Personal tools

FFCP PHASE1:Mm9::chr9:78328543..78328589,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=13627
|EntrezGene=13627
|HGNC=
|HGNC=
|MCL_coexpression_id=8
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=-48bp_to_ENSMUST00000126614,ENSMUST00000144523_5end
|association_with_transcript=-48bp_to_ENSMUST00000126614,ENSMUST00000144523_5end
|cluster_id=chr9:78328543..78328589,-
|description=CAGE_peak_4_at_Eef1a1_5end
|description=CAGE_peak_4_at_Eef1a1_5end
|id=chr9:78328543..78328589,-
|id=chr9:78328543..78328589,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000182,7.78e-07,5
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002107!3.20e-11!22;UBERON:0007499!3.20e-11!22;UBERON:0006925!3.20e-11!22;UBERON:0009497!3.20e-11!22;UBERON:0000015!3.20e-11!22;UBERON:0002423!3.20e-11!22;UBERON:0006235!3.20e-11!22;UBERON:0008835!3.20e-11!22;UBERON:0003894!3.20e-11!22;UBERON:0004161!3.20e-11!22;UBERON:0008836!3.20e-11!22;UBERON:0009854!3.89e-10!23;UBERON:0009856!3.89e-10!23;UBERON:0002365!4.44e-10!25;UBERON:0002330!4.44e-10!25;UBERON:0005172!9.79e-08!49;UBERON:0005173!9.79e-08!49;UBERON:0002417!9.79e-08!49;UBERON:0000916!9.79e-08!49;UBERON:0003914!1.13e-07!47;UBERON:0005256!6.59e-07!47
|ontology_enrichment_uberon_v019_2=UBERON:0002107,7.72e-21,22;UBERON:0007499,7.72e-21,22;UBERON:0006925,7.72e-21,22;UBERON:0009497,7.72e-21,22;UBERON:0000015,7.72e-21,22;UBERON:0002423,7.72e-21,22;UBERON:0006235,7.72e-21,22;UBERON:0008835,7.72e-21,22;UBERON:0003894,7.72e-21,22;UBERON:0004161,7.72e-21,22;UBERON:0008836,7.72e-21,22;UBERON:0009854,1.02e-19,23;UBERON:0009856,1.02e-19,23;UBERON:0002365,9.47e-18,25;UBERON:0002330,9.47e-18,25;UBERON:0005256,3.19e-11,45;UBERON:0003914,1.62e-10,47;UBERON:0004119,1.88e-10,118;UBERON:0000925,1.88e-10,118;UBERON:0006595,1.88e-10,118;UBERON:0000490,9.18e-10,66;UBERON:0003929,1.50e-09,55;UBERON:0001007,4.44e-09,116;UBERON:0001555,4.44e-09,116;UBERON:0007026,4.44e-09,116;UBERON:0004921,8.76e-08,114;UBERON:0003104,9.01e-08,61;UBERON:0009142,9.01e-08,61;UBERON:0005172,9.50e-08,49;UBERON:0005173,9.50e-08,49;UBERON:0002417,9.50e-08,49;UBERON:0000916,9.50e-08,49
|phase1_expression=0,1.74487703819681,1.81999695755814,0.90739263392049,0,0.33575854382378,0.700837921786577,0,4.08287294239834,3.7450324211519,0.513653904676515,0.319088635981346,0,0,0.666219523631325,1.01237633694913,0,0.315462165358238,0.137114433605739,0,0.425216450755349,0,0.522399578277871,2.07990149631429,1.83527424853736,2.8711598205751,0.86152399231815,1.72376986148711,1.14014051673824,0,1.33038306393183,0.635030673459631,1.23012957516914,0,0,0.664938581433969,0,0.418531630736908,0,0,0.588231488031014,0,0.971020706062307,0.755380907853464,1.21652317463417,1.46837401729345,0,0.436050312760893,0.659058548203415,0,0.139986421625363,0,0.503347818173209,0,0,2.05807548828758,0.85960031981627,0,0,0.528990979272033,0,1.35537812827653,0.889294796111139,0.449949858640699,0,0.7104801149461,0.299600110518405,0,0.207379224616955,0.135005938331691,0,0.571301968807607,0,0,0.191690942036473,0,0,0.383062014255563,0.614426133024974,0,0.182975287204819,0,0,0,0.61119299110724,0.294628585473668,0.427115042397309,0,7.95125029998433,1.058001841495,0.289864488701678,6.88339101585109,9.51959867190851,7.55584468292944,7.14754059192436,4.03224198387602,1.82577746171277,0.511290967734173,0.519572009205738,0.70667914902068,0,0,0,0,1.73192832808971,1.01343946190039,0.505524445014783,2.62622923353838,0,0,0.346970653532272,0,0.922461989024234,0.150722640552623,0.23517741427141,0.879666139307728,0.247194967734374,0.578397427679647,0.884610551949874,0,0.220841518460394,0,0,0,0.209446706813455,1.27728527604296,0.239630249011841,0,0.381210681219194,0.149790639404823,0,0.125654352112864,0.173824320192276,0.255715457330331,0,0.486723789203273,0.101839363850316,0.248813941220186,0.252722758433675,0.631325567659422,0.260240885925407,0.229902104433473,0.180062129805349,0,0.0680364991513279,0.12811372028485,0.0937017245597288,0,0.431135985865684,0.189106080167819,0.175951124163949,0,0,0.696504333044333,0.205782136407943,0.199034266818493,0.702213187313235,0.51469581422943,0.284163499395593,0.621377317606506,0.234526059981096,0.180062061461015,0,0.196764231747404,0.308534225774757,0.232533944750408,0,0.467061369468678,0.658239399653922,0.32833492815819,0.162137619091711,0,0,0.268412837520744,0.210289948564127,0.514523061896422,2.97376904685418,4.7601101999438,0,0,0,0,0.667134131534611,0.951128130562796,1.42358718463353,0.823494773620054,1.50801125280162,1.59165177632921,1.36474860983384,0,0.648414149624083,0,0.379335801906163,0.228497025219458,0,0.203651327845314,0.581857461502877,0.631222379012867,0.252946148497029,0.442830443938806,1.41298855057237,0.370191491765402,2.96452627087149,0.166845105716094,1.17935397067922,1.12431056192427,1.82574109249653,0.482354319504834,0.763877555344259,0.575392274901621,1.94562272130042,4.66754402419738,8.62609239164127,4.09355042435354,2.49630138491648,2.77836765741823,7.89348619496414,1.92977408545347,0,0.37898282354097,0.162964976442026,0,0.469380496577004,0,0.238043640886014,0.195133647857799,0,0,0,0,0,0,0,0.54390568381871,0,0.275936746304732,0.321101179975584,0.234423373184406,0.327869890753351,0,0.631016438832513,0,0.215423397732799,0.238968797952552,0,0.566153061577665,0,0.876767573733936,0.395287777946524,0,0.141940085208269,0,0.162886959353576,0.164970122972535,0,0,0.604647113929502,0.188605079755898,0,0.307435147943927,1.29214146584111,0,0,0.316036757935816,0,0,0,0.36012218806262,0,0.214337035031592,0.354680467284547,0,0.329098041204242,0,2.11204537257339,1.69465656691056,0.220528398054962,0,0.161464426695906,0.301564624640779,0.477489376012546,0,0.582961673259701,0.18542530201051,0.341741761595705,0.206386867963223,0.555583582109135,0.565105371014073,0.27338845544205,0,0,0.279902904647316,0,0,0.158167996790568,0.203319467126849,0.108005340821801,0.418176592028937,0.218362563746178,0.809186078308924,0.495920734352016,0,0,0.621339313086926,0,0.149516546043979,0.330916980914195,0,0,0.168956125490778,0,0.13020438484395,0.209718688851422,0,0,0,0,0.616265742988964,0.129920822977795,0,0.198681354781265,0,0.147689527174577,0,0.0762068066549998,0,0,0.192423683280659,0,0,1.55390167361845,6.19025610605382,2.01461539636894,0.19318959403219,0.187682475451182,0,0.214368379079066,0.501572104035363,0,0,0.572895513439397,0,0,0,0,0,0,0,0.207574695168353,0,0,0,0.419226325255965,0.183843508450014,0.44449345560323,0.412070114477788,0.320919209591815,0.505394423527595,1.01391719956096,0.188626341386076,0.749132059759059,0.640251524048693,0.861532034334199,1.90517476513229,0.231768651889711,0,0.824171801606613,0.441596760403192,0,0.532427418478012,0.715308569841963,0.290692833264657,0.752875043322645,0.676916863133412,0.73171189149109,0.526139422875686,0.679020569229309,0,0.237270036248348,0.788035859004508,0.409231043169689,0.309873682371932,0.385813221962283,0,0.233931608445408,0.644613162144895,0.57386499620653,0,0.695603506861264
|phase1_expression=0,1.74487703819681,1.81999695755814,0.90739263392049,0,0.33575854382378,0.700837921786577,0,4.08287294239834,3.7450324211519,0.513653904676515,0.319088635981346,0,0,0.666219523631325,1.01237633694913,0,0.315462165358238,0.137114433605739,0,0.425216450755349,0,0.522399578277871,2.07990149631429,1.83527424853736,2.8711598205751,0.86152399231815,1.72376986148711,1.14014051673824,0,1.33038306393183,0.635030673459631,1.23012957516914,0,0,0.664938581433969,0,0.418531630736908,0,0,0.588231488031014,0,0.971020706062307,0.755380907853464,1.21652317463417,1.46837401729345,0,0.436050312760893,0.659058548203415,0,0.139986421625363,0,0.503347818173209,0,0,2.05807548828758,0.85960031981627,0,0,0.528990979272033,0,1.35537812827653,0.889294796111139,0.449949858640699,0,0.7104801149461,0.299600110518405,0,0.207379224616955,0.135005938331691,0,0.571301968807607,0,0,0.191690942036473,0,0,0.383062014255563,0.614426133024974,0,0.182975287204819,0,0,0,0.61119299110724,0.294628585473668,0.427115042397309,0,7.95125029998433,1.058001841495,0.289864488701678,6.88339101585109,9.51959867190851,7.55584468292944,7.14754059192436,4.03224198387602,1.82577746171277,0.511290967734173,0.519572009205738,0.70667914902068,0,0,0,0,1.73192832808971,1.01343946190039,0.505524445014783,2.62622923353838,0,0,0.346970653532272,0,0.922461989024234,0.150722640552623,0.23517741427141,0.879666139307728,0.247194967734374,0.578397427679647,0.884610551949874,0,0.220841518460394,0,0,0,0.209446706813455,1.27728527604296,0.239630249011841,0,0.381210681219194,0.149790639404823,0,0.125654352112864,0.173824320192276,0.255715457330331,0,0.486723789203273,0.101839363850316,0.248813941220186,0.252722758433675,0.631325567659422,0.260240885925407,0.229902104433473,0.180062129805349,0,0.0680364991513279,0.12811372028485,0.0937017245597288,0,0.431135985865684,0.189106080167819,0.175951124163949,0,0,0.696504333044333,0.205782136407943,0.199034266818493,0.702213187313235,0.51469581422943,0.284163499395593