FFCP PHASE1:Mm9::chr9:89949345..89949363,+: Difference between revisions
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{{FFCP|EntrezGene=13036|HGNC=|MCL_coexpression_id=3728|UniProt=|association_with_transcript=1bp_to_ENSMUST00000127842_5end|description=CAGE_peak_2_at_Ctsh_5end|id=chr9:89949345..89949363,+|ontology_enrichment_celltype=CL:0000066!1.03e-07!25;CL:0000223!2.64e-07!20|ontology_enrichment_celltype_v019_2=CL:0000066,1.17e-07,25;CL:0000223,2.59e-07,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0009569!6.68e-14!66;UBERON:0002100!2.46e-11!98;UBERON:0005256!7.64e-11!47;UBERON:0005177!1.46e-09!85;UBERON:0005172!4.55e-09!49;UBERON:0005173!4.55e-09!49;UBERON:0002417!4.55e-09!49;UBERON:0000916!4.55e-09!49;UBERON:0002365!6.14e-09!25;UBERON:0002330!6.14e-09!25;UBERON:0009854!5.36e-08!23;UBERON:0009856!5.36e-08!23;UBERON:0002107!6.27e-08!22;UBERON:0007499!6.27e-08!22;UBERON:0006925!6.27e-08!22;UBERON:0009497!6.27e-08!22;UBERON:0000015!6.27e-08!22;UBERON:0002423!6.27e-08!22;UBERON:0006235!6.27e-08!22;UBERON:0008835!6.27e-08!22;UBERON:0003894!6.27e-08!22;UBERON:0004161!6.27e-08!22;UBERON:0008836!6.27e-08!22;UBERON:0000926!2.53e-07!193;UBERON:0004120!2.53e-07!193;UBERON:0006603!2.53e-07!193;UBERON:0003104!2.98e-07!131;UBERON:0009142!2.98e-07!131;UBERON:0001007!4.35e-07!128;UBERON:0001555!4.35e-07!128;UBERON:0007026!4.35e-07!128;UBERON:0004119!4.42e-07!130;UBERON:0000925!4.42e-07!130;UBERON:0006595!4.42e-07!130;UBERON:0000466!7.88e-07!79|ontology_enrichment_uberon_v019_2=UBERON:0002100,2.38e-14,90;UBERON:0009569,6.41e-14,66;UBERON:0005256,4.47e-12,45;UBERON:0005177,1.26e-11,79;UBERON:0003104,1.50e-11,61;UBERON:0009142,1.50e-11,61;UBERON:0005172,4.44e-09,49;UBERON:0005173,4.44e-09,49;UBERON:0002417,4.44e-09,49;UBERON:0000916,4.44e-09,49;UBERON:0002365,5.99e-09,25;UBERON:0002330,5.99e-09,25;UBERON:0001007,2.05e-08,116;UBERON:0001555,2.05e-08,116;UBERON:0007026,2.05e-08,116;UBERON:0004119,2.17e-08,118;UBERON:0000925,2.17e-08,118;UBERON:0006595,2.17e-08,118;UBERON:0009854,5.24e-08,23;UBERON:0009856,5.24e-08,23;UBERON:0002107,6.13e-08,22;UBERON:0007499,6.13e-08,22;UBERON:0006925,6.13e-08,22;UBERON:0009497,6.13e-08,22;UBERON:0000015,6.13e-08,22;UBERON:0002423,6.13e-08,22;UBERON:0006235,6.13e-08,22;UBERON:0008835,6.13e-08,22;UBERON:0003894,6.13e-08,22;UBERON:0004161,6.13e-08,22;UBERON:0008836,6.13e-08,22;UBERON:0004921,1.36e-07,114|phase1_expression=5.12476310735341,169.25307270509,212.484644794913,9.37639055051173,13.5241847085514,75.7135516322623,95.3139573629745,0.129123323441576,0,0,0,0,0,0.174840804837995,10.6595123781012,11.7435655086099,4.19737126876888,37.8554598429885,41.4085589489331,32.6780031884483,18.28430738248,0.0992909512008853,0.261199789138935,136.313544219983,172.974597924646,188.922316193842,209.781092129469,176.901882035115,6.65081968097309,4.03248207615889,139.025030180876,0,0,0,16.4645423258227,19.2832188615851,17.9669033510885,53.9905803650611,60.1628215283326,45.5465657257204,52.3526024347603,47.8131839470912,67.4859390713303,25.8088476849933,20.9850247624395,11.9305388905093,30.5132624295