FFCP PHASE1:Mm9::chr3:108525020..108525030,-: Difference between revisions
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{{FFCP|EntrezGene=76123|HGNC=|UniProt=|association_with_transcript=3bp_to_ENSMUST00000124043_5end|description=CAGE_peak_5_at_Gpsm2_5end|id=chr3:108525020..108525030,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002102,3.71e-10,7;UBERON:0004710,3.71e-10,7;UBERON:0005419,3.71e-10,7;UBERON:0005417,3.71e-10,7;UBERON:0005729,3.71e-10,7;UBERON:0010708,9.16e-09,8;UBERON:0003102,1.76e-08,22;UBERON:0000026,3.89e-07,12;UBERON:0004708,3.89e-07,12;UBERON:0002101,3.89e-07,12;UBERON:0004357,3.89e-07,12;UBERON:0004347,3.89e-07,12;UBERON:0005732,3.89e-07,12;UBERON:0005733,3.89e-07,12|phase1_expression=1.44133962394315,0.348975407639361,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,0,0,0,0.319984845586813,0.91763712426868,0.57423196411502,0.430761996159075,0.215471232685889,0,0,0,0.635030673459631,0,0,0.577703239502549,0.498703936075477,0,0,0,0,0,0,0,0.881277725829041,0.608261587317087,1.10128051297009,0,0,0.219686182734472,0.388859798148567,0.279972843250725,0,0,0,0,0.257259436035947,0.286533439938757,0,0.202316460859598,0,0,0,0.889294796111139,0,0,0,0.299600110518405,0.384218305321555,0.311068836925433,0.540023753326763,0.210324961351382,0.571301968807607,0,0.367472397644862,0.670918297127655,0,0,0,0,0,0.0914876436024097,0,0,0,0.15279824777681,0.883885756421003,0.711858403995515,0.186399445825301,0.151452386666368,0.226714680320357,0,0,0,0,0,0.448026887097336,0.280888840263504,1.70430322578058,0.779358013808606,0.70667914902068,1.12674735821344,0,0,0,0,0,0,0,0,0,0.173485326766136,0.304465478312141,0,0,0.352766121407114,0.125666591329675,0,1.59059292611903,0,1.13236794963186,0.883366073841574,0.484875253135222,0,0.292780797011547,0,0.510914110417183,0,0,0.254140454146129,0,0,0.125654352112864,0,0.767146371990992,0,0.162241263067758,1.2220723662038,0.746441823660558,0,0,0.390361328888111,0.689706313300419,0.720248519221397,0.90422890701429,1.29269348387523,1.5373646434182,0.937017245597288,0.517406741478031,0.862271971731369,1.13463648100692,1.93546236580344,3.06874025398605,4.17070873838397,2.43776516565517,4.7329891373827,0.59710280045548,0,0.257347907114715,0,0.414251545071004,0.469052119962192,0.36012412292203,0.23674473558521,0,0.308534225774757,0,0.268273401399619,0.350296027101508,0.16455984991348,0.656669856316381,0.324275238183423,0,0.219550115291051,0,0,0.823236899034275,0,0,0.853153002140936,0.696710015581316,0.38660238396628,0.201683524623343,0.667134131534611,0.190225626112559,0.949058123089023,1.15289268306808,0.251335208800269,1.1937388322469,0.974820435595601,0.898819408654221,0.216138049874694,0.995706366271836,0.379335801906163,0.571242563048644,0,0,0.193952487167626,0.49095073923223,0.0632365371242573,0,0.156998727841375,0.123397163921801,0,0,0.196558995113203,0.224862112384854,0.202860121388503,0.964708639009667,0.50925170356284,0.287696137450811,0.324270453550071,0.274561413188081,0,0,0.312037673114561,0,0.358794827043824,0,0.554259570499814,1.13694847062291,0.814824882210129,0.848725428875941,0.704070744865506,0.335012514883631,0.952174563544055,0.195133647857799,1.10344600874334,1.7717175171902,1.91345722388985,0.81931657357869,0.863424909329478,0.289298117163023,0,1.08781136763742,1.96705709207614,0.275936746304732,0,0.468846746368813,3.44263385291018,0,1.89304931649754,0.780877488593277,1.07711698866399,1.67278158566786,0.668396022247182,0.283076530788832,0.809621403349789,1.75353514746787,1.97643888973262,0.642642632843614,0.425820255624806,0.35613120733451,1.14020871547503,1.48473110675282,0,0.728341908464944,0.302323556964751,0.754420319023592,0,0.307435147943927,0.258428293168221,0.727067458955011,0,1.26414703174326,0,0,0,0.36