,0.621377317606506,0.234526059981096,0.180062061461015,0,0.196764231747404,0.308534225774757,0.232533944750408,0,0.467061369468678,0.658239399653922,0.32833492815819,0.162137619091711,0,0,0.268412837520744,0.210289948564127,0.514523061896422,2.97376904685418,4.7601101999438,0,0,0,0,0.667134131534611,0.951128130562796,1.42358718463353,0.823494773620054,1.50801125280162,1.59165177632921,1.36474860983384,0,0.648414149624083,0,0.379335801906163,0.228497025219458,0,0.203651327845314,0.581857461502877,0.631222379012867,0.252946148497029,0.442830443938806,1.41298855057237,0.370191491765402,2.96452627087149,0.166845105716094,1.17935397067922,1.12431056192427,1.82574109249653,0.482354319504834,0.763877555344259,0.575392274901621,1.94562272130042,4.66754402419738,8.62609239164127,4.09355042435354,2.49630138491648,2.77836765741823,7.89348619496414,1.92977408545347,0,0.37898282354097,0.162964976442026,0,0.469380496577004,0,0.238043640886014,0.195133647857799,0,0,0,0,0,0,0,0.54390568381871,0,0.275936746304732,0.321101179975584,0.234423373184406,0.327869890753351,0,0.631016438832513,0,0.215423397732799,0.238968797952552,0,0.566153061577665,0,0.876767573733936,0.395287777946524,0,0.141940085208269,0,0.162886959353576,0.164970122972535,0,0,0.604647113929502,0.188605079755898,0,0.307435147943927,1.29214146584111,0,0,0.316036757935816,0,0,0,0.36012218806262,0,0.214337035031592,0.354680467284547,0,0.329098041204242,0,2.11204537257339,1.69465656691056,0.220528398054962,0,0.161464426695906,0.301564624640779,0.477489376012546,0,0.582961673259701,0.18542530201051,0.341741761595705,0.206386867963223,0.555583582109135,0.565105371014073,0.27338845544205,0,0,0.279902904647316,0,0,0.158167996790568,0.203319467126849,0.108005340821801,0.418176592028937,0.218362563746178,0.809186078308924,0.495920734352016,0,0,0.621339313086926,0,0.149516546043979,0.330916980914195,0,0,0.168956125490778,0,0.13020438484395,0.209718688851422,0,0,0,0,0.616265742988964,0.129920822977795,0,0.198681354781265,0,0.147689527174577,0,0.0762068066549998,0,0,0.192423683280659,0,0,1.55390167361845,6.19025610605382,2.01461539636894,0.19318959403219,0.187682475451182,0,0.214368379079066,0.501572104035363,0,0,0.572895513439397,0,0,0,0,0,0,0,0.207574695168353,0,0,0,0.419226325255965,0.183843508450014,0.44449345560323,0.412070114477788,0.320919209591815,0.505394423527595,1.01391719956096,0.188626341386076,0.749132059759059,0.640251524048693,0.861532034334199,1.90517476513229,0.231768651889711,0,0.824171801606613,0.441596760403192,0,0.532427418478012,0.715308569841963,0.290692833264657,0.752875043322645,0.676916863133412,0.73171189149109,0.526139422875686,0.679020569229309,0,0.237270036248348,0.788035859004508,0.409231043169689,0.309873682371932,0.385813221962283,0,0.233931608445408,0.644613162144895,0.57386499620653,0,0.695603506861264
|short_description=p4@Eef1a1
|short_description=p4@Eef1a1
}}
}}

Latest revision as of 04:22, 27 September 2015

Short description:p4@Eef1a1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Eef1a1_5end
Coexpression cluster:MCL_coexpression_mm9:8
Association with transcript: -48bp_to_ENSMUST00000126614, ENSMUST00000144523_5end
EntrezGene:Eef1a1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Eef1a1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.74
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.82
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.91
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.70
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E74.08
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F23.75
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.51
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.32
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.01
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.43
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.52
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.08
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.84
GP2+ M cell, pool1.CNhs13228.11845-124H92.87
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I21.72
Ileum epithelium, pool1.CNhs13199.10252-104B91.14
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.33
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.76
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.22
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.47
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.50
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.06
