FFCP PHASE1:Mm9::chr11:4136864..4136871,+: Difference between revisions
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{{FFCP|EntrezGene=18413|HGNC=|MCL_coexpression_id=3|UniProt=P53347|association_with_transcript=76bp_to_NM_001013365,uc007hus.2_5end|description=CAGE_peak_5_at_Osm_5end|id=chr11:4136864..4136871,+|ontology_enrichment_celltype=CL:0000988!1.11e-18!32;CL:0002032!1.11e-18!32;CL:0000037!1.11e-18!32;CL:0000566!1.11e-18!32;CL:0000837!1.11e-18!32;CL:0002320!1.20e-11!46;CL:0000134!1.20e-11!46;CL:0000084!2.65e-11!11;CL:0000827!2.65e-11!11;CL:0000049!1.90e-10!19;CL:0000219!2.02e-10!54;CL:0000838!3.02e-10!12;CL:0002031!6.93e-10!25;CL:0000542!2.36e-09!13;CL:0000051!2.36e-09!13;CL:0000624!5.02e-09!8;CL:0000738!9.33e-09!17;CL:0002087!9.33e-09!17;CL:0000893!1.46e-08!6;CL:0002489!1.46e-08!6;CL:0000898!1.46e-08!6;CL:0000809!1.46e-08!6;CL:0000810!1.46e-08!6;CL:0000895!1.46e-08!6;CL:0000808!1.46e-08!6;CL:0000894!1.46e-08!6;CL:0000806!1.46e-08!6;CL:0000807!1.46e-08!6;CL:0000805!1.46e-08!6;CL:0002425!1.46e-08!6;CL:0002436!1.46e-08!6;CL:0002427!1.46e-08!6;CL:0002428!1.46e-08!6;CL:0002429!1.46e-08!6;CL:0002433!1.46e-08!6;CL:0002431!1.46e-08!6;CL:0002432!1.46e-08!6;CL:0000034!5.60e-08!97;CL:0000791!6.04e-08!9;CL:0000789!6.04e-08!9;CL:0002420!6.04e-08!9;CL:0002419!6.04e-08!9;CL:0000790!6.04e-08!9;CL:0000063!7.57e-07!66|ontology_enrichment_celltype_v019_2=CL:0000049,1.51e-13,19;CL:0000557,9.33e-13,7;CL:0000034,7.44e-08,97;CL:0000988,8.70e-08,32;CL:0002032,8.70e-08,32;CL:0000037,8.70e-08,32;CL:0000837,8.70e-08,32|ontology_enrichment_disease=DOID:0060100!2.81e-08!3;DOID:4045!2.81e-08!3|ontology_enrichment_disease_v019_2=DOID:0060100,9.33e-18,3;DOID:4045,9.33e-18,3;DOID:0050686,3.73e-09,6|ontology_enrichment_uberon=UBERON:0002390!1.79e-17!45;UBERON:0003061!1.79e-17!45;UBERON:0002193!4.72e-16!48;UBERON:0004177!2.70e-12!29;UBERON:0002384!1.20e-11!46;UBERON:0002370!3.65e-10!23;UBERON:0000974!3.65e-10!23;UBERON:0004807!3.65e-10!23;UBERON:0005058!3.65e-10!23;UBERON:0003351!3.65e-10!23;UBERON:0009113!3.65e-10!23;UBERON:0003295!3.65e-10!23;UBERON:0009722!3.65e-10!23;UBERON:0005562!3.65e-10!23;UBERON:0007690!3.65e-10!23;UBERON:0006562!1.22e-09!24;UBERON:0003408!1.22e-09!24;UBERON:0001557!1.22e-09!24;UBERON:0001042!1.22e-09!24;UBERON:0008814!1.22e-09!24;UBERON:0009145!1.22e-09!24;UBERON:0002405!2.16e-09!70;UBERON:0000072!2.67e-08!27|ontology_enrichment_uberon_v019_2=UBERON:0002204,6.54e-08,32|phase1_expression=0,0,0,0,0,0,0,0.645616617207881,0.563154888606667,0.936258105287974,0.171217968225505,0.0797721589953364,0,0.262261207256992,0.333109761815663,0.202475267389826,0,0,0.274228867211478,0,0,0.397163804803541,0.783599367416806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.393012183581,14.0640362014284,6.80580867165938,21.1763335691165,23.2235464885872,11.1667381197165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,6.70964697233154,7.7987355029143,6.98886248901856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.12877143507205,9.52187256324446,3.6941254921427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289298117163023,1.50791283939272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.119372344003136,0,0,0,0.170870880797853,0,0.185194527369712,0,0,0.228778173206523,2.20971958992012,2.93898049879682,1.93479963326193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405450430580328,0,0.129920822977795,0,0.198681354781265,0,0,0.100966449948148,0.0762068066549998,0,0.0974578807397524,0.192423683280659,0,0,0,0,0,0,0,0,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p5@Osm}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=18413 | |||
|HGNC= | |||
|MCL_coexpression_id=3 | |||
|TSSclassifier=NA | |||
|UniProt=P53347 | |||
|association_with_transcript=76bp_to_NM_001013365,uc007hus.2_5end | |||
|cluster_id=chr11:4136864..4136871,+ | |||
|description=CAGE_peak_5_at_Osm_5end | |||
|id=chr11:4136864..4136871,+ | |||