012218806262,0.517434735131018,0.643011105094777,0.886701168211368,0.891844088010353,0.822745103010605,0.608929898229199,0.23467170806371,0,0,0.32977250588296,2.26050197374268,1.26657142349127,1.67121281604391,1.96969079694074,0.874442509889552,0.18542530201051,0.170870880797853,0,0,0,0.136694227721025,0,0,0.139951452323658,0,0.954670618015114,0.474503990371703,0.203319467126849,0.324016022465404,0.627264888043406,0.87345025498471,1.48350781023303,0.991841468704031,0,0.648074866458964,0,0,0.299033092087958,0,0.972255941720238,0.645799117388655,0.506868376472335,0.58678619322877,0.2604087696879,0.419437377702843,0.483168241652012,0,0.632022241256357,0.202725215290164,0.410843828659309,0,0.358053391334963,0.198681354781265,0.120195449519969,0,0.403865799792591,0.15241361331,0.100826185136841,0.292373642219257,0.384847366561318,0,0,0,0.0897138566094757,0,0.19318959403219,1.31377732815827,2.01466786693992,0.857473516316263,0,0,0,0.572895513439397,0.343706364687375,0,0,0,0,0,0,0.93408612825759,1.19707462020309,0.512200817262403,1.21553358534147,0.838452650511929,0.919217542250071,0.666740183404846,0,0.64183841918363,0.252697211763798,0.50695859978048,1.13175804831646,0.561849044819294,0.89635213366817,0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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=76123 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=3bp_to_ENSMUST00000124043_5end | |||
|cluster_id=chr3:108525020..108525030,- | |||
|description=CAGE_peak_5_at_Gpsm2_5end | |||
|id=chr3:108525020..108525030,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002102,3.71e-10,7;UBERON:0004710,3.71e-10,7;UBERON:0005419,3.71e-10,7;UBERON:0005417,3.71e-10,7;UBERON:0005729,3.71e-10,7;UBERON:0010708,9.16e-09,8;UBERON:0003102,1.76e-08,22;UBERON:0000026,3.89e-07,12;UBERON:0004708,3.89e-07,12;UBERON:0002101,3.89e-07,12;UBERON:0004357,3.89e-07,12;UBERON:0004347,3.89e-07,12;UBERON:0005732,3.89e-07,12;UBERON:0005733,3.89e-07,12 | |||
|phase1_expression=1.44133962394315,0.348975407639361,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,0,0,0,0.319984845586813,0.91763712426868,0.57423196411502,0.430761996159075,0.215471232685889,0,0,0,0.635030673459631,0,0,0.577703239502549,0.498703936075477,0,0,0,0,0,0,0,0.881277725829041,0.608261587317087,1.10128051297009,0,0,0.219686182734472,0.388859798148567,0.279972843250725,0,0,0,0,0.257259436035947,0.286533439938757,0,0.202316460859598,0,0,0,0.889294796111139,0,0,0,0.299600110518405,0.384218305321555,0.311068836925433,0.540023753326763,0.210324961351382,0.571301968807607,0,0.367472397644862,0.670918297127655,0,0,0,0,0,0.0914876436024097,0,0,0,0.15279824777681,0.883885756421003,0.711858403995515,0.186399445825301,0.151452386666368,0.226714680320357,0,0,0,0,0,0.448026887097336,0.280888840263504,1.70430322578058,0.779358013808606,0.70667914902068,1.12674735821344,0,0,0,0,0,0,0,0,0,0.173485326766136,0.304465478312141,0,0,0.352766121407114,0.125666591329675,0,1.59059292611903,0,1.13236794963186,0.883366073841574,0.484875253135222,0,0.292780797011547,0,0.510914110417183,0,0,0.254140454146129,0,0,0.125654352112864,0,0.767146371990992,0,0.162241263067758,1.2220723662038,0.746441823660558,0,0,0.390361328888111,0.689706313300419,0.720248519221397,0.90422890701429,1.29269348387523,1.5373646434182,0.937017245597288,0.517406741478031,0.862271971731369,1.13463648100692,1.93546236580344,3.06874025398605,4.17070873838397,2.43776516565517,4.7329891373827,0.59710280045548,0,0.257347907114715,0,0.414251545071004,0.469052119962192,0.36012412292203,0.23674473558521,0,0.308534225774757,0,0.268273401399619,0.350296027101508,0.16455984991348,0.656669856316381,0.324275238183423,0,0.219550115291051,0,0,0.823236899034275,0,0,0.853153002140936,0.696710015581316,