735,1.74420125104357,9.88587822305123,13.026803237977,26.8773929520696,5.75010257459886,41.2745210902031,0.725362142011344,0.336093799142464,20.3234954468398,11.1748041576115,12.8918023069361,0.606949382578793,0.528990979272033,1.26766280701236,11.8595586224196,16.8966011261116,72.4419272411526,87.0202399058937,84.5471336785859,45.8388169093159,51.1010346077668,1.24427534770173,0.405017814995072,0.630974884054146,3.71346279724945,7.73039893330647,0.122490799214954,0.479227355091182,1.83843757322004,1.10115880999389,2.29837208553338,1.99688493233117,0.395658863190582,0.823388792421687,0.52091337055676,2.23346399201105,1.12552522006336,3.66715794664344,3.24091444021034,4.12877874317399,0.745597783301202,0.757261933331841,1.058001841495,37.9722480199198,72.2756056664365,48.957936026958,84.7334010871373,95.5171333648074,74.8204901452551,28.7911061270091,15.8500199997594,17.9252343175979,18.0203183000274,0.704217098883403,8.98285341900225,15.2883143823987,14.2213340630666,36.370494889884,39.5241390141154,31.3425155909166,47.0437584442527,46.3498811728437,28.6493328395112,7.28638372417771,18.2679286987285,26.0595511899346,25.3214036128406,22.694620477191,25.0076516746054,151.777710188906,10.9895511259133,26.5383165584962,7.76480879747564,9.93786833071771,15.5160081003271,14.9113408974498,2.92780797011547,2.51336048176146,19.6701932510615,6.4700167233197,11.9980546198682,6.86179226194549,3.59497534571574,2.28750301409313,1.25654352112864,2.43354048269187,2.30143911597297,3.32460871295296,3.0825839982874,6.82323737797119,24.2593592689681,38.4138592819186,5.47148825304832,1.56144531555244,2.06911893990126,3.78130472591233,5.12396380641431,3.40182495756639,4.61209393025459,4.40398105430725,7.76110112217047,0.215567992932842,1.32374256117473,0.527853372491847,1.09597866213787,1.66828349535359,5.57203466435466,6.37924622864625,3.98068533636986,14.0442637462647,20.3304846620625,20.4597719564827,3.31401236056803,4.22146907965973,3.24111710629827,4.7348947117042,4.32881309844288,4.01094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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=13036 | |||
|HGNC= | |||
|MCL_coexpression_id=3728 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=1bp_to_ENSMUST00000127842_5end | |||
|cluster_id=chr9:89949345..89949363,+ | |||
|description=CAGE_peak_2_at_Ctsh_5end | |||
|id=chr9:89949345..89949363,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.03e-07!25;CL:0000223!2.64e-07!20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.17e-07,25;CL:0000223,2.59e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009569!6.68e-14!66;UBERON:0002100!2.46e-11!98;UBERON:0005256!7.64e-11!47;UBERON:0005177!1.46e-09!85;UBERON:0005172!4.55e-09!49;UBERON:0005173!4.55e-09!49;UBERON:0002417!4.55e-09!49;UBERON:0000916!4.55e-09!49;UBERON:0002365!6.14e-09!25;UBERON:0002330!6.14e-09!25;UBERON:0009854!5.36e-08!23;UBERON:0009856!5.36e-08!23;UBERON:0002107!6.27e-08!22;UBERON:0007499!6.27e-08!22;UBERON:0006925!6.27e-08!22;UBERON:0009497!6.27e-08!22;UBERON:0000015!6.27e-08!22;UBERON:0002423!6.27e-08!22;UBERON:0006235!6.27e-08!22;UBERON:0008835!6.27e-08!22;UBERON:0003894!6.27e-08!22;UBERON:0004161!6.27e-08!22;UBERON:0008836!6.27e-08!22;UBERON:0000926!2.53e-07!193;UBERON:0004120!2.53e-07!193;UBERON:0006603!2.53e-07!193;UBERON:0003104!2.98e-07!131;UBERON:0009142!2.98e-07!131;UBERON:0001007!4.35e-07!128;UBERON:0001555!4.35e-07!128;UBERON:0007026!4.35e-07!128;UBERON:0004119!4.42e-07!130;UBERON:0000925!4.42e-07!130;UBERON:0006595!4.42e-07!130;UBERON:0000466!7.88e-07!79 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,2.38e-14,90;UBERON:0009569,6.41e-14,66;UBERON:0005256,4.47e-12,45;UBERON:0005177,1.26e-11,79;UBERON:0003104,1.50e-11,61;UBERON:0009142,1.50e-11,61;UBERON:0005172,4.44e-09,49;UBERON:0005173,4.44e-09,49;UBERON:0002417,4.44e-09,49;UBERON:0000916,4.44e-09,49;UBERON:0002365,5.99e-09,25;UBERON:0002330,5.99e-09,25;UBERON:0001007,2.05e-08,116;UBERON:0001555,2.05e-08,116;UBERON:0007026,2.05e-08,116;UBERON:0004119,2.17e-08,118;UBERON:0000925,2.17e-08,118;UBERON:0006595,2.17e-08,118;UBERON:0009854,5.24e-08,23;UBERON:0009856,5.24e-08,23;UBERON:0002107,6.13e-08,22;UBERON:0007499,6.13e-08,22;UBERON:0006925,6.13e-08,22;UBERON:0009497,6.13e-08,22;UBERON:0000015,6.13e-08,22;UBERON:0002423,6.13e-08,22;UBERON:0006235,6.13e-08,22;UBERON:0008835,6.13e-08,22;UBERON:0003894,6.13e-08,22;UBERON:0004161,6.13e-08,22;UBERON:0008836,6.13e-08,22;UBERON:0004921,1.36e-07,114 | |||
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| |||
|short_description=p2@Ctsh | |||
}} |
Latest revision as of 05:59, 27 September 2015
Short description: | p2@Ctsh |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Ctsh_5end |
Coexpression cluster: | MCL_coexpression_mm9:3728 |
Association with transcript: | 1bp_to_ENSMUST00000127842_5end |
EntrezGene: | Ctsh |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.17e-07 | 25 |
endodermal cell | 2.59e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
trunk | 2.38e-14 | 90 |
subdivision of trunk | 6.41e-14 | 66 |
trunk mesenchyme | 4.47e-12 | 45 |
trunk region element | 1.26e-11 | 79 |
mesenchyme | 1.50e-11 | 61 |
entire embryonic mesenchyme | 1.50e-11 | 61 |
abdomen element | 4.44e-09 | 49 |
abdominal segment element | 4.44e-09 | 49 |
abdominal segment of trunk | 4.44e-09 | 49 |
abdomen | 4.44e-09 | 49 |
exocrine gland | 5.99e-09 | 25 |
exocrine system | 5.99e-09 | 25 |
digestive system | 2.05e-08 | 116 |
digestive tract | 2.05e-08 | 116 |
primitive gut | 2.05e-08 | 116 |
endoderm-derived structure | 2.17e-08 | 118 |
endoderm | 2.17e-08 | 118 |
presumptive endoderm | 2.17e-08 | 118 |
digestive tract diverticulum | 5.24e-08 | 23 |
sac | 5.24e-08 | 23 |
liver | 6.13e-08 | 22 |
epithelial sac | 6.13e-08 | 22 |
digestive gland | 6.13e-08 | 22 |
epithelium of foregut-midgut junction | 6.13e-08 | 22 |
anatomical boundary | 6.13e-08 | 22 |
hepatobiliary system | 6.13e-08 | 22 |
foregut-midgut junction | 6.13e-08 | 22 |
hepatic diverticulum | 6.13e-08 | 22 |
liver primordium | 6.13e-08 | 22 |
septum transversum | 6.13e-08 | 22 |
liver bud | 6.13e-08 | 22 |
subdivision of digestive tract | 1.36e-07 | 114 |