|ontology_enrichment_celltype=CL:0000988!1.11e-18!32;CL:0002032!1.11e-18!32;CL:0000037!1.11e-18!32;CL:0000566!1.11e-18!32;CL:0000837!1.11e-18!32;CL:0002320!1.20e-11!46;CL:0000134!1.20e-11!46;CL:0000084!2.65e-11!11;CL:0000827!2.65e-11!11;CL:0000049!1.90e-10!19;CL:0000219!2.02e-10!54;CL:0000838!3.02e-10!12;CL:0002031!6.93e-10!25;CL:0000542!2.36e-09!13;CL:0000051!2.36e-09!13;CL:0000624!5.02e-09!8;CL:0000738!9.33e-09!17;CL:0002087!9.33e-09!17;CL:0000893!1.46e-08!6;CL:0002489!1.46e-08!6;CL:0000898!1.46e-08!6;CL:0000809!1.46e-08!6;CL:0000810!1.46e-08!6;CL:0000895!1.46e-08!6;CL:0000808!1.46e-08!6;CL:0000894!1.46e-08!6;CL:0000806!1.46e-08!6;CL:0000807!1.46e-08!6;CL:0000805!1.46e-08!6;CL:0002425!1.46e-08!6;CL:0002436!1.46e-08!6;CL:0002427!1.46e-08!6;CL:0002428!1.46e-08!6;CL:0002429!1.46e-08!6;CL:0002433!1.46e-08!6;CL:0002431!1.46e-08!6;CL:0002432!1.46e-08!6;CL:0000034!5.60e-08!97;CL:0000791!6.04e-08!9;CL:0000789!6.04e-08!9;CL:0002420!6.04e-08!9;CL:0002419!6.04e-08!9;CL:0000790!6.04e-08!9;CL:0000063!7.57e-07!66 | |||
|ontology_enrichment_celltype_v019_2=CL:0000049,1.51e-13,19;CL:0000557,9.33e-13,7;CL:0000034,7.44e-08,97;CL:0000988,8.70e-08,32;CL:0002032,8.70e-08,32;CL:0000037,8.70e-08,32;CL:0000837,8.70e-08,32 | |||
|ontology_enrichment_disease=DOID:0060100!2.81e-08!3;DOID:4045!2.81e-08!3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,9.33e-18,3;DOID:4045,9.33e-18,3;DOID:0050686,3.73e-09,6 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.79e-17!45;UBERON:0003061!1.79e-17!45;UBERON:0002193!4.72e-16!48;UBERON:0004177!2.70e-12!29;UBERON:0002384!1.20e-11!46;UBERON:0002370!3.65e-10!23;UBERON:0000974!3.65e-10!23;UBERON:0004807!3.65e-10!23;UBERON:0005058!3.65e-10!23;UBERON:0003351!3.65e-10!23;UBERON:0009113!3.65e-10!23;UBERON:0003295!3.65e-10!23;UBERON:0009722!3.65e-10!23;UBERON:0005562!3.65e-10!23;UBERON:0007690!3.65e-10!23;UBERON:0006562!1.22e-09!24;UBERON:0003408!1.22e-09!24;UBERON:0001557!1.22e-09!24;UBERON:0001042!1.22e-09!24;UBERON:0008814!1.22e-09!24;UBERON:0009145!1.22e-09!24;UBERON:0002405!2.16e-09!70;UBERON:0000072!2.67e-08!27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,6.54e-08,32 | |||
|phase1_expression=0,0,0,0,0,0,0,0.645616617207881,0.563154888606667,0.936258105287974,0.171217968225505,0.0797721589953364,0,0.262261207256992,0.333109761815663,0.202475267389826,0,0,0.274228867211478,0,0,0.397163804803541,0.783599367416806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.393012183581,14.0640362014284,6.80580867165938,21.1763335691165,23.2235464885872,11.1667381197165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,6.70964697233154,7.7987355029143,6.98886248901856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.12877143507205,9.52187256324446,3.6941254921427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289298117163023,1.50791283939272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.119372344003136,0,0,0,0.170870880797853,0,0.185194527369712,0,0,0.228778173206523,2.20971958992012,2.93898049879682,1.93479963326193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405450430580328,0,0.129920822977795,0,0.198681354781265,0,0,0.100966449948148,0.0762068066549998,0,0.0974578807397524,0.192423683280659,0,0,0,0,0,0,0,0,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p5@Osm | |||
}} |
Latest revision as of 12:15, 1 October 2015
Short description: | p5@Osm |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Osm_5end |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | 76bp_to_NM_001013365, uc007hus.2_5end |
EntrezGene: | Osm |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
common myeloid progenitor | 1.51e-13 | 19 |
granulocyte monocyte progenitor cell | 9.33e-13 | 7 |
stem cell | 7.44e-08 | 97 |
hematopoietic cell | 8.70e-08 | 32 |
hematopoietic oligopotent progenitor cell | 8.70e-08 | 32 |
hematopoietic stem cell | 8.70e-08 | 32 |
hematopoietic multipotent progenitor cell | 8.70e-08 | 32 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 6.54e-08 | 32 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 9.33e-18 | 3 |
muscle cancer | 9.33e-18 | 3 |
organ system cancer | 3.73e-09 | 6 |