05e-07,118;UBERON:0006595,1.05e-07,118;UBERON:0003199,1.53e-07,1 | |||
|phase1_expression=0,1.74487703819681,4.09499315450582,5.44435580352294,3.00537437967808,0,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,1.75991665072747,2.2940928106717,0,1.29228598847722,0.215471232685889,0,0.504060259519861,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,2.29911349687732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.2254949704005,1.58670339998127,0,0,0.38660238396628,1.21010114774006,0.444756087689741,0.190225626112559,2.37264530772256,0,0,0,0,0.898819408654221,2.59365659849633,4.18196673834171,0,0.114248512609729,0,0,0.387904974335251,0.210407459670956,0.316182685621286,0.147610147979602,0.784993639206874,0.987177311374404,0,0,0.196558995113203,0,0.202860121388503,0.482354319504834,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187283014939765,0,0.114870937911227,0.476293691283074,0.115884325944855,0,0,0,0.342869252385415,0,0,0,0,0,0.182927972872773,0,0,0,0,0,0,0.154936841185966,0,0,0,0,0,0,0 | |phase1_expression=0,1.74487703819681,4.09499315450582,5.44435580352294,3.00537437967808,0,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,1.75991665072747,2.2940928106717,0,1.29228598847722,0.215471232685889,0,0.504060259519861,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,2.29911349687732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.2254949704005,1.58670339998127,0,0,0.38660238396628,1.21010114774006,0.444756087689741,0.190225626112559,2.37264530772256,0,0,0,0,0.898819408654221,2.59365659849633,4.18196673834171,0,0.114248512609729,0,0,0.387904974335251,0.210407459670956,0.316182685621286,0.147610147979602,0.784993639206874,0.987177311374404,0,0,0.196558995113203,0,0.202860121388503,0.482354319504834,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187283014939765,0,0.114870937911227,0.476293691283074,0.115884325944855,0,0,0,0.342869252385415,0,0,0,0,0,0.182927972872773,0,0,0,0,0,0,0.154936841185966,0,0,0,0,0,0,0 | ||
|short_description=p2@Slc28a1 | |short_description=p2@Slc28a1 | ||
}} | }} |
Latest revision as of 04:06, 27 September 2015
Short description: | p2@Slc28a1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Slc28a1_5end |
Coexpression cluster: | MCL_coexpression_mm9:74 |
Association with transcript: | 0bp_to_ENSMUST00000026820, NM_001004184, uc009ibs.1_5end |
EntrezGene: | Slc28a1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.71e-17 | 6 |
gut absorptive cell | 1.71e-17 | 6 |
enterocyte | 1.71e-17 | 6 |
columnar/cuboidal epithelial cell | 4.89e-15 | 7 |
intestinal epithelial cell | 9.36e-12 | 9 |
epithelial cell of alimentary canal | 9.36e-12 | 9 |
endo-epithelial cell | 3.93e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.07e-23 | 31 |
mucosa | 1.93e-20 | 15 |
gastrointestinal system | 3.07e-15 | 47 |
gut-associated lymphoid tissue | 2.26e-13 | 2 |
mucosa-associated lymphoid tissue | 2.26e-13 | 2 |
lymphoid tissue | 2.26e-13 | 2 |
organ component layer | 1.38e-12 | 24 |
intestinal mucosa | 1.67e-12 | 13 |
wall of intestine | 1.67e-12 | 13 |
gastrointestinal system mucosa | 1.67e-12 | 13 |
epithelium of mucosa | 9.36e-12 | 9 |
gastrointestinal system epithelium | 9.36e-12 | 9 |
intestinal epithelium | 9.36e-12 | 9 |
simple columnar epithelium | 1.17e-09 | 11 |
lymphoid system | 3.19e-09 | 3 |
digestive system | 7.26e-08 | 116 |
digestive tract | 7.26e-08 | 116 |
primitive gut | 7.26e-08 | 116 |
endoderm-derived structure | 1.05e-07 | 118 |
endoderm | 1.05e-07 | 118 |
presumptive endoderm | 1.05e-07 | 118 |
egg chamber | 1.53e-07 | 1 |