0.38660238396628,0.201683524623343,0.667134131534611,0.190225626112559,0.949058123089023,1.15289268306808,0.251335208800269,1.1937388322469,0.974820435595601,0.898819408654221,0.216138049874694,0.995706366271836,0.379335801906163,0.571242563048644,0,0,0.193952487167626,0.49095073923223,0.0632365371242573,0,0.156998727841375,0.123397163921801,0,0,0.196558995113203,0.224862112384854,0.202860121388503,0.964708639009667,0.50925170356284,0.287696137450811,0.324270453550071,0.274561413188081,0,0,0.312037673114561,0,0.358794827043824,0,0.554259570499814,1.13694847062291,0.814824882210129,0.848725428875941,0.704070744865506,0.335012514883631,0.952174563544055,0.195133647857799,1.10344600874334,1.7717175171902,1.91345722388985,0.81931657357869,0.863424909329478,0.289298117163023,0,1.08781136763742,1.96705709207614,0.275936746304732,0,0.468846746368813,3.44263385291018,0,1.89304931649754,0.780877488593277,1.07711698866399,1.67278158566786,0.668396022247182,0.283076530788832,0.809621403349789,1.75353514746787,1.97643888973262,0.642642632843614,0.425820255624806,0.35613120733451,1.14020871547503,1.48473110675282,0,0.728341908464944,0.302323556964751,0.754420319023592,0,0.307435147943927,0.258428293168221,0.727067458955011,0,1.26414703174326,0,0,0,0.36012218806262,0.517434735131018,0.643011105094777,0.886701168211368,0.891844088010353,0.822745103010605,0.608929898229199,0.23467170806371,0,0,0.32977250588296,2.26050197374268,1.26657142349127,1.67121281604391,1.96969079694074,0.874442509889552,0.18542530201051,0.170870880797853,0,0,0,0.136694227721025,0,0,0.139951452323658,0,0.954670618015114,0.474503990371703,0.203319467126849,0.324016022465404,0.627264888043406,0.87345025498471,1.48350781023303,0.991841468704031,0,0.648074866458964,0,0,0.299033092087958,0,0.972255941720238,0.645799117388655,0.506868376472335,0.58678619322877,0.2604087696879,0.419437377702843,0.483168241652012,0,0.632022241256357,0.202725215290164,0.410843828659309,0,0.358053391334963,0.198681354781265,0.120195449519969,0,0.403865799792591,0.15241361331,0.100826185136841,0.292373642219257,0.384847366561318,0,0,0,0.0897138566094757,0,0.19318959403219,1.31377732815827,2.01466786693992,0.857473516316263,0,0,0,0.572895513439397,0.343706364687375,0,0,0,0,0,0,0.93408612825759,1.19707462020309,0.512200817262403,1.21553358534147,0.838452650511929,0.919217542250071,0.666740183404846,0,0.64183841918363,0.252697211763798,0.50695859978048,1.13175804831646,0.561849044819294,0.89635213366817,0.459483751644906,0,0.463537303779422,0.192909220463705,0.412085900803307,1.61918812147837,1.02860775715625,0.354951612318675,0.953744759789284,1.30811774969096,0.752875043322645,0.930760686808441,0.365855945745545,0.789209134313529,0.543216455383447,2.24456908663095,0.355905054372522,0.788035859004508,1.22769312950907,0.464810523557898,1.54325288784913,0.749431733813838,0.467863216890817,1.07435527024149,2.29545998482612,2.64709702943419,1.39120701372253 | |||
|short_description=p5@Gpsm2 | |||
}} |
Latest revision as of 07:40, 27 September 2015
Short description: | p5@Gpsm2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Gpsm2_5end |
Coexpression cluster: | NA |
Association with transcript: | 3bp_to_ENSMUST00000124043_5end |
EntrezGene: | Gpsm2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
forelimb | 3.71e-10 | 7 |
pectoral appendage | 3.71e-10 | 7 |
pectoral appendage bud | 3.71e-10 | 7 |
forelimb bud | 3.71e-10 | 7 |
forelimb/pectoral fin field | 3.71e-10 | 7 |
pectoral complex | 9.16e-09 | 8 |
surface structure | 1.76e-08 | 22 |
appendage | 3.89e-07 | 12 |
paired limb/fin | 3.89e-07 | 12 |
limb | 3.89e-07 | 12 |
paired limb/fin bud | 3.89e-07 | 12 |
limb bud | 3.89e-07 | 12 |
limb/fin field | 3.89e-07 | 12 |
limb field | 3.89e-07 | 12 |