FFCP PHASE1:Mm9::chr8:112563230..112563250,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=26887 | |EntrezGene=26887 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3653 | |||
|TSSclassifier=NA | |||
|UniProt=Q9R1I1 | |UniProt=Q9R1I1 | ||
|association_with_transcript=0bp_to_ENSMUST00000109222,NM_011998,uc009njt.2_5end | |||
|cluster_id=chr8:112563230..112563250,- | |||
|description=CAGE_peak_1_at_Chst4_5end | |||
|id=chr8:112563230..112563250,- | |||
|ontology_enrichment_celltype=CL:0002563!8.48e-07!9;CL:0002251!8.48e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,6.03e-09,6;CL:0000677,6.03e-09,6;CL:0000584,6.03e-09,6;CL:0000075,1.57e-07,7;CL:0002563,2.99e-07,9;CL:0002251,2.99e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!3.06e-21!59;UBERON:0000160!4.04e-20!43;UBERON:0001007!1.50e-15!128;UBERON:0001555!1.50e-15!128;UBERON:0007026!1.50e-15!128;UBERON:0004119!1.78e-15!130;UBERON:0000925!1.78e-15!130;UBERON:0006595!1.78e-15!130;UBERON:0004921!2.97e-14!126;UBERON:0004185!2.97e-14!126;UBERON:0000344!7.80e-12!15;UBERON:0001242!3.97e-10!13;UBERON:0000060!3.97e-10!13;UBERON:0001262!3.97e-10!13;UBERON:0004786!3.97e-10!13;UBERON:0000464!4.30e-08!57;UBERON:0000481!7.21e-08!230;UBERON:0004923!8.94e-08!24;UBERON:0000485!2.07e-07!11;UBERON:0003350!8.48e-07!9;UBERON:0004808!8.48e-07!9;UBERON:0001277!8.48e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.12e-24,31;UBERON:0005409,2.47e-19,47;UBERON:0000344,9.09e-16,15;UBERON:0001242,7.92e-13,13;UBERON:0001262,7.92e-13,13;UBERON:0004786,7.92e-13,13;UBERON:0001007,5.67e-09,116;UBERON:0001555,5.67e-09,116;UBERON:0007026,5.67e-09,116;UBERON:0004119,1.17e-08,118;UBERON:0000925,1.17e-08,118;UBERON:0006595,1.17e-08,118;UBERON:0004923,1.61e-08,24;UBERON:0004921,1.21e-07,114;UBERON:0002108,1.84e-07,4;UBERON:0003350,2.99e-07,9;UBERON:0004808,2.99e-07,9;UBERON:0001277,2.99e-07,9 | |||
|phase1_expression=0.80074423552397,2.79180326111489,8.64498554840118,1.81478526784098,1.50268718983904,14.9412552001582,14.7175963575181,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,13.1193786690593,12.6175104586944,6.31655160526522,14.6459078694085,8.18790684206378,18.2422482678119,7.05684363327806,22.8382425974964,0,0,0,1.1554064790051,0.997407872150954,0.816677425049476,0,0,0,0,0,0,0,0,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44932244350839,0.860423876981386,0,0,0,0,1.54488862144927,0,0,0,0.563373679106722,0,0,0,0.649473123033642,0.506719730950197,0.505524445014783,1.94112595522402,4.66088190564909,0.29688427812965,0,0.304465478312141,0.230615497256059,0.150722640552623,0.940709657085638,0.628332956648377,0,4.62717942143717,0,0,0,0,9.31958806090611,0,0,12.7728527604296,0,0,0,0,0,0,0.173824320192276,0,0,0,1.93494791315601,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0.473489471170421,0,0.462801338662135,0.697601834251224,2.14618721119695,1.05088808130453,1.31647879930784,1.80584210487005,1.21603214318784,2.48539978623065,3.29325172936576,2.95254121272818,0,0,9.25172592354634,21.6849464664106,0,0,0.38660238396628,0.403367049246685,0.444756087689741,1.52180500890047,6.64340686162316,3.12928013975621,4.27269854960458,4.57599885694647,2.9244613067868,7.19055526923377,9.51007419448655,10.3553462092271,0.189667900953082,0,0,0.203651327845314,0,0.0701358198903186,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0.287696137450811,0.648540907100142,0,0,0.372140947668503,0.312037673114561,0.757736633841335,0.179397413521912,0.482443521363367,4.0645701836653,0,0,0,0,0.167506257441816,0.238043640886014,0.585400943573396,0.788175720530955,0.8858587585951,0.956728611944923,3.76885623846197,3.28101465545202,4.05017364028232,0,0,0,0.827810238914197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.41298144854057,3.38324646967785,3.58351310577867,1.64970122972535,2.65490276679926,0,0,0.565815239267694,1.47650946440386,1.84461088766356,1.29214146584111,0.727067458955011,1.78248689192361,0.948110273807448,0,1.03135543248187,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,5.82961673259701,0,0,0,0.185194527369712,0,0.136694227721025,0.228778173206523,0,0,0,5.72802370809068,0,0.203319467126849,0.216010681643603,0.209088296014469,0.436725127492355,0.674321731924103,1.32245529160537,1.57053565190418,8.42497326396654,0,0,0.149516546043979,0,0.194451188344048,0.258319646955462,0.506868376472335,0.469428954583016,0,0.104859344425711,0.483168241652012,0.288030006257865,0.316011120628178,0,0.102710957164827,0,0,0.198681354781265,0,0,0,0.0762068066549998,0,0,0,0,7.9355634265324,0,0,0,2.12508553435409,2.62755465631655,0.915758121336325,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412070114477788,0.320919209591815,0,0,0.188626341386076,0,0.128050304809739,0.17230640686684,0,0,0,0,0,0,0,0,0.145346416632329,0.0941093804153306,0.25384382367503,0.182927972872773,0,0,0,0,0,0,0,0.192906610981141,0,0.467863216890817,0,0.191288332068843,0,0.231867835620421 | |phase1_expression=0.80074423552397,2.79180326111489,8.64498554840118,1.81478526784098,1.50268718983904,14.9412552001582,14.7175963575181,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,13.1193786690593,12.6175104586944,6.31655160526522,14.6459078694085,8.18790684206378,18.2422482678119,7.05684363327806,22.8382425974964,0,0,0,1.1554064790051,0.997407872150954,0.816677425049476,0,0,0,0,0,0,0,0,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44932244350839,0.860423876981386,0,0,0,0,1.54488862144927,0,0,0,0.563373679106722,0,0,0,0.649473123033642,0.506719730950197,0.505524445014783,1.94112595522402,4.66088190564909,0.29688427812965,0,0.304465478312141,0.230615497256059,0.150722640552623,0.940709657085638,0.628332956648377,0,4.62717942143717,0,0,0,0,9.31958806090611,0,0,12.7728527604296,0,0,0,0,0,0,0.173824320192276,0,0,0,1.93494791315601,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0.473489471170421,0,0.462801338662135,0.697601834251224,2.14618721119695,1.05088808130453,1.31647879930784,1.80584210487005,1.21603214318784,2.48539978623065,3.29325172936576,2.95254121272818,0,0,9.25172592354634,21.6849464664106,0,0,0.38660238396628,0.403367049246685,0.444756087689741,1.52180500890047,6.64340686162316,3.12928013975621,4.27269854960458,4.57599885694647,2.9244613067868,7.19055526923377,9.51007419448655,10.3553462092271,0.189667900953082,0,0,0.203651327845314,0,0.0701358198903186,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0.287696137450811,0.648540907100142,0,0,0.372140947668503,0.312037673114561,0.757736633841335,0.179397413521912,0.482443521363367,4.0645701836653,0,0,0,0,0.167506257441816,0.238043640886014,0.585400943573396,0.788175720530955,0.8858587585951,0.956728611944923,3.76885623846197,3.28101465545202,4.05017364028232,0,0,0,0.827810238914197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.41298144854057,3.38324646967785,3.58351310577867,1.64970122972535,2.65490276679926,0,0,0.565815239267694,1.47650946440386,1.84461088766356,1.29214146584111,0.727067458955011,1.78248689192361,0.948110273807448,0,1.03135543248187,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,5.82961673259701,0,0,0,0.185194527369712,0,0.136694227721025,0.228778173206523,0,0,0,5.72802370809068,0,0.203319467126849,0.216010681643603,0.209088296014469,0.436725127492355,0.674321731924103,1.32245529160537,1.57053565190418,8.42497326396654,0,0,0.149516546043979,0,0.194451188344048,0.258319646955462,0.506868376472335,0.469428954583016,0,0.104859344425711,0.483168241652012,0.288030006257865,0.316011120628178,0,0.102710957164827,0,0,0.198681354781265,0,0,0,0.0762068066549998,0,0,0,0,7.9355634265324,0,0,0,2.12508553435409,2.62755465631655,0.915758121336325,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412070114477788,0.320919209591815,0,0,0.188626341386076,0,0.128050304809739,0.17230640686684,0,0,0,0,0,0,0,0,0.145346416632329,0.0941093804153306,0.25384382367503,0.182927972872773,0,0,0,0,0,0,0,0.192906610981141,0,0.467863216890817,0,0.191288332068843,0,0.231867835620421 | ||
|short_description=p1@Chst4 | |||
}} | }} |
Latest revision as of 12:09, 1 October 2015
Short description: | p1@Chst4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Chst4_5end |
Coexpression cluster: | MCL_coexpression_mm9:3653 |
Association with transcript: | 0bp_to_ENSMUST00000109222, NM_011998, uc009njt.2_5end |
EntrezGene: | Chst4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 6.03e-09 | 6 |
gut absorptive cell | 6.03e-09 | 6 |
enterocyte | 6.03e-09 | 6 |
columnar/cuboidal epithelial cell | 1.57e-07 | 7 |
intestinal epithelial cell | 2.99e-07 | 9 |
epithelial cell of alimentary canal | 2.99e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
intestine | 3.12e-24 | 31 |
gastrointestinal system | 2.47e-19 | 47 |
mucosa | 9.09e-16 | 15 |
intestinal mucosa | 7.92e-13 | 13 |
wall of intestine | 7.92e-13 | 13 |
gastrointestinal system mucosa | 7.92e-13 | 13 |
digestive system | 5.67e-09 | 116 |
digestive tract | 5.67e-09 | 116 |
primitive gut | 5.67e-09 | 116 |
endoderm-derived structure | 1.17e-08 | 118 |
endoderm | 1.17e-08 | 118 |
presumptive endoderm | 1.17e-08 | 118 |
organ component layer | 1.61e-08 | 24 |
subdivision of digestive tract | 1.21e-07 | 114 |
small intestine | 1.84e-07 | 4 |
epithelium of mucosa | 2.99e-07 | 9 |
gastrointestinal system epithelium | 2.99e-07 | 9 |
intestinal epithelium | 2.99e-07 | 9 |