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.36
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.38
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.18
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.61
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.43
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D97.95
Mouse Schwann, donor2.CNhs12573.11746-123F91.06
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F76.88
Mouse hepatocyte, donor1.CNhs13078.11714-123C49.52
Mouse hepatocyte, donor3.CNhs12615.11637-122C87.56
Mouse hepatocyte, donor6.CNhs13090.11822-124F47.15
Mouse hepatocyte, donor8.CNhs13091.11824-124F64.03
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.83
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.73
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.01
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.63
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.88
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.58
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H71.28
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.38
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.49
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.07
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.51
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.47
heart, neonate N03.CNhs11221.1349-25I20.66
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.51
intestinal mucosa, adult.CNhs10506.860-29I32.97
intestine, adult.CNhs10496.178-9A34.76
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.95
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E90.82
intestine, neonate N06.CNhs11102.688-20B81.51
intestine, neonate N07.CNhs11095.720-20F21.59
intestine, neonate N10.CNhs11098.755-23A51.36
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G70.63
kidney, neonate N10.CNhs11206.758-6D50.25
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F31.41
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B22.96
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H61.18
liver, embryo E14.CNhs10594.409-16E11.12
liver, embryo E15.CNhs10520.433-16D71.83
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.76
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F41.95
liver, neonate N03.CNhs11123.1345-25G24.67
liver, neonate N06.CNhs11101.684-20A88.63
liver, neonate N07.CNhs11103.716-20H24.09
liver, neonate N10.CNhs11115.751-24B92.50
liver, neonate N20.CNhs11220.823-25A32.78
liver, neonate N25.CNhs11198.1368-26H17.89
liver, neonate N30.CNhs11106.1382-42D11.93
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.32
medulla oblongata, neonate N30.CNhs11200.1396-42A30.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G91.29
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I72.11
placenta, adult pregnant day17.CNhs10464.577-18G31.69
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.30
skin, neonate N06.CNhs11097.693-20I50.48
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.81
stomach, neonate N07.CNhs11210.718-18A90.50
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.62
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.55
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F76.19
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.01
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.86
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
hepatocyte7.78e-075

Uber anatomy
Ontology termp-valuen
liver7.72e-2122
epithelial sac7.72e-2122
digestive gland7.72e-2122
epithelium of foregut-midgut junction7.72e-2122
anatomical boundary7.72e-2122
hepatobiliary system7.72e-2122
foregut-midgut junction7.72e-2122
hepatic diverticulum7.72e-2122
liver primordium7.72e-2122
septum transversum7.72e-2122
liver bud7.72e-2122
digestive tract diverticulum1.02e-1923
sac1.02e-1923
exocrine gland9.47e-1825
exocrine system9.47e-1825
trunk mesenchyme3.19e-1145
epithelial tube1.62e-1047
endoderm-derived structure1.88e-10118
endoderm1.88e-10118
presumptive endoderm1.88e-10118
unilaminar epithelium9.18e-1066
gut epithelium1.50e-0955
digestive system4.44e-09116
digestive tract4.44e-09116
primitive gut4.44e-09116
subdivision of digestive tract8.76e-08114
mesenchyme9.01e-0861
entire embryonic mesenchyme9.01e-0861
abdomen element9.50e-0849
abdominal segment element9.50e-0849
abdominal segment of trunk9.50e-0849
abdomen9.50e-0849
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr9:78328543..78328589,-&oldid